Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1904 ATGGCTTTCAATAGTATGATCATTCTTTTCTGTCTTGTTTTTCATATTTTTTCATTACAAACATGTTATTGCCAAAACAATTCTCCACAAAACATAGAAACTTTTTATCCAAATCAAACTTCACCCTCATCACCACCAACAAATCAACCACCAAAGGCACAACCACCCTCACTACCACCTCAAGGACCAATTGCGGTATCGAAAAGTAGTTCATCAAATGGTGGTAAGATAGCAAAGTTTGTGGCTGCAACTGCAGCCATCACTATAGTTATTTGTGGTTTGATCTTTATTTTAGCTAAAAGGTGTTTAAGAAAAAGAAAGAGATCAGGAGAGATAAATAACATTGCTTCTGATGGAGATAGGCAACAAGTTGTTGTGCCTAAAGGGAATGTTTTTGAAAGAATTGACGGAAATGTGAGAGGATTAATTGTTGATGAAGATGGTTTAGATGTGATTTATTGGAGAAAACTTGAAGAGAAGAATTCCAACAAGGATCTTTATAAAAATGTGTTGAATAGTCCTAAAAACAAAGAAGTTGGAGAAGATAGTCATGAAGAAAATCAAGTGAAAAAATCTAAGTCCATTCAAGAAATACCTCTTCTTAGAGGAAAATCTTCAGCTTCACACATATTTCAAGAAGAGGATGATCTATATAGAATTCCAAGAATTCAATCTCAACCATCCACAAATGATGGTGTTCAGAAACAAGGCTTTCAATCTCAACCATCCATTCTACCATCAATTTCAGCAGCTGCAGCACCACCTGCACCTCCTCCAATACCAGCTAGGAAGAGTCAGGCACCACCACCACCTCCTCCAATGAAGACAAGTATTTTGACTTCATCATCAAAAGCTATTCCTCAAAGCAATCAAAGAAACTCTTCAGGGAAAGGCATGATGCAAGAATCCAACAATGATCAAGTGAAATTGAAGCCTTTGCATTGGGATAAAGTGAACACTAATGCTGCTGATCATTCCATGGTTTGGGACAAAGTCGATCGCGGTTCGTTCAGGGTTGATCAAGATCTTATGGAAGCTCTCTTTGGTTATGTTGCAACAAACCGAAAATCACCTCAGCAAAAGACTCATTCAACAACTCCAAGCAATGATGCCTCAACAAATATTTTCCTTCTTGATCCTAGAAAATCACAGAACATTGCTATTGTGTTGAAATCACTAGCCGTCCCACGAGGCGAAATTCTTGATGCACTCATTGATGGAAAAGGCCTAAATGCAGATACACTTGAAAAGCTTTCTAGACTTTCACCAACAGAAGAAGAGAAATCTCTTGTCCTTGATTATAAAGAAGATCCAGCAAAACTTGCTGCAGCAGAATCATTTTTATATTACATCCTTAAAGCCGTTCCTTCGGCTTTTAAGCGCTTGAATGCGATGCTATTCAGGGTGAACTATGACTCAGAGGTTATGGAAATCAACGATTCTTTGCAAATCATTGAATTGGGATGTAAAGAACTTAGAAGTCAAGGGCTTTTTTTGAAGCTTCTAGAAGCAGTTCTGAAGGCCGGGAATCGAATGAATGATGGAACTTCTAGAGGTAATGCTCAAGCGTTTAACTTGAATTCACTAAGGAAACTCAATGATGTCAAAAGCAACAATGGAAAAACCACATTACTTCACTTTGTAGTTGAAGAAGTAGTCCAATCTGAAGGAAAACGTGCCGTTCTTAACCGGAATAGCAGCCTAACCCGAAATATCAGTCAAAACAGAAGCAGCAACATGTATGGCAACTTAGAAACAAATGTTGTTTCAGATGAAAGAAAAGAAAGGGAATACAAAATGTTAGGACTATCAATTGTAGGAGGAATAAGTTCTGAATTTTCCAATGTTAAAAAAGCAGCAAATATGGATTATAATAGTTTAATTGGTTCAATTTCAGCACTATCTGTTAAGCTAATTGAGATTCAAGAACTTGTTTCACAGTGTGAGAATGGTGAGAGAGGAAATTTTGTGAAAGAAATGAACCATTTTATTGGAAATGCTGCGGAAGAATTGAAACTAGTGAGGGAAAAAGAAACAAGTGTGTTGCAGATTCTTAGTAAAACAAAACAGTATTATGAATGTGGGGGTTCAAAAGAGAAAGAAGAAAATAATCTTCAACTATTTGGTATAGTTAAGGATTTCTTGGGAATGGTTGATCAGGTTTGCATTGAAATTGCACTTGACATGCAGAAGAAGAATCCTAAGAGGTATCAGAACAAATAA 2223 0.368 MAFNSMIILFCLVFHIFSLQTCYCQNNSPQNIETFYPNQTSPSSPPTNQPPKAQPPSLPPQGPIAVSKSSSSNGGKIAKFVAATAAITIVICGLIFILAKRCLRKRKRSGEINNIASDGDRQQVVVPKGNVFERIDGNVRGLIVDEDGLDVIYWRKLEEKNSNKDLYKNVLNSPKNKEVGEDSHEENQVKKSKSIQEIPLLRGKSSASHIFQEEDDLYRIPRIQSQPSTNDGVQKQGFQSQPSILPSISAAAAPPAPPPIPARKSQAPPPPPPMKTSILTSSSKAIPQSNQRNSSGKGMMQESNNDQVKLKPLHWDKVNTNAADHSMVWDKVDRGSFRVDQDLMEALFGYVATNRKSPQQKTHSTTPSNDASTNIFLLDPRKSQNIAIVLKSLAVPRGEILDALIDGKGLNADTLEKLSRLSPTEEEKSLVLDYKEDPAKLAAAESFLYYILKAVPSAFKRLNAMLFRVNYDSEVMEINDSLQIIELGCKELRSQGLFLKLLEAVLKAGNRMNDGTSRGNAQAFNLNSLRKLNDVKSNNGKTTLLHFVVEEVVQSEGKRAVLNRNSSLTRNISQNRSSNMYGNLETNVVSDERKEREYKMLGLSIVGGISSEFSNVKKAANMDYNSLIGSISALSVKLIEIQELVSQCENGERGNFVKEMNHFIGNAAEELKLVREKETSVLQILSKTKQYYECGGSKEKEENNLQLFGIVKDFLGMVDQVCIEIALDMQKKNPKRYQNK* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1904 740 PANTHER FORMIN-RELATED 1 738 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Mtr8g1904 740 SUPERFAMILY Formin homology 2 domain (FH2 domain) 254 726 - -
Mtr8g1904 740 MobiDBLite consensus disorder prediction 277 304 - -
Mtr8g1904 740 MobiDBLite consensus disorder prediction 248 304 - -
Mtr8g1904 740 SMART it6_source 300 733 IPR015425 -
Mtr8g1904 740 MobiDBLite consensus disorder prediction 34 72 - -
Mtr8g1904 740 MobiDBLite consensus disorder prediction 43 62 - -
Mtr8g1904 740 Pfam Formin Homology 2 Domain 303 718 IPR015425 -
Mtr8g1904 740 PANTHER FORMIN-LIKE PROTEIN 1 738 - -
Mtr8g1904 740 MobiDBLite consensus disorder prediction 175 192 - -
Mtr8g1904 740 Gene3D Formin, FH2 domain 321 740 IPR042201 -
Mtr8g1904 740 MobiDBLite consensus disorder prediction 251 276 - -
Mtr8g1904 740 MobiDBLite consensus disorder prediction 173 194 - -
Mtr8g1904 740 ProSiteProfiles Formin homology-2 (FH2) domain profile. 300 740 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1904 Mtr-Chr8 28783499 28786566 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1904 5 732 FH2 protein (formin) Gene Family AT1G70140 45.087 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1904 - - gmx:100781860 824.698