LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr8g1883	ATGGAACCGCAGACTGGCCCTTCGGCCTTCGCCACTTCTTCCATCCACAAGCGCAAACACCTGTCCGAGGATCACTCGCCTCCATTCCACCCTTCTTGCGACTCTTCGATGCACAACTTCACCGGTTCTGTCAACAGTTTGGCCACTACTTCCGGTTCTGTCCCCGACTTTGTGGTTAAGGACGAAGCCGCAACAAATATATTCACTGAAAACTTGCAGATAAGAGGTGGTTACAGTGCCAGGGAAGAGAGTCTTAAGAAAGAGGAAGAATCTGGATTACTCAAATTTGTATGCGTGTGCAATGATGGTGTTGATGACCATATGGTTTCGTTGATAGCATTAAAGAATATATTTGCCAGACAACTTCCCAATATGCCAAAGGAGTACATTGTCCGACTTATTATGGATAGGAACCATAAGTCTATAATGGTTATAAGGGAGCCTAATCGCGTTGTTGGAGGCGTTACATATCGTCCATATGCAAATCAGAGGTTCGCTGAGATAGCCTTTTGTGCAATTAGTGATGATCGACAAGTAAAAGGTTATGGTACCAGATTGATGAATCACTTGAAACAGTATGCACGTGATGTAGATGGACTGACACATTTTCTCACGTATGCTGATAATAATGCTATTGGCTATTTCATCAAACAAGGTTTTACAAAAGAGATTCACTTGGAGAAAGATCGATGGGAAGGTTATATAAAGGATTATGATGGGGGAACTCTCATGGAATGTAAGCTTGATCCAAAGATTCCTTATACTGATTTAACAACTATGATCCGTCGGCAAAGACAGGCACTATTTGAAAAGATTAGAGAACTATCAAACTGTCACAATATTGTTTATGCTGGAATTGATTTTCAGAAGAGATCAGAAGATGGAGTTATTCCTAATAGAATTGTTGATGACATCCCTGGTTTGAAAGAGGCTAAATGGACTCCTGATATGTACGGTCACTCGCGGTTTAGAGCTTTAGATGGTTCTACTGACCATGCTACAAACCTAAAACATTTAACTGAGTTTATGCGGTCAATTCTAAAGGAAATGCATGATCACCCTGATGCTTGGCCATTTAAGGAGCCTGTTGATGCACTGAGTGTTCCTGGTTATTATGAAATCATCAAGAATCCGATGGATCTAAAGACAATGAGTGAGAGGCTGGAGTCAGAACAATATTACGTCACATTTGAGATGTTTCTCGCGGATGCCAGAAGAATGTTTGAGAATGCACGAACCTATAATCCTCCAAAAACCATATATTACAAATGTGCTACAAGACTAGAAGCACACTTTCAAAGCAAAGTGACAACACTCCTACAGTCTGGCTTCAAAATTCAGTAG	1344	0.41	MEPQTGPSAFATSSIHKRKHLSEDHSPPFHPSCDSSMHNFTGSVNSLATTSGSVPDFVVKDEAATNIFTENLQIRGGYSAREESLKKEEESGLLKFVCVCNDGVDDHMVSLIALKNIFARQLPNMPKEYIVRLIMDRNHKSIMVIREPNRVVGGVTYRPYANQRFAEIAFCAISDDRQVKGYGTRLMNHLKQYARDVDGLTHFLTYADNNAIGYFIKQGFTKEIHLEKDRWEGYIKDYDGGTLMECKLDPKIPYTDLTTMIRRQRQALFEKIRELSNCHNIVYAGIDFQKRSEDGVIPNRIVDDIPGLKEAKWTPDMYGHSRFRALDGSTDHATNLKHLTEFMRSILKEMHDHPDAWPFKEPVDALSVPGYYEIIKNPMDLKTMSERLESEQYYVTFEMFLADARRMFENARTYNPPKTIYYKCATRLEAHFQSKVTTLLQSGFKIQ*	448

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr8g1883	447	CDD	Bromo_gcn5_like	339	439	-	-
	Mtr8g1883	447	ProSitePatterns	Bromodomain signature.	356	414	IPR018359	-
	Mtr8g1883	447	ProSiteProfiles	Bromodomain profile.	351	422	IPR001487	GO:0005515
	Mtr8g1883	447	SMART	bromo_6	332	441	IPR001487	GO:0005515
	Mtr8g1883	447	PRINTS	Bromodomain signature	354	367	IPR001487	GO:0005515
	Mtr8g1883	447	PRINTS	Bromodomain signature	368	384	IPR001487	GO:0005515
	Mtr8g1883	447	PRINTS	Bromodomain signature	403	422	IPR001487	GO:0005515
	Mtr8g1883	447	PANTHER	BNAC04G26160D PROTEIN	46	447	-	-
	Mtr8g1883	447	SUPERFAMILY	Bromodomain	332	440	IPR036427	GO:0005515
	Mtr8g1883	447	Pfam	Bromodomain	343	426	IPR001487	GO:0005515
	Mtr8g1883	447	Gene3D	-	90	255	-	-
	Mtr8g1883	447	Gene3D	-	329	445	IPR036427	GO:0005515
	Mtr8g1883	447	CDD	NAT_SF	144	196	-	-
	Mtr8g1883	447	Pfam	Acetyltransferase (GNAT) family	128	220	IPR000182	GO:0016407
	Mtr8g1883	447	MobiDBLite	consensus disorder prediction	1	34	-	-
	Mtr8g1883	447	ProSiteProfiles	Gcn5-related N-acetyltransferase (GNAT) domain profile.	101	249	IPR000182	GO:0016407
	Mtr8g1883	447	SUPERFAMILY	Acyl-CoA N-acyltransferases (Nat)	116	255	IPR016181	-
	Mtr8g1883	447	PANTHER	GH11602P	46	447	IPR037800	GO:0004402

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr8g1883	Mtr-Chr8	28546184	28547527	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	GNAT	Mtr8g1883		Acetyltransf_1	6.8e-12	CL0257

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr8g1883	K06062		-	gmx:100791610	637.106