Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1879 ATGATGAAGGGATGGGATGGGATTCAATCCTCGTCTCGTTCTTCTACTCGAACGAGTTCCACGATCAGCAATCGAGTTCCTTCTCAAACGGTTCGACTCGGACGTGTTCAACCTCAGGCTCCTTCTTATCGCACCATTTTCTGTAACGATCGTGAAGCTAATTTTCCTGTTCGATTCAAGGGAAATTCAATATCGACTACAAAATACAATTTTTTCACCTTTCTCCCAAAAGGATTATTTGAACAGTTCAGACGGGTGGCTAATCTCTACTTTCTTACAATCTCAATTTTGTCAACCACCCCAATTAGTCCTGTCTCTCCAATAACTAATGTGCTTCCTCTATCTTTGGTGCTTCTCGTTTCTCTTATAAAGGAAGCTTTTGAGGACTGGGTTAAGCAGGATGGGTTCTTTCCTGCAGATTTGATTTTCTTGGCTAGTACAAATGTTGATGGTGTCTGCTACATTGAGACTGCTAATTTGGATGGGGAGACCAATTTGAAGATTAGGAAAGCATTGGAAAAAACCTGGGATTACCTGACTCCAGAGAAGGCATCCGAGTTTAAAGGTGAAATTCAGTGTGAGCAACCAAACAATTCCCTGTATACATTTACTGGAAATCTTTTGATTCAAAAGCAAACACTTCCCCTCAGTCCAAACCAAATTCTTTTGCGAGGATGCAGTCTCAGAAATACAGAGTATATTGTTGGTGTTGTTATTTTTACAGGACAAGAAACAAAGGTGATGATGAATTCAATGAATGTTCCTTCCAAAAGAAGTACATTGGAGAGGAAACTTGACAAGCTCATACTTGCTCTTTTTGCAACACTCTTTATGATGTGCTTTATTGGAGCCATAGGCAGTGCTATTTTCGTGAACAAAAAATACTTTTACTTGCATCTTGACTCATCAGAGGAGGGCTCGGCACAGTTCAATCCAGGAAACAGATTTCTGGTTTTTATTCTGACTATGTTTACCCTTATCACACTGTATTCAACAATCATCCCAATCTCACTTTATGTGTCTATAGAGATGATAAAATTTATTCAATCAACTCAATTTATCAACAAGGATTTGGGCATGTACCACAAAGAAAGCAATACACCGGCATTGGCCAGAACCTCAAATCTGAATGAAGAACTTGGACAGGTGGAGTATATTTTCTCCGACAAAACTGGGACCCTAACAAGAAACTTAATGGAGTTCTTCAAATGTTCGATTGGAGCAGAGGTCTATGGAAATGGTGTGACCGAAATTGAGAGGGGACTAGCAGAGCGCAATGGCATGAAAATTGAGGAAAATAGATCGCCCAATGCTGTGCAAGAGAGGGGTTTCAATTTTGAAGATGCCAGGCTTATGAGAGGAGCTTGGAGGAATGAGCCCAATCCCGATGCATGCAAAGAATTCTTCAGATGCCTTGCTATATGCCATACTGTACTTCCGGAAGGTGATGAGAAGTCCCCTGAAAAGATCAAATATCAAGCTGCATCACCCGATGAGGCTGCTTTGGTTATTGCTGCAAAGCACTTTGGTTTCTTCTTCTACAGGCGCACACCTACAATGATATATGTTCGAGAATCTCATGTTGAGAAGATGGGAAAAGTTCAAGATATACCCTATGAGATTCTCAATGTGCTTGAATTTAATAGTACAAGGAAGCGCCAGTCAGTTGTATGTCGTTATCCAGATGGAAGGCTTGTACTATACTGTAAGGGTGCTGATACTGTAATCTATGAGAGACTGGCTGATTCTAATAGCGATATGAAGAAAATCACCAGGGAGTACTTGGAGCAATTTGGATCATCTGGACTACGTACATTATGCCTGGCTTACAGAGAATTGCATCCAAATGTTTATGAAAGCTGGAATGAGAAGTTTATCCAGGCCAAGTCTACTCTACATGATCGTGAAAAGAAGTTAGACGAGGTGGCAGAACTCATAGAAAATAATCTCATTTTAATTGGTAGCACTGCAATAGAAGACAAGCTTCAAGAGGGAGTACCAGCATGCATAGAGACTCTTCAAAGAGCTGGTATTAAAATTTGGGTTCTGACAGGGGACAAGATTGAAACAGCAATTAACATAGCCTATGCATGCAATTTGATAAACAATGAAATGAAGCAGTTCGTTATCAGTTCAGAAACTGATGCAATTAGAGAAGTTGAAGACAGGGGTGACCAAGTGGAAATTGCACGATTTATTAAAGAAGAAGTGAAAAGACAGCTGAAGAAATGCCTCGAGGAAGCACAAAGCTATTTTCACACTGTATCTGGACCAAAATTAGCACTAGTAATTGATGGAAAGTGTCTAATGTATGCATTGGATCCAACTTTAAGGGTGATGTTGCTCAATCTTAGTTTGAATTGTCATGCGGTTGTTTGCTGCCGGGTTTCTCCCTTACAAAAAGCACAGGTCACAAGTATGGTGAAGAAAGGTGCCAAGAAAATAACCCTTAGTATTGGTGATGGAGCCAATGATGTAAGCATGATTCAAGCTGCTCATGTTGGTGTTGGCATAAGTGGAATGGAGGGAATGCAAGCTGTGATGGCTAGTGATTTTGCCATTGCACAATTCCGTTACCTTGAAGATTTGCTTCTTGTTCACGGCCGCTGGTCATATTTGCGAATATGCAAGGTGGTGATATACTTCTTTTACAAGAATCTCACATTTACTCTTACTCAGTTTTGGTTTACTTTTCAAACTGGGTTTTCTGGTCAAAGGTTCTATGATGATTGGTTTCAGTCTTTATATAATGTTATTTTCACGGCATTGCCTGTGATCATGGTTGGATTATTTGACAAGGATGTTAGTGCATCTCTATCCAAGAAGTATCCTGAATTATACATGGAAGGAATAAGAAATGTCTTCTTCAAATGGAAAGTCGTGGCTATATGGGCCTTTTTTTCTGTATACCAGTCGCTAATATTCTTCTATTTTGTGAGTACTACAAATTTAAGTGCAAAAAACTCAGATGGCAAGACATTTGGACTCTGGGATGTCAGTACAATGGCATTCACTTGTGTTGTAGTAACCGTCAACTTGAGATTACTTATGATTTGTAACTCAATCACAAGATGGCACTACATTAGTGTTGGTGGAAGCATATTAGCTTGGTTCATTTTTATTTTTATATATTCAGGGATCACCACTCCTTATGATCGACAGGAGAATGTTTATTTTGTCATATATGTCTTGATGAGTACCGTATATTTCTACATAACACTACTACTTGTTCCCGTTGCTGCGCTTTTCTGCGACTTTGTTTATCAAGGGGTTCAAAGATGGTTCTTCCCCTATGATTATCAGATTGTTCAAGAAATACATAGACATGAGATTGAGAGCACTGGTAGGGCACAGCTGCTGGAGATAGGGAACCACCTTACGCCAACTGAGGCAAGGAGCTATGCCATATCTCAACTCCCACGAGAGTTATCAAAGCACACCGGATTTGCTTTCGATTCACCTGGTTACGAGTCCTTTTTCGCTGCACAGCTTGGCGCATATGCTCCACCAAAGGCATGGGATGTTGCTAGACGAGCTAGCATGAAATCACGGCCCAAGACTGAGCAGCAAAAGTAA 3576 0.4032 MMKGWDGIQSSSRSSTRTSSTISNRVPSQTVRLGRVQPQAPSYRTIFCNDREANFPVRFKGNSISTTKYNFFTFLPKGLFEQFRRVANLYFLTISILSTTPISPVSPITNVLPLSLVLLVSLIKEAFEDWVKQDGFFPADLIFLASTNVDGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGEIQCEQPNNSLYTFTGNLLIQKQTLPLSPNQILLRGCSLRNTEYIVGVVIFTGQETKVMMNSMNVPSKRSTLERKLDKLILALFATLFMMCFIGAIGSAIFVNKKYFYLHLDSSEEGSAQFNPGNRFLVFILTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLGMYHKESNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGAEVYGNGVTEIERGLAERNGMKIEENRSPNAVQERGFNFEDARLMRGAWRNEPNPDACKEFFRCLAICHTVLPEGDEKSPEKIKYQAASPDEAALVIAAKHFGFFFYRRTPTMIYVRESHVEKMGKVQDIPYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADTVIYERLADSNSDMKKITREYLEQFGSSGLRTLCLAYRELHPNVYESWNEKFIQAKSTLHDREKKLDEVAELIENNLILIGSTAIEDKLQEGVPACIETLQRAGIKIWVLTGDKIETAINIAYACNLINNEMKQFVISSETDAIREVEDRGDQVEIARFIKEEVKRQLKKCLEEAQSYFHTVSGPKLALVIDGKCLMYALDPTLRVMLLNLSLNCHAVVCCRVSPLQKAQVTSMVKKGAKKITLSIGDGANDVSMIQAAHVGVGISGMEGMQAVMASDFAIAQFRYLEDLLLVHGRWSYLRICKVVIYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIMVGLFDKDVSASLSKKYPELYMEGIRNVFFKWKVVAIWAFFSVYQSLIFFYFVSTTNLSAKNSDGKTFGLWDVSTMAFTCVVVTVNLRLLMICNSITRWHYISVGGSILAWFIFIFIYSGITTPYDRQENVYFVIYVLMSTVYFYITLLLVPVAALFCDFVYQGVQRWFFPYDYQIVQEIHRHEIESTGRAQLLEIGNHLTPTEARSYAISQLPRELSKHTGFAFDSPGYESFFAAQLGAYAPPKAWDVARRASMKSRPKTEQQK* 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1879 1191 SFLD C1.7: P-type atpase like 369 870 - -
Mtr8g1879 1191 SUPERFAMILY Calcium ATPase, transduction domain A 131 248 IPR008250 -
Mtr8g1879 1191 SUPERFAMILY HAD-like 375 861 IPR036412 -
Mtr8g1879 1191 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 792 898 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr8g1879 1191 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 131 1105 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Mtr8g1879 1191 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 132 1187 - -
Mtr8g1879 1191 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 15 131 - -
Mtr8g1879 1191 SUPERFAMILY Calcium ATPase, transmembrane domain M 58 1097 IPR023298 -
Mtr8g1879 1191 ProSitePatterns E1-E2 ATPases phosphorylation site. 389 395 IPR018303 -
Mtr8g1879 1191 Gene3D - 520 651 IPR023299 GO:0000166
Mtr8g1879 1191 SFLD p-type atpase 369 870 IPR044492 -
Mtr8g1879 1191 Gene3D - 652 859 IPR023214 -
Mtr8g1879 1191 Pfam Cation transport ATPase (P-type) 483 579 - -
Mtr8g1879 1191 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 438 657 IPR023299 GO:0000166
Mtr8g1879 1191 Gene3D - 130 252 - -
Mtr8g1879 1191 PRINTS P-type cation-transporting ATPase superfamily signature 387 401 - -
Mtr8g1879 1191 PRINTS P-type cation-transporting ATPase superfamily signature 819 838 - -
Mtr8g1879 1191 Pfam Phospholipid-translocating ATPase N-terminal 46 110 IPR032631 -
Mtr8g1879 1191 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 15 131 - -
Mtr8g1879 1191 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 132 1187 - -
Mtr8g1879 1191 MobiDBLite consensus disorder prediction 7 34 - -
Mtr8g1879 1191 CDD P-type_ATPase_APLT_Dnf-like 61 979 - -
Mtr8g1879 1191 Pfam Phospholipid-translocating P-type ATPase C-terminal 847 1097 IPR032630 -
Mtr8g1879 1191 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1879 Mtr-Chr8 28464927 28488542 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1879 12 1190 Primary Pumps ATPases AT1G59820 76.910 0.0 1974
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1879 K14802 - gmx:100815547 2175.98