Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1947 ATGACATCAAGATCGTATGCTAATCTTTTAGACTTAGCTGGTGGAGACTTGCTTGATATTCCTCACACCCCAAGAAGTCTTCCAAGGGTTATGACTGTTCCTGGGATTATTTCTGACCTTGACGGTGAATCAGATGTTAGCTCTTCTGGATGTCGGGAGCGGAAAATCATTGTGGCAAACATGTTGCCGCTGCAGGCTAAAAGAGATATTGATACTGCTAAATGGTGTTTCAGTTGGGATGAGGATTCAATTCTATTACAATTAAAAGATGGGTTTTCTTCTGATACTGAGGTAATCTATGTGGGTTCCCTCAAGGTTGAGATAGATGCTAGTGAGCAGGATGAAATTGCTCAGAGATTATTGGATGACTTTAATTGCGTGGCCACCTTTCTACCCCATGACCTGCAGAAAAAGTTCTATCTTGGTTTTTGTAAGCAGCAGCTCTGGCCTCTCTTCCATTATATGCTACCCATATGCTCAGATCATGGTGATCGCTTTGACCGAGTGCTTTGGCAGGCTTATGTTTCTGCAAACAAAATATTTGCAGACAAAGTCATGGAAGTGATTGATCCCGATGATGATTTTGTTTGGGTTCATGACTACCACTTGATGATTTTGCCTACTTTCTTAAGGAAACGATTTCATCGAGTTAAACTTGGGTTTTTTCTTCACAGTCCTTTCCCGTCATCTGAAATTTACCGGACTTTGCCAGTAAGGGATGAAATTCTCAAAGGATTGTTGAATTCGGATTTAATTGGTTTTCATACATTCGATTACGCACGTCACTTTCTTTCTTGCTGCAGTAGAATGCTAGGTCTGGACTATGAATCTAAGCGCGGACATATAGGACTTGATTACTTTGGCCGCACTATATTTATCAAAATTTTGCCGGTAGGAATTCACATGGGTAGGCTTGATTCTGTATTAAATCTTCCTTCTACATCCTCTAAGCTAAAAGAGATTCAGGAAGAGTTTAAGGATAAGAAAGTTATTCTTGGTGTGGACGACATGGATATTTTTAAGGGTATCAATCTGAAATTTCTAGCTGTGGAACAGCTGCTACAGCAGAACCCAAATTTGCAGGGTGAAGTTGTCCTAGTTCAAATTATAAATCCTGCGAGGGGTTCAGGGAAGGATGTTCAGGAAGCAAAGAAAGAAGCATATTTAATTGCCAAGAGGATCAATGACATTTATGGTTCAAAACATTATCAGCCAGTCATTATCATTGACCGCTCTGTTCCTCGTTTCGAGAAGAGTGCTTATTATGCTCTAGCAGACTGTTGCATTGTCAATGCTGTAAGGGATGGAATGAACCTAGTCCCATACAAATATATTGTCTGCAGACAGGGAACTGCAAAGCTGGATGAAGCTGTGGGCAGGCAAAGTGATTCTCCTCGCACAAGCATGCTTGTTGTGTCTGAGTTCATTGGTTGCTCACCTTCTCTGAGTGGGGCCATCAGGGTCAATCCCTGGGATATAGATGCAGTTGCCGATGCTATGAATTTAGCCCTCAATATGGGGGTTTCCGAGAAGAAGTTGCGCCATGAGAAACACTATCGATATGTTAGTACTCATGATGTGGCATATTGGGCACGCAGTTTTATGCAGGATTTGGAGAGAGCCTGCAAAGATCATTACACTAAAAGGTGCTGGGGAATTGGTCTGGGCTTGGGGTTCAGAGTTATTTCACTTTCTCATGGTTTTAGGAAGCTGTCCATTGACCATATTGTATCAGCATACAAAAGAACGAGTAGAAGGGCCATCTTTCTTGATTATGATGGCACTCTTGTACCACAATCTTATATTAATAAAACCCCCAGCCCTGAAGTCGTATCTGTGCTTAATTCTCTGTGTAATGATACCAAAAATATTGTGTTCATTGTTAGTGGAAGGGCAAGAGATTCTCTGAATGAATGGTTTACATCATGCAAACTGCTGGGACTTGCAGCTGAACATGGTTACTTTTTAAGGTGGAATAGCGACTCTGAATGGGAAACAAGTCATTTGTTTGCGGATCTTGATTGGAAACAGGTGGTGCTGCCGGTCATGCAGTCGTATACAGAAGCAACTGATGGATCTAATATTGAAGTCAAGGAAAGTGCTTTGGTGTGGCATCATCAAGATGCAGACCCTGATTTTGGCTCCTGCCAAGCCAAAGAATTGCTGGACCACTTGGAAAGTGTTCTTGCTAATGAACCAGCAATTGTTAAAAGAGGCCAACATATTGTTGAAGTTAAGCCACAGGGAGTAACCAAAGGTTTGGTAGCTGAGAAGGTTCTCTTGAATATGGTTAATGCCGGTAATCCACCAGATTTCGTGATGTGCATTGGAGATGATAGGTCTGATGAAGACATGTTTGAAAGCATTTTGAGTACAGTCTCGTGCCCATCGTTACCATCAGCTCCCGAGATTTTTGCTTGCACTGTAGGTAGGAAGCCCAGCAAGGCAAAATATTTTCTTGATGACACCACCGATGTTGTAAAGTTGCTTGACGGCCTTGCTACCTCGACAAATCAAAAGCCCAAACATCTTGCCCAATTCCAGGTTTCTTTTGAGAGCACAGTTTCTTAG 2571 0.4201 MTSRSYANLLDLAGGDLLDIPHTPRSLPRVMTVPGIISDLDGESDVSSSGCRERKIIVANMLPLQAKRDIDTAKWCFSWDEDSILLQLKDGFSSDTEVIYVGSLKVEIDASEQDEIAQRLLDDFNCVATFLPHDLQKKFYLGFCKQQLWPLFHYMLPICSDHGDRFDRVLWQAYVSANKIFADKVMEVIDPDDDFVWVHDYHLMILPTFLRKRFHRVKLGFFLHSPFPSSEIYRTLPVRDEILKGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTIFIKILPVGIHMGRLDSVLNLPSTSSKLKEIQEEFKDKKVILGVDDMDIFKGINLKFLAVEQLLQQNPNLQGEVVLVQIINPARGSGKDVQEAKKEAYLIAKRINDIYGSKHYQPVIIIDRSVPRFEKSAYYALADCCIVNAVRDGMNLVPYKYIVCRQGTAKLDEAVGRQSDSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMNLALNMGVSEKKLRHEKHYRYVSTHDVAYWARSFMQDLERACKDHYTKRCWGIGLGLGFRVISLSHGFRKLSIDHIVSAYKRTSRRAIFLDYDGTLVPQSYINKTPSPEVVSVLNSLCNDTKNIVFIVSGRARDSLNEWFTSCKLLGLAAEHGYFLRWNSDSEWETSHLFADLDWKQVVLPVMQSYTEATDGSNIEVKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAIVKRGQHIVEVKPQGVTKGLVAEKVLLNMVNAGNPPDFVMCIGDDRSDEDMFESILSTVSCPSLPSAPEIFACTVGRKPSKAKYFLDDTTDVVKLLDGLATSTNQKPKHLAQFQVSFESTVS* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1947 856 CDD HAD_TPP 587 828 - -
Mtr8g1947 856 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 841 IPR001830 GO:0003824|GO:0005992
Mtr8g1947 856 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 587 788 IPR006379 -
Mtr8g1947 856 Gene3D - 715 847 IPR023214 -
Mtr8g1947 856 Gene3D - 585 695 IPR023214 -
Mtr8g1947 856 Pfam Glycosyltransferase family 20 54 539 IPR001830 GO:0003824|GO:0005992
Mtr8g1947 856 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 8-RELATED 1 841 - -
Mtr8g1947 856 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 54 543 - -
Mtr8g1947 856 Gene3D Glycogen Phosphorylase B; 307 523 - -
Mtr8g1947 856 CDD GT20_TPS 54 539 IPR001830 GO:0003824|GO:0005992
Mtr8g1947 856 TIGRFAM T6PP: trehalose-phosphatase 584 834 IPR003337 GO:0003824|GO:0005992
Mtr8g1947 856 Gene3D Glycogen Phosphorylase B; 48 306 - -
Mtr8g1947 856 Pfam Trehalose-phosphatase 589 823 IPR003337 GO:0003824|GO:0005992
Mtr8g1947 856 SUPERFAMILY HAD-like 586 834 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1947 Mtr-Chr8 29212758 29217981 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1947 1 855 Trehalose Biosynthesis Gene Families AT1G23870 74.510 0.0 1370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1947 K16055 - gmx:100775779 1548.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1947 8 29212758 29217981 Mtr8g1947 8 29212758 29217981 ECH