Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1925 ATGCCATTTGGTTTGGTCTCAGCTTGGAACAAACGGCGGCGAAGCAAGTCTCGAGATCATTCAGACCCTTGGATTTATAAACCTGCAGAGGTTTGGCAACTTGAAGATCAAACACCACAACCTACTAAAAGGAGGCATGGATCAAATGTTTTCACACTCAAGGAGATGGAAAGTGCAACATATTCATTCAGTGATGATAATCTTATCGGAAAAGGAGGATTTGGAAGGGTCTACAAGGGCACTTTGAAGTCAGGAGAGGTTGTAGCAATAAAGAAAATGGAAATGCCTGCAATTGAGGGAGAGCGTGAATTTCGTGTAGAAGTTGACATATTAAGCAGGCTCGACCACCCAAATCTTGTTTCTTTGATAGGGTATTGTGCTGATGGGAAGCATAGATTCCTAGTATATGAATATATGCAAAATGGAAACCTGCAAGATCATTTGAATGGAATCAGGGAAAGAAAAATGGATTGGCCTGAAAGACTAAGAGTGGCATTAGGAGCTGCAAAAGGGCTTGCTTATCTTCACTCAAGTTCTTGTGTTGGAATTCCTATTGTTCATAGAGATTTCAAATCCACCAATGTTCTTTTAGATTCCAATTTTGAAGCAAAGATATCAGATTTCGGGTTTGCAAAGCTAATGCCAGAAGGACAAGAGATACATGTAACTGCCGGAGTACTCGGCACATTTGGGTATTTTGACCCCGAGTATACATCGACTGGGAAACTAACTCTACAAAGTGATGTTTATGCTTATGGTGTTGTTCTTCTGGAGCTTTTGACAGGACGTCGCGCTGTAGATCTAAACCAGGGTCCAAATGATCAAAACCTTGTACTACAGGTTAGGCACTTATTGAATGACGGCAAGATGATCCGTAAGATGATTGATGCAGAGATGGCTCGAAATTCTTACACCATTGAATCAATATCCATGTTTGCCAATCTTGCATCGCGATGTGTCCATCCTGAGAGTAACGAGAGACCTTCAATGAAAGATTGTGTCAAAGAAATTCAAATGATTATCTATACAAATACAAAAGGCTTGGGAATGGTTATGCATAGCTTAAGAATGCTCTAG 1077 0.4058 MPFGLVSAWNKRRRSKSRDHSDPWIYKPAEVWQLEDQTPQPTKRRHGSNVFTLKEMESATYSFSDDNLIGKGGFGRVYKGTLKSGEVVAIKKMEMPAIEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMQNGNLQDHLNGIRERKMDWPERLRVALGAAKGLAYLHSSSCVGIPIVHRDFKSTNVLLDSNFEAKISDFGFAKLMPEGQEIHVTAGVLGTFGYFDPEYTSTGKLTLQSDVYAYGVVLLELLTGRRAVDLNQGPNDQNLVLQVRHLLNDGKMIRKMIDAEMARNSYTIESISMFANLASRCVHPESNERPSMKDCVKEIQMIIYTNTKGLGMVMHSLRML* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1925 358 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
Mtr8g1925 358 Pfam Protein kinase domain 64 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1925 358 ProSiteProfiles Protein kinase domain profile. 63 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1925 358 PIRSF ILK 27 349 - -
Mtr8g1925 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Mtr8g1925 358 Gene3D Phosphorylase Kinase; domain 1 30 138 - -
Mtr8g1925 358 SUPERFAMILY Protein kinase-like (PK-like) 39 343 IPR011009 -
Mtr8g1925 358 Gene3D Transferase(Phosphotransferase) domain 1 139 349 - -
Mtr8g1925 358 PANTHER OS01G0750732 PROTEIN 1 357 - -
Mtr8g1925 358 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 357 - -
Mtr8g1925 358 CDD STKc_IRAK 69 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1925 Mtr-Chr8 29001175 29003432 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1925 46 341 Receptor kinase-like Gene Family AT3G58690 46.179 2.51e-89 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Mtr8g1925 Pkinase 4.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1925 - - gmx:100819242 632.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1925 8 29001175 29003432 Mtr8g1925 8 29001175 29003432 ECH