Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1948 ATGAAGTTGGATAGGATTGAAGAAGGAAGTGTGAGGTTGTTGGGAAGTAGCAGTGGTGGGAGTAGTGAGTCTAGGTGGGTTGATGGAAGTGAAGTTGATTGGGATGAAGATCCTCCATGGTCTCATCATGGAAGGGATGGTAGAGAAGGGTATGGTTCAATTAGGAGAAGACTTGTTAAGAAACCTAAAAGGGTTGACTCTTTTGATGTTGAAGCTATGGAGATTGCTGCTGGTCATGATCAACATTCCAAGGACCTTTCCCTTTGGCCTACCATTGCATTGGCATTTCAGACTCTTGGTGTTGTATATGGTGACATGGGAACAAGTCCTCTCTATGTTTTTGCTGGTGTCTTCAGCAAGGTTCCTATTAACTCAGATGACGATGTCTTGGGGGCTTTATCGTTAGTAATGTACACGATAGCGCTTATTCCATTAGCAAAATATGTTTTTATAGTTCTCAAAGCTAATGATAATGGAGAAGGAGGAACATTTGCGCTGTACTCGCTGATTTGTAGGTATGCAAATGTGAATCTGCTTCCGAATCGCCAACAAGCTGATGAACAAATCTCTAGTTTTAAGCTCAAACTTCCTACGCCAGAACTCGAAAGGGCTTTAAAAATAAAGGAGACTTTGGAAAGGACGTCGATCATGAAAAACGTGTTGTTAGTGTTGGTTCTTCTTGGAACTTCCATGATTATTGGTGATGGTATTCTAACTCCAGCGATATCAGTGATGTCTGCCATAAGTGGTCTACAGGATCAAATAAATGGATTTGGTACAGCTGAAGTGGTTAGCATATCTATTGTAGTCCTCGTGGCTTTGTTCAGCATTCAACAGTTCGGTACTGGCAAAGTGGGTTTCATGTTCGCCCCTGTACTTGCTTTATGGTTCTTTTCTCTGGGTTCTATTGGAGTATATAATATACTTAAATACGATATTACTGTTGTGAGAGCACTCAACCCAGCATATATCTATTATTTCTTCAAGAATAATGGCAAAAGTGCATGGTCAGCTCTTGGTGGTTGTGTTCTGTGCATTACAGGTGCAGAAGCAATGTTTGCAGATCTTGGACATTTTACTGTACCAGCAATACAGATTGCTTTCACTTGTGTGGTATTTCCATGTCTCCTCCTAGCTTATATGGGCCAAGCTGCTTTTCTGATGAAAAATCCTGCTTCTTATTCAAGTGTATTCTTCAAATCTGTTCCAGAGAGTCTTTTCTGGCCAGTGTTTGTTATAGCTACACTTGGTGCTATGATTGCAAGTCAAGCAATGATATCTGCTACTTTTTCATGCGTTAAGCAATCAATGGCTTTGGGATGCTTCCCCAGGCTCAAGATAATTCATACCTCAAAAAAGTTCATGGGTCAAATTTACATACCTGTTATTAATTGGTTTTTGATGATTATGTGCATCGTTGTCGTTTCCATCTTCCAAAGCACTACAGATATTGCAAATGCATATGGCATTGCTGAAGTTGGTGTGATGATGGTTAGCACCACCTTGGTGACACTAGTGATGCTTTTAATTTGGCAGACAAACTTGTTTTTAGCATTTTGTTTCCTGCTTGTCTTTGGTTCTGTGGAGCTCATTTTCATGTCTTCAGTCTTATCGAAAATTTTCGAGGGTGGCTGGCTTCCACTTGCCTTTGCTACCTTTTTCCTCTCCGTGATGTACACGTGGAACTACGGGAGTGTATTGAAGTACCGAAGGGAAGTAAGAGAGAAAATTTCAATGGACTTAATGCTTGATCTTGGTTCCAATCTTGGAACAGTAAGAGTACCAGGAATAGGATTGCTATATAATGAGCTTGTCCAAGGTGTTCCCTCCATTTTCCTGCAGTTCCTTCTAAGCCTTCCAGCTCTTCATTCCACCGTAGTTTTTGTCTGCATTAAATATGTTCCGATTCCTGTGGTTCCTCAAGAAGAAAGATTTTTATTCCGAAGAGTTTGTCCGAAAGATTATCATATGTTCCGCTGTGTTGCTAGGTACGGTTACAAAGACGTTCGGAAGGAAGATCACCATGCATTTGAGCAACTTCTTATGGAAAGTCTTGAGAAATTCTTGAGAAGGGAAGCATTAGAAGCTGCGTTGGAGTTGGAGGGTAACTTAACCGATGATGTGGACACCGCCTCGGTGGATACAAGAAATTCTGATCTTGCAGCCGGTAATGGAGCAGAGGAGCTTAGGATGCCACTGTTGCATGGTCAGAATTTAGAAGAAACAGGAACTTCTACCTCACATGAAGGTGCGTCGACATTATTACCATCGAGTTACATGTCGTCAGATGAAGATCCTAGTCTTGAATACGAGCTTTCAGCTCTTAGAGAAGCAATGGATTCAGGATTCACCTATTTGCTTGGACATGGAGATGTGAAAGCAAAGAAGAACTCTTTTTTCTTTAAGAAATTGGTTATAAACTATTTTTATGCATTTCTAAGAAAGAACTGCAGAGGAGGTACTGCAAATATGAAAGTACCTCACACCAATATCATTCAAGTGGGGATGACATATATGGTCTGA 2523 0.4082 MKLDRIEEGSVRLLGSSSGGSSESRWVDGSEVDWDEDPPWSHHGRDGREGYGSIRRRLVKKPKRVDSFDVEAMEIAAGHDQHSKDLSLWPTIALAFQTLGVVYGDMGTSPLYVFAGVFSKVPINSDDDVLGALSLVMYTIALIPLAKYVFIVLKANDNGEGGTFALYSLICRYANVNLLPNRQQADEQISSFKLKLPTPELERALKIKETLERTSIMKNVLLVLVLLGTSMIIGDGILTPAISVMSAISGLQDQINGFGTAEVVSISIVVLVALFSIQQFGTGKVGFMFAPVLALWFFSLGSIGVYNILKYDITVVRALNPAYIYYFFKNNGKSAWSALGGCVLCITGAEAMFADLGHFTVPAIQIAFTCVVFPCLLLAYMGQAAFLMKNPASYSSVFFKSVPESLFWPVFVIATLGAMIASQAMISATFSCVKQSMALGCFPRLKIIHTSKKFMGQIYIPVINWFLMIMCIVVVSIFQSTTDIANAYGIAEVGVMMVSTTLVTLVMLLIWQTNLFLAFCFLLVFGSVELIFMSSVLSKIFEGGWLPLAFATFFLSVMYTWNYGSVLKYRREVREKISMDLMLDLGSNLGTVRVPGIGLLYNELVQGVPSIFLQFLLSLPALHSTVVFVCIKYVPIPVVPQEERFLFRRVCPKDYHMFRCVARYGYKDVRKEDHHAFEQLLMESLEKFLRREALEAALELEGNLTDDVDTASVDTRNSDLAAGNGAEELRMPLLHGQNLEETGTSTSHEGASTLLPSSYMSSDEDPSLEYELSALREAMDSGFTYLLGHGDVKAKKNSFFFKKLVINYFYAFLRKNCRGGTANMKVPHTNIIQVGMTYMV* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1948 840 MobiDBLite consensus disorder prediction 1 48 - -
Mtr8g1948 840 Pfam K+ potassium transporter 95 668 IPR003855 GO:0015079|GO:0016020|GO:0071805
Mtr8g1948 840 PANTHER POTASSIUM TRANSPORTER 12-RELATED 8 840 - -
Mtr8g1948 840 TIGRFAM kup: potassium uptake protein 94 840 IPR003855 GO:0015079|GO:0016020|GO:0071805
Mtr8g1948 840 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 8 840 IPR003855 GO:0015079|GO:0016020|GO:0071805
Mtr8g1948 840 MobiDBLite consensus disorder prediction 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1948 Mtr-Chr8 29246485 29257826 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1948 3 840 Inorganic Solute Cotransporters AT1G60160 74.026 0.0 1247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1948 K03549 - gmx:100814419 1419.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1948 8 29246485 29257826 Mtr8g1948 8 29246485 29257826 ECH
Mtr8g1948 8 29246485 29257826 Mtr5g1419 5 14888530 14894270 PCT