Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1861 ATGTCAAATACTGTTGAATCCTATTTATCACATTACATAATTATACCAAAAAAAGGAAAAAGGTGGTCGGATTTTATTGTCCCTTTTTGTGTTGCTAAAACATTATTAACATTTCCAGGTACGATTCCCAAGGAGATTGGCTATCTTGATAAATTTGAGGTGTTATACTTGCCTAACAATAGCTTAAGTGGATCTATTTCTTCCAAAATCTTCAACTTGTCATCACTCACTGATTTGGAGGTTGATCTGAATAGCCTCTCAGGCACAATTCCATCAAATACGGGATATAGCCTTCCTAGTCTGCAATATCTATACTTGAATGATAACAATTTTGTTGGAAATATTCCAAATAACATATTCAACTCTTCTAATCTTATTGAATTTCAATTGGATGACAATGCATTCAGTGGAACTCTACCCAATACTGCTTTTGGAGATTTAAGATTCCTTGAATCGCTATTCATATATGACAACAATTTGACAATTGAAGATTCTCATCAATTCTTTACTTCCTTGACAAATTGTAGATATTTGAAATATTTAGAGCTATCAGGGAATCATATATCTAATCTTCCTAAGTCAATTGGAAACATAACTTCGGAATTCTTCTCCGCAGAATCATGTGGAATTGATGGTAATATTCCCCAAGAAGTTGGAAACATGAGCAACTTGCTAACTTTTTCTCTTTTTAGGAATAATATAACTGGACCAATACCTGGTACATTCAAAAAGTTGCAAAAACTTCAGTTTTTGAGTCTTAGCAACAATGGACTACAAGGATCATTTATTGAGGAGATTTGTGAAATGAAGAGTTTGGGTGAGTTGTATCTAAAAAATAATAAGCTCTCTGGAGTTTTACCAACATGTTTGGGAAATATGATTTCTCTTATAAGGATAAATGTAGGATCTAACAGTTTCAACTCTAGAATACCTTTATCTCTTTGGAGTCTAAGAGATTTATTAGAGATAAATTTTTCTTCAAATTCTTTAATTGGTAATCTTCCACCTGAGATTGGGAATTTGAGAGCAATTATACGATTAGACCTATCAAGAAATCAGATTTCAAGCAACATTCCAACAACCATTAATTCCTTACTAACATTGCAGAGTCTCTCCTTAGCAGATAATAAACTGAATGGATCAATTCCCAAATCACTTGGTCAAATGGTAAGCTTGATCTCTTTGGACTTGTCCCAAAATATGTTAACTGGTGTTATTCCAAAATCCTTAGAATCCCTTTTGTATCTTCAAAACATCAACTTCTCATATAATAGATTACAAGGAGAGACTCCTGATGGTGGACATTTCAAAAATTTCACAGCTCAATCATTTATGCATAATGATGCACTTTGCGGTGATCCTCGCCTCTTGGTACCTCTATGTGGTAAGCAAGTTAAGAAATGGTCAATGGAAAAAAAGCTTATATTGAAATGCATACTTCCCATAGTTGTGTCAGCCATTTTGGTTGTTGCTTGCATCATAGTTTTAAAACATAATAAAAGGAGAAAGAATGAAAATACTCTTGAAAAGGGTTTGTCAACTTTGGGAGCTCCAAGAAGAATATCATATTATGAACTTGTGCAAGCAACAAATGGATTCAGTGAGAGTAATTTCCTTGGAAGGGGGGGATTTGGCTCTGTTTATCAGGGGAAGCTTCTTGATGGTGAGATGATTGCAGTTAAAGTAATTGATTTGCAATCAGAGGCAAAATCAAAGAGCTTTGATGCAGAATGCAATGCGATGAGAAATCTACGACATCGAAATCTGGTAAAGATTATCAGTAGTTGCTCAAATCTTGATTTCAAATCATTGGTGATGGAGTTCATGTCAAATGGAAGTGTAGACAAATGGTTATATTTAAATAACTATTGTCTAACTTTCTTGCAAAGGTTAAATATAATGATAGATGTTGCATCTGCATTGGGATATCTCCATCATGGTTCTTCAATACCAGTGGTTCATTGTGATCTAAAGCCTTCCAATGTCTTGTTGGATGAAAATATGGTTGCACATGTTAGTGATTTTGGTATTGCCAAGCTCATGGATGAAGGACAATCTCAAACTCATACACAAACTTTGGCTACTATTGGATATCTTGCACCAGAATATGGATCTAAAGGAATTGTTTCTGTCAAAGGAGACGTGTACAGCTATGGGATTATGCTAATGGAAATCTTCACAAGAAAAAAGCCAACAGATGATATGTTTGTTGTAGAACTAAGCTTGAAGACATGGATCAGTGGATCATTGCCTAATTCAATCATGGAGGTCATGGATTCAAATTTAGTCCAAATAACTGGGGACCAAATTGATGATATATTGACTCACATGTCATATATTTTTAGTTTAGCACTGAATTGTTGTGAAGATTCACCTGAAGCAAGAATCAATATGGCAGATGTTATTGCGACGCTAATCAAAATCAAGACTTTGGTTGTTGGTGCAAACACACTCTAG 2457 0.3451 MSNTVESYLSHYIIIPKKGKRWSDFIVPFCVAKTLLTFPGTIPKEIGYLDKFEVLYLPNNSLSGSISSKIFNLSSLTDLEVDLNSLSGTIPSNTGYSLPSLQYLYLNDNNFVGNIPNNIFNSSNLIEFQLDDNAFSGTLPNTAFGDLRFLESLFIYDNNLTIEDSHQFFTSLTNCRYLKYLELSGNHISNLPKSIGNITSEFFSAESCGIDGNIPQEVGNMSNLLTFSLFRNNITGPIPGTFKKLQKLQFLSLSNNGLQGSFIEEICEMKSLGELYLKNNKLSGVLPTCLGNMISLIRINVGSNSFNSRIPLSLWSLRDLLEINFSSNSLIGNLPPEIGNLRAIIRLDLSRNQISSNIPTTINSLLTLQSLSLADNKLNGSIPKSLGQMVSLISLDLSQNMLTGVIPKSLESLLYLQNINFSYNRLQGETPDGGHFKNFTAQSFMHNDALCGDPRLLVPLCGKQVKKWSMEKKLILKCILPIVVSAILVVACIIVLKHNKRRKNENTLEKGLSTLGAPRRISYYELVQATNGFSESNFLGRGGFGSVYQGKLLDGEMIAVKVIDLQSEAKSKSFDAECNAMRNLRHRNLVKIISSCSNLDFKSLVMEFMSNGSVDKWLYLNNYCLTFLQRLNIMIDVASALGYLHHGSSIPVVHCDLKPSNVLLDENMVAHVSDFGIAKLMDEGQSQTHTQTLATIGYLAPEYGSKGIVSVKGDVYSYGIMLMEIFTRKKPTDDMFVVELSLKTWISGSLPNSIMEVMDSNLVQITGDQIDDILTHMSYIFSLALNCCEDSPEARINMADVIATLIKIKTLVVGANTL* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1861 818 SUPERFAMILY L domain-like 207 454 - -
Mtr8g1861 818 Pfam Leucine rich repeat 346 402 IPR001611 GO:0005515
Mtr8g1861 818 Gene3D Phosphorylase Kinase; domain 1 516 608 - -
Mtr8g1861 818 Gene3D Ribonuclease Inhibitor 143 468 IPR032675 -
Mtr8g1861 818 SUPERFAMILY Protein kinase-like (PK-like) 513 805 IPR011009 -
Mtr8g1861 818 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 38 811 - -
Mtr8g1861 818 SUPERFAMILY L domain-like 39 260 - -
Mtr8g1861 818 Pfam Protein kinase domain 534 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1861 818 Gene3D Transferase(Phosphotransferase) domain 1 609 813 - -
Mtr8g1861 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 652 664 IPR008271 GO:0004672|GO:0006468
Mtr8g1861 818 Gene3D Ribonuclease Inhibitor 31 95 IPR032675 -
Mtr8g1861 818 Gene3D Ribonuclease Inhibitor 96 142 IPR032675 -
Mtr8g1861 818 ProSiteProfiles Leucine-rich repeat profile. 177 198 IPR001611 GO:0005515
Mtr8g1861 818 SMART serkin_6 533 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1861 818 ProSiteProfiles Protein kinase domain profile. 533 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1861 818 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 38 811 - -
Mtr8g1861 818 ProSitePatterns Protein kinases ATP-binding region signature. 539 561 IPR017441 GO:0005524
Mtr8g1861 818 SMART LRR_typ_2 341 365 IPR003591 -
Mtr8g1861 818 SMART LRR_typ_2 269 292 IPR003591 -
Mtr8g1861 818 SMART LRR_typ_2 98 122 IPR003591 -
Mtr8g1861 818 SMART LRR_typ_2 172 198 IPR003591 -
Mtr8g1861 818 SMART LRR_typ_2 389 412 IPR003591 -
Mtr8g1861 818 SMART LRR_typ_2 73 97 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1861 Mtr-Chr8 28242226 28245058 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1861 40 809 Receptor kinase-like Gene Family AT3G47570 38.404 1.87e-167 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr8g1861 Pkinase 4.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1861 - K13420 mtr:MTR_8g465340 1198.73