Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1932 ATGGCATCACCATCTCAAAACTTTGCATCCAAGTTAACAGCACTTGTTGTGGATGATGATGCAATGACCCGAAGAATTCATCAAATGACGTTGAGTAACTTAGGAGTTAACAACACTTGTGTGAAAAACGGAAAAGAAGCAGTGGAAATTCATCAGTATGGTAAAAAATTTGACCTAATCCTGATGGATAAGGATATGCCTGAGATGAATGGAACTGAGGCAACAAAGCAACTACGCTTGATGGGGATATCTAGCACCATTGTTGGTGTATCTTCACACTCTATGGAAGAGAAGGAAATAGTGGTAAAATTTATGGAAGCAGGACTCGACGAATATCTAGAGAAACCATTGGATAAGGCAAAACTCAATTCCATTCTTCATGCCGTTGAAAAAATAAAAGAAAAAGAAAATTCCATTCCTCACAAGATTGAATGA 435 0.377 MASPSQNFASKLTALVVDDDAMTRRIHQMTLSNLGVNNTCVKNGKEAVEIHQYGKKFDLILMDKDMPEMNGTEATKQLRLMGISSTIVGVSSHSMEEKEIVVKFMEAGLDEYLEKPLDKAKLNSILHAVEKIKEKENSIPHKIE* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1932 144 PANTHER TWO-COMPONENT RESPONSE REGULATOR 5 132 - -
Mtr8g1932 144 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 5 132 - -
Mtr8g1932 144 ProSiteProfiles Response regulatory domain profile. 13 130 IPR001789 GO:0000160
Mtr8g1932 144 SUPERFAMILY CheY-like 10 135 IPR011006 -
Mtr8g1932 144 Pfam Response regulator receiver domain 15 125 IPR001789 GO:0000160
Mtr8g1932 144 SMART REC_2 12 126 IPR001789 GO:0000160
Mtr8g1932 144 CDD REC_hyHK_CKI1_RcsC-like 15 126 - -
Mtr8g1932 144 Gene3D - 1 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1932 Mtr-Chr8 29054339 29054932 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1932 12 126 Response Regulator Gene Family AT3G04280 49.138 1.54e-31 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr8g1932 Response_reg 5.8e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1932 - - rcu:8262779 152.14