Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1869 ATGGCAAAGAGTGATGTGAAGCTTATTGGCAAATGGTCAAGTCCTTATGTGACAAGGGTGAAGATTGCCCTTAACATCAAATCCCTTGAATATGAAAACTTTGAAGAGAATGAAACCTTTAACCCCAAAAGTGATATTCTTCTTCAATCCAACCCTGTTTATGGCAAAGTCCCAGTGCTTATTCACAAAGATAAACCAATATCTGAGTCTCTCATCATTGTTGAATATATAGATGAAACATGGTCCAGTGCTCCTTCCATTCTCCCTTCTGATACTTATGATAGAGCAGTTGCTAGATTCTGGGCTGCTTATATAGATCAAAAGTGGTTTCCTCCTATGCAAAGCATAATTACTGTTGAAGGAGAGGATGAAAGGAAGCCATATTTTGAAGTATTGGAAGAAGTGGTTGAGAGGATGGAGGAAGCTTTTGAAAAATGCAGCAAAGGAAAACCCTTTTTTGGTGGTGATAGGATTGGTTATCTTGATATTGCATTTGGGAGTTTTTTGGGATGGCTTAGTGTGATTGAGCATGAGTATGAAAGGAAAGTGTTGGTTGAAGAAAAGGCTCCTAATTTGGTGAAATGGGCTGAGAGATTTGCTTCTGACCCTGCTGTGAAGGGGCTTATACCTGAGACTGAGAGACTTGTTAAGCTTTCTAAAGCTCTTCAGATCAAGTGGAGAGCTGCTATTTGCAAGAAATAG 702 0.3946 MAKSDVKLIGKWSSPYVTRVKIALNIKSLEYENFEENETFNPKSDILLQSNPVYGKVPVLIHKDKPISESLIIVEYIDETWSSAPSILPSDTYDRAVARFWAAYIDQKWFPPMQSIITVEGEDERKPYFEVLEEVVERMEEAFEKCSKGKPFFGGDRIGYLDIAFGSFLGWLSVIEHEYERKVLVEEKAPNLVKWAERFASDPAVKGLIPETERLVKLSKALQIKWRAAICKK* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1869 233 Pfam Glutathione S-transferase, N-terminal domain 5 79 IPR004045 -
Mtr8g1869 233 Gene3D - 88 230 - -
Mtr8g1869 233 SUPERFAMILY Thioredoxin-like 5 110 IPR036249 -
Mtr8g1869 233 Pfam Glutathione S-transferase, C-terminal domain 101 203 IPR004046 -
Mtr8g1869 233 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 85 IPR004045 -
Mtr8g1869 233 CDD GST_C_Tau 93 222 IPR045074 GO:0004364|GO:0006749
Mtr8g1869 233 SFLD Glutathione Transferase (cytosolic) 2 228 IPR040079 -
Mtr8g1869 233 SFLD Main.3: Omega- and Tau-like 2 228 IPR045073 -
Mtr8g1869 233 Gene3D Glutaredoxin 1 87 - -
Mtr8g1869 233 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 228 IPR010987 -
Mtr8g1869 233 SUPERFAMILY GST C-terminal domain-like 87 219 IPR036282 -
Mtr8g1869 233 CDD GST_N_Tau 6 81 - -
Mtr8g1869 233 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 219 IPR045073 -
Mtr8g1869 233 PANTHER GLUTATHIONE S-TRANSFERASE U17 4 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1869 Mtr-Chr8 28367850 28369441 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1869 1 222 Glutathione S-transferase Gene Family AT1G10370 59.641 3.49e-91 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1869 K00799 - cam:101508281 394.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1869 8 28367850 28369441 Mtr8g1869 8 28367850 28369441 ECH
Mtr5g1521 5 16280330 16281813 Mtr8g1869 8 28367850 28369441 PCT