Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1914 ATGATTGAAGAGCAATTGCCGGCAATTCTCATGCCACTGTCCAGCACCTCCGACTGCGAGCTCCTCTGCGGGGAGGACTCGTCGGAGGTCCTCACCGGAGATTTACCGGAATGCTCCTCCGACCTGGATTCATCATCATCATCGCAGTTGCCGTCGTCGTCATTATTTGCCGAGGAAGAGGAGGAGTCGATTGCTGTTTTCATCGAGCACGAGTTCAAGTTTGTTCCTGGTTTCGACTACGTCTCAAGATTCCAATCTCGCTCTCTCGAATCCAGCACCAGAGAAGAAGCCATTGCATGGATTCTCAAGGTACATGAGTATTATGGATTTCAGCCGTTAACGGCGTACCTCTCCGTTAACTATATGGATCGGTTTTTGGATTCTCGACCTTTACCGGAATCAAATGGATGGCCACTGCAACTTTTATCTGTTGCATGTTTGTCTTTAGCAGCAAAGATGGAGGAACCACTGGTTCCTTCTCTCTTAGACTTTCAGATTGAAGGTGCCAAATACATATTTCAACCAAGGACGATTCTTAGAATGGAGCTGCTTGTTCTGACTATTTTGGATTGGAGGCTGAGATCAATCACCCCACTTAGTTTCCTCAGTTTCTTTGCGTGCAAGCTAGATTCAACTGGAACTTTCACCCACTTCATAATTTCACGTGCTACAGAAATCATCTTATCTAATATCCAAGATGCTAGCTTTCTTACTTACAGGCCATCATGCATTGCTGCAGCTGCCATACTCTCTGCAGCTAATGAAATTCCTAATTGGTCTTTTGTTAATCCTGAGCATGCTGAATCATGGTGTGAAGGACTAAGCAAAGAAAAAATTATAGGGTGCTATGAATTGATTCAAGAAATTGTAAGTAGCAATAACCAAAGAAATGCCCCTAAAGTGTTGCCACAGTTGCGAGTTACAGCTCGGACCAGAAGGTGGTCCACTGTCTCGTCGTCGTCATCATCTCCATCTTCCTCCTCTTCACCCTCTTTCTCGTTGTCTTATAAAAAGAGGAAATTAAATAGCTGTTTCTGGGTAGATGTTGACAAAGGAAACTCAGAGTGA 1068 0.4448 MIEEQLPAILMPLSSTSDCELLCGEDSSEVLTGDLPECSSDLDSSSSSQLPSSSLFAEEEEESIAVFIEHEFKFVPGFDYVSRFQSRSLESSTREEAIAWILKVHEYYGFQPLTAYLSVNYMDRFLDSRPLPESNGWPLQLLSVACLSLAAKMEEPLVPSLLDFQIEGAKYIFQPRTILRMELLVLTILDWRLRSITPLSFLSFFACKLDSTGTFTHFIISRATEIILSNIQDASFLTYRPSCIAAAAILSAANEIPNWSFVNPEHAESWCEGLSKEKIIGCYELIQEIVSSNNQRNAPKVLPQLRVTARTRRWSTVSSSSSSPSSSSSPSFSLSYKKRKLNSCFWVDVDKGNSE* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1914 355 SUPERFAMILY Cyclin-like 197 295 IPR036915 -
Mtr8g1914 355 Pfam Cyclin, N-terminal domain 64 193 IPR006671 -
Mtr8g1914 355 ProSitePatterns Cyclins signature. 94 125 IPR006671 -
Mtr8g1914 355 PANTHER CYCLINS 22 331 IPR039361 -
Mtr8g1914 355 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 22 331 - -
Mtr8g1914 355 SUPERFAMILY Cyclin-like 55 193 IPR036915 -
Mtr8g1914 355 SMART cyclin_7 99 187 IPR013763 -
Mtr8g1914 355 Gene3D - 68 260 - -
Mtr8g1914 355 Pfam Cyclin, C-terminal domain 196 306 IPR004367 -
Mtr8g1914 355 Gene3D - 77 194 - -
Mtr8g1914 355 MobiDBLite consensus disorder prediction 317 336 - -
Mtr8g1914 355 CDD CYCLIN 93 186 IPR013763 -
Mtr8g1914 355 SMART Cyclin_C_2 196 328 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1914 Mtr-Chr8 28919786 28923123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1914 11 347 Core Cell Cycle Gene Families AT1G70210 58.112 9.47e-127 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1914 K18810 - gmx:100778578 483.796