Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1878 ATGACGATGTCATCATCTTCTTCAGGCGGAGGAGCATTCAGATTACGTTGGGATGTGTTTTTGAGTTTCCGAGGAGAAGATACTCGCGAATGTTTCACCAAAAAACTGTATGAATCATTACACAAACAAGGTGTTCGTGCTTTCATGGATGATGAGGGTTTGGACCGTGGGGACCACATAGCTACCACTCTTCTTGAAGCCATTGATGACTCTGCTGCTTCCATTGTTATCATTTCACCTAACTATGCTGATTCTCATTGGTGTCTTGATGAACTCAACAGGATTTGTGATCTTGAAAGGCTTATTATTCCTGTTTTCTATAAGGTTGATCCATCTCATGTCAGGAAACAATTGGGTCCTTTTCAAGATGGGTTTAATTATCTTGAAAAGAGGTTTGCAAATGAAAAAGATAAAATTTTGAAGTGGAGAGACTCTATGCTTAAAATAGGTGGTCTTGCTGGCTTTGTTTTCAATTCTAGTGATGATGGCGATCATGAGAATCTGATACGTCGTTTGGTGAAAAGGGTTTTGAAGGAGTTGAGTAATACTCCAATGGTTGTGTCTGAGTTTGCTGTGGGGATCAATGAACGTGTTGAGAAGGTGATAAATTTGTTACAACTCCAATCCAACAATGTCAAGGTTTTGGGGTTGTATGGGATGGGTGGTGTTGGCAAGACAACCCTTGCTAAGGCTCTCTTCAATAGTTTTGTTGGTCGTTTCGAGCGTAGATGCTTCATATCAAATGTGAGACAATTTGCATCTAAAGATGATGGTTTGGTTTCTATTCAAAACAATATTATTAAAGATCTTTCTTCTCAAGAAGGAACTCGGAGTTTTATCAGTGATGTCAAAGTTGGTATTTCTACTATCAAAAGAATAGTTCGTGAAAATCGAGTTCTGTTAGTGTTGGATGATGTTGATCATGTTAATCAGCTTGATGCTTTGATTGGTAAAAGGGAATGGTTTCATGAAGGAAGCTGTATAATAATTACAACAAGAGATACAACTGTTTTGCCTGAAAAACATGTCAATGAGTTGTATGAAGTTACAGAATTGTATGCTGAAGAAGCTCTAGAGTTATTCAGTTACCATGCATTGAGGAAAAAGGATCCTCCACCAGACTTTCTGAGTTTTTCAAAGCAAATTGTGTCTCTTACGGGAAGAATGCCATTGGCTTTGGAAGTGTTTGGTTGCTTTCTGTTTGGTAAGAGAAGGGTGGACGAATGGGAGGATGTTGTTAAGAAGCTGAAAACTATTCGCCCTGGGAATCTTCATGATGTGTTGAAGATAAGTTATGATGGGTTGGACGAACAAGAGAAATGTATATTCCTTGATATTGCATGTTTCTTTGTTCAGATGGGCATGAAGCGCGACGATGTGATTGATGTATTGAGAGGCTGTGGTTTTAGAGGAGAGATAGCCACGACGGTCCTTGTAGAAAAATGCTTAATCAAAGTAAGAGAGGACAATACCTTGTGGATGCATGATCAAATTAGGGATATGGGAAGACAGATTGTTCTTGATGAAAACCATGTTGATCCTGGGATGCGTAGCAGATTGTGGGATCGTGCTGAAATCATGTCTGTTTTGAAGAGTAAGAAGGGAACAAGATGCATACAAGGAATTGTACTAGACTTCAAGGAAAGATCAAACCAGTGGAGTAAAAATTATCCTCCTCAACCTCAAGCAGAGAAATATAACCAAGTTATGCTTGATACAAAATCGTTTGAACCGATGGTTAGCTTGAGGTTGCTTCAGATCAATAATCTGAGTTTGGAAGGTAAGTTTCTTCCGGATGAACTGAAGTGGCTACAATGGCGAGGATGTCCTTTAGAATGCATATCTTTGGACACTTTGCCACGTGAACTGGCCGTCCTTGATCTCTCAAATGGCCAGAAAATTAAAAGCTTGTGGGGATTGAAAAGTCAAAAGGTACCAGAGAACCTAATGGTCATGAACCTCTCCAACTGCTACCAACTTGCTGCAATCCCTGATTTATCTTGGTGTCTCGGCCTAGAAAAAATTAATTTGGCGAACTGCATTAATCTAACAAGGATTCATGAATCCATTGGCAGTTTAACTACTTTGCGTAATTTGAATTTGACACGTTGTGAAAACTTGATTGAACTTCCTAGTGATGTATCTGGACTGAAACATCTGGAGAGCCTCATTCTTTCTGAATGCTCCAAGTTAAAAGCATTACCAGAAAACATAGGCATGCTTAAATCACTGAAAACCCTTGCTGCTGATAAAACTGCCATAGTAAAGTTGCCCGAGTCCATTTTTCGCTTGACCAAACTTGAACGACTTGTTTTAGATCGTTGCTCACATTTGAGAAGACTACCAGACTGCATTGGAAAACTATGTGCTTTGCAAGAATTATCTCTTTATGAAACAGGTTTACAAGAATTACCCAACACTGTCGGTTTCTTGAAAAACCTTGAGAAATTAAGTTTGATGGGGTGTGAAGGTCTCACTCTAATGCCTGATTCTATAGGAAATCTCGAATCGTTGACAGAACTTTTGGCTTCCAACAGTGGGATTAAAGAACTCCCTTCCACCATTGGTTCTTTATCCTATCTGAGGACTTTACTAGTTAGAAAGTGTAAACTCAGTAAATTGCCCGACTCGTTTAAAACTCTGGCCTCAATTATTGAACTTGACTTAGATGGAACTTATATCAGATATCTGCCAGATCAGATTGGAGAGTTGAAACAACTTAGGAAACTTGAGATTGGGAATTGTAGCAATCTTGAATCATTACCGGAATCCATTGGCTACCTAACATCTCTTAATACACTGAACATAATCAATGGAAATATCAGAGAATTGCCAGTGTCGATTGGATTATTGGAAAATCTTGTTAACTTAACATTGAGCAGATGTAGAATGCTTAAACAGCTTCCAGCTTCTATAGGAAACCTGAAGTCTCTATGTCATTTAAAGATGGAGGAAACAGCTATGGTAGACTTGCCTGAAAGTTTCGGTATGCTCTCAAGCTTGAGAACACTCAGAATGGCAAAGAGGCCTCATTTAGTTCCAATATCAGTGAAGAACACTGGCTCTTTTGTGTTACCGCCTTCTTTCTGTAATCTGACCTTGCTACATGAGTTGGATGCCCGTGCCTGGAGATTATCGGGAAAAATTCCGGACGATTTCGAGAAGCTATCACTATTAGAGACTTTAAAGTTGGACCAAAACAATTTTCACAGCCTTCCTTCTAGCTTGAAAGGCCTTTCCATTCTCAAGGAACTCTCACTGCCAAATTGCACGGAGCTGATTTCTCTCCCCTTACTTCCTTCAAGCTTGATCAAGCTAAATGCTAGTAATTGCTATGCATTAGAAACTATACACGACATGTCAAGTTTAGAGAGTTTGGAGGAGTTGGAACTCACAAATTGCGAGAAAGTGGCTGATATTCCAGGTCTTGAATGCTTGAAGTCTTTGAAAAGATTGTACCTGAGCGGTTGCAATGCATGCTCCTCCAAAGTATGCAAAAGACTTTCAAAGGTTGCACTGAGAAATTTTGAGAACTTGAGCATGCCAGGAACCAAGTTACCTGAATGGTTTTCAGGAGAAACTGTAAGCTTTTCCAATCGCAAAAATCTCGAGCTAACAAGTGTAGTTGTAGGTGTTGTTGTTTCAATTAACCACAATATTCATATACCTATAAAGAGAGAAGAAATGCCTGGAATCATTGATGTTGAAGGAAAAGTCTTCAAACATGGGAAACAAAAGTTTGGTACAACGTTAAACATTCGTGGGGTGCCAAGGACAAATGTAGATCACATACACTTGTGTAGGTTCCAGAATTACCATCAATTAGTAGCCTTTTTAAAAGATGCTGATACATTTTGTGTGACTACGAGAAGTCCTCCTTTTGATAAAGGATTGAGGTTGAAGAAATGCGGAGTTTATTTAATCTTTGAAGGGGATGATGATTATGATGGAGATGAAGAATCGTTGGACAAAGGTTTACAATCTGTTTCAGAAAGGTTGGCCAGGTTTTTTAACACTTGCAATGAAGGTGTCGATGCTACCTGTGCCACTGAGAGTGAAGATGAGTGTCAACATGAATTGGAGCACGAAAATGGAGAGCCTGGAACTAGATCACTTCGTGTTGAAGGCAATTACATTATTCTCTGCCTGTTTAGTCTATTATTTCTGTTGTTTAGTTGGTTTTGGTTGAGGTGTATGCCAAGTGCTGAAAGAAAAGATTGA 4221 0.3926 MTMSSSSSGGGAFRLRWDVFLSFRGEDTRECFTKKLYESLHKQGVRAFMDDEGLDRGDHIATTLLEAIDDSAASIVIISPNYADSHWCLDELNRICDLERLIIPVFYKVDPSHVRKQLGPFQDGFNYLEKRFANEKDKILKWRDSMLKIGGLAGFVFNSSDDGDHENLIRRLVKRVLKELSNTPMVVSEFAVGINERVEKVINLLQLQSNNVKVLGLYGMGGVGKTTLAKALFNSFVGRFERRCFISNVRQFASKDDGLVSIQNNIIKDLSSQEGTRSFISDVKVGISTIKRIVRENRVLLVLDDVDHVNQLDALIGKREWFHEGSCIIITTRDTTVLPEKHVNELYEVTELYAEEALELFSYHALRKKDPPPDFLSFSKQIVSLTGRMPLALEVFGCFLFGKRRVDEWEDVVKKLKTIRPGNLHDVLKISYDGLDEQEKCIFLDIACFFVQMGMKRDDVIDVLRGCGFRGEIATTVLVEKCLIKVREDNTLWMHDQIRDMGRQIVLDENHVDPGMRSRLWDRAEIMSVLKSKKGTRCIQGIVLDFKERSNQWSKNYPPQPQAEKYNQVMLDTKSFEPMVSLRLLQINNLSLEGKFLPDELKWLQWRGCPLECISLDTLPRELAVLDLSNGQKIKSLWGLKSQKVPENLMVMNLSNCYQLAAIPDLSWCLGLEKINLANCINLTRIHESIGSLTTLRNLNLTRCENLIELPSDVSGLKHLESLILSECSKLKALPENIGMLKSLKTLAADKTAIVKLPESIFRLTKLERLVLDRCSHLRRLPDCIGKLCALQELSLYETGLQELPNTVGFLKNLEKLSLMGCEGLTLMPDSIGNLESLTELLASNSGIKELPSTIGSLSYLRTLLVRKCKLSKLPDSFKTLASIIELDLDGTYIRYLPDQIGELKQLRKLEIGNCSNLESLPESIGYLTSLNTLNIINGNIRELPVSIGLLENLVNLTLSRCRMLKQLPASIGNLKSLCHLKMEETAMVDLPESFGMLSSLRTLRMAKRPHLVPISVKNTGSFVLPPSFCNLTLLHELDARAWRLSGKIPDDFEKLSLLETLKLDQNNFHSLPSSLKGLSILKELSLPNCTELISLPLLPSSLIKLNASNCYALETIHDMSSLESLEELELTNCEKVADIPGLECLKSLKRLYLSGCNACSSKVCKRLSKVALRNFENLSMPGTKLPEWFSGETVSFSNRKNLELTSVVVGVVVSINHNIHIPIKREEMPGIIDVEGKVFKHGKQKFGTTLNIRGVPRTNVDHIHLCRFQNYHQLVAFLKDADTFCVTTRSPPFDKGLRLKKCGVYLIFEGDDDYDGDEESLDKGLQSVSERLARFFNTCNEGVDATCATESEDECQHELEHENGEPGTRSLRVEGNYIILCLFSLLFLLFSWFWLRCMPSAERKD* 1407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1878 1406 Pfam TIR domain 17 184 IPR000157 GO:0007165
Mtr8g1878 1406 PRINTS Disease resistance protein signature 214 229 - -
Mtr8g1878 1406 PRINTS Disease resistance protein signature 293 307 - -
Mtr8g1878 1406 PRINTS Disease resistance protein signature 386 400 - -
Mtr8g1878 1406 PRINTS Disease resistance protein signature 902 918 - -
Mtr8g1878 1406 Gene3D - 15 178 IPR035897 -
Mtr8g1878 1406 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 154 IPR035897 -
Mtr8g1878 1406 Gene3D Ribonuclease Inhibitor 735 842 IPR032675 -
Mtr8g1878 1406 Gene3D Ribonuclease Inhibitor 843 1019 IPR032675 -
Mtr8g1878 1406 SUPERFAMILY L domain-like 876 1188 - -
Mtr8g1878 1406 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 1298 IPR044974 GO:0006952
Mtr8g1878 1406 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 446 IPR027417 -
Mtr8g1878 1406 SMART till_3 16 152 IPR000157 GO:0007165
Mtr8g1878 1406 Gene3D - 352 436 IPR042197 -
Mtr8g1878 1406 Gene3D - 179 345 IPR027417 -
Mtr8g1878 1406 SMART LRR_typ_2 881 904 IPR003591 -
Mtr8g1878 1406 SMART LRR_typ_2 788 811 IPR003591 -
Mtr8g1878 1406 SMART LRR_typ_2 1056 1078 IPR003591 -
Mtr8g1878 1406 SMART LRR_typ_2 928 951 IPR003591 -
Mtr8g1878 1406 SMART LRR_typ_2 741 764 IPR003591 -
Mtr8g1878 1406 SMART LRR_typ_2 835 858 IPR003591 -
Mtr8g1878 1406 SUPERFAMILY L domain-like 493 898 - -
Mtr8g1878 1406 Gene3D Ribonuclease Inhibitor 564 734 IPR032675 -
Mtr8g1878 1406 ProSiteProfiles TIR domain profile. 15 160 IPR000157 GO:0007165
Mtr8g1878 1406 Gene3D Ribonuclease Inhibitor 1020 1222 IPR032675 -
Mtr8g1878 1406 PANTHER TMV RESISTANCE PROTEIN N-LIKE 14 1298 - -
Mtr8g1878 1406 CDD AAA 192 334 - -
Mtr8g1878 1406 Pfam NB-ARC domain 196 422 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1878 Mtr-Chr8 28447091 28453727 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1878 17 865 WRKY Transcription Factor Family AT4G12020 29.792 4.56e-76 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1878 - - mtr:MTR_8g062130 2730.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1878 8 28447091 28453727 Mtr8g1878 8 28447091 28453727 ECH