Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1933 ATGGCTATACCGAAATTGGTTCCGGGGTTTCGATTCTCTCCAACTGGAGTTGAATTGATCAAATATTTCCTCAAAAGGAAAGTGATGGGGAAAAAGTTTCTTAACGATGTCATTGCTGAACTTGACATATACAAATACGCACCTTGGGATCTCCCAGATTTATCTTATCTCCAAAATGGGGATTTAGAATGGTATTTCTTCTGTCCCATTGAGAAGAAGTATGGAAATGGGTCGAGGATGAATCGAGCTACGGAAATAGGGTTTTGGAAAGCTACTGGTAAGGATAGAGCTGTTCAACAGAATAATCAAACTGTGGGGATGATTAAAACACTGATATTTCATACTGGAAAAGCACCTCGTGGGGATCGTACTGATTGGGTTATGCACGAGTATAGGCTTGAAGATAAGGACCTAGCTGATAAAGGAATTGTTCAGGATTCCTACGTAATCTGTAAGGTATTTCAAAAGGAAGGTCCTGGTCCCAGGAATGGTGCACAATATGGGAGACCATTTAATGAGGAAGACTGGAGTGATGATGAAGTAGGAACACCGTTTGCTGAGCCGGCTGCACTAGCTCCCACTTTGCCTGTGACATCTAATAGTTTTGTTCTAAATGACCAGAATCTCCATGCTATTGGATATAATGGTTCAATATCCATGCCATGTCAATCCGGATTGGTGCCTTCTCCCGATCCAGCAAATTCATGTCAAACAGGATTACCGCCTTCTCCTGACCCTGCAAATTCATCTCAAATAGGATTGACGCCTTCTCCAGATCCTGTGAATTCATGTCAAACAGGATTTATGTCGTCTCCCGACCCTTCAAATGCATGTCACATAGGATTTATGTCGTCTCCTGACCCTTCAAATTCATGTCAAACAGGGTATATGCCGTATCCTGATTCTGCAAATGAATGTCAAATAGGATTTATGTCTCCCGACCCTGCAAATTCACATCAAACAGGATTGGTGCTGTCTCCCCCTGACCCTGTAAATTCACATCTAACAGGTTTGGTGCCTTCTCCCGACCCTGTGGATAATTCATATCTAGAAAATCAAGCTGTTAATACTGATAACATTTTATCAATGCTTGATATGTTCAACGACAACGACATATTGCCTGAGGAAAACATTGCTGAAGGTGCACTATCAACCGACTTTTTTGATGGTTTGGGAGACCTGGATTGCCTGGGACCTGTTGGCCAGAATGCTGACTTTAGCACATACGGTATGGCTTCTACGGGTGATGACTACTTGGATTTCATGGAGTTGATTGATCTAGACTCCGAGATGTTCTGGCAGAGTGCTGCTGAACCTAAGTTGGACCCAAAATAA 1335 0.4262 MAIPKLVPGFRFSPTGVELIKYFLKRKVMGKKFLNDVIAELDIYKYAPWDLPDLSYLQNGDLEWYFFCPIEKKYGNGSRMNRATEIGFWKATGKDRAVQQNNQTVGMIKTLIFHTGKAPRGDRTDWVMHEYRLEDKDLADKGIVQDSYVICKVFQKEGPGPRNGAQYGRPFNEEDWSDDEVGTPFAEPAALAPTLPVTSNSFVLNDQNLHAIGYNGSISMPCQSGLVPSPDPANSCQTGLPPSPDPANSSQIGLTPSPDPVNSCQTGFMSSPDPSNACHIGFMSSPDPSNSCQTGYMPYPDSANECQIGFMSPDPANSHQTGLVLSPPDPVNSHLTGLVPSPDPVDNSYLENQAVNTDNILSMLDMFNDNDILPEENIAEGALSTDFFDGLGDLDCLGPVGQNADFSTYGMASTGDDYLDFMELIDLDSEMFWQSAAEPKLDPK* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1933 444 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 301 430 - -
Mtr8g1933 444 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 245 - -
Mtr8g1933 444 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Mtr8g1933 444 MobiDBLite consensus disorder prediction 223 256 - -
Mtr8g1933 444 Gene3D NAC domain 15 158 IPR036093 GO:0003677|GO:0006355
Mtr8g1933 444 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Mtr8g1933 444 SUPERFAMILY NAC domain 3 156 IPR036093 GO:0003677|GO:0006355
Mtr8g1933 444 PANTHER PLANT NAC DOMAIN PROTEIN 301 430 - -
Mtr8g1933 444 PANTHER PLANT NAC DOMAIN PROTEIN 1 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1933 Mtr-Chr8 29064978 29068014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1933 1 263 NAC Transcription Factor Family AT5G09330 51.311 1.24e-89 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr8g1933 NAM 4.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1933 - - mtr:MTR_8g093580 679.478