Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1850 ATGGAGAATAGTGAAGTAATGTCTTTTCATGTTCCACTTCTAGAAGGGGGTACGATTACCGAGGAGATTGGCTATCTTGATAAACTTGAGCTGCTATTATTGTCTAACAATAGCTTAAGTGGATCTATTCCTTCCAAAATCTTCAACTTGTCATCGCTCACTAATTTGGAGGTTGATCAGAATAGTCTCTCAGGCACAATTCCATCAAATACGGGATATAGCCTTCCTAGTCTGCAATATCTATTCTTGGATCATAACAATTTTGTTGGAAATATTCCAAATAACATATTCAACTCTTCTAAGTTAATTGATTTTCAATTGGATTCGAATGCATTCAGTGGAACTCTACCCAATACTGGTTTTAGAGATTTATGGTCCCTTGAAGTGTTTTTAATATATGACAACAAATTGACAATAGAAGATTCTCATCAATTCTTTACTTCCTTGACAAATTGTAGATATTTGAAATATCTTGACTTATCAGGGAATCATGTACTATCCAATATTCCAAAGTCAATTGGAAACATAACTTCAGAATACATCAGGGTAGAATCATGTGGAATTGGTGGTTATATTCCCCTAGAAGTTGGAAACATGAGTAACTTATTGCATTTTTCTCTTTCTAGGAATAATATAACTGGACCAATACCTGGTACATTCAAAGGGTTGCAGAAACTTCAGTATTTGGATCTTGGCAACAATGGACTACAAGGATCATTTATTGAAGAGTTTTGTGAAATGAAGAGTTTGGGTGAGTTGTATCTAAACAATAATAAGCTCTCGGGAGTTTTACCGACATGTTTGGGAAATATGAGTTCTATTATAAGGTTATACATTGGATCTAACAGTCTGAACTCTAAGATACCTTCCTCTCTTTGGAGTGTCATAGATATCTTAGAGCTAGATTTGTCCTCTAATGCCTTCATTGGTAATCTTCCGCCTGAGATTGGGAATTTGAGAGCAATTATAGCTTTAGATCTATCAGGAAATAATATTTCAAGAAACATTCCTTCAACCATTGGTTTATTGAAGACTTTAGAAACTCTCTCCTTAGCAAATAACAAACTGAATGAATCAATTCCATCATCACTTGGTGAAATGTTGAGCTTGACCTCCTTGGACTTGTCTCAGAATATGTTAACTGGTGTTATTCCAAAATCCTTAGAATCACTTTTGTATCTTCAAAACATCAACTTCTCATATAATAGATTACAAGGAGAGATTCCTGATGGTGGACATTTCAAAAACTTCACAGCTCAATCATTTATTCATAATGGTGCACTTTGCGGCAATCCTCTCCTCCAAGTACCTAAATGTCGTAAGCAAGTTAAGAAATGGTCAATGGAAAAAAAGCTTATATTGAAATGCATACTTCCCATAGTTGTGTCAGCCATTTTGGTTGTTGCTTGCATCATACTTTTAAAACATAATAAAAGGAGAAAGAATGAAAATACTCTTGAAAGGGGTTTGTCAACTCTAGGAGCTCCAAGAAGAATATCCTATTATGAACTTGTGCAAGCAACTAATGGATTCAATGAGAGTAATTTCCTTGGAAGTGGGGGATTTGGCTCTGTTTATCAGGGGAGGCTTCTTGATGGTGAGATGATTGCCGTTAAAGTAATTGATTTGCAATCAGAGGCAAAATCAAAGAGCTTTGATGCAGAATGCAATGCGATGAGAAATCTACGACATCGAAATTTGGTAAAGATTATCAGCAGTTGCTCAAATCTTGATTTCAAATCATTGGTGATGGAGTTCATGTCAAATGGAAGTGTATACAGTTGGTTATATTCAAATAACTATTGTCTAAGTTTCTTGCAAAGGTTAAATATAATGATAGACGTTGCATCTGCATTGGAATATCTTCATCATGGTTCTTCAATGCCTGTGGTTCATTGTGATCTAAAGCCTTCCAATGTCTTGTTGGATGAAAATATGGTTGCACATGTTAGTGATTTTGGTATTGCTAAGCTCATGGATGAAGGTCAATCTAAAACTCATACACAGACTTTAGCTACTGTTGGATACCTTGCACCAGAGTATGGATCTAAGGGAATTGTTTCTGTCAAAGGAGACGTGTACAGCTATGGGATTATGCTAATGGAAATCTTTACAAGAAGAAAGCCAACAGATGATATGTTTGTTGCAGAACTAAGCTTGAAGACATGGATCAGTGGATCATTGCCTAATTCAATTATGGAGCTCTTGGATTCAAATTTAGTCCAAATAACTGGGGACCAAATTGATGATATATCGACTCACATGTCATCTATTTTTAGTTTAGCCCTGAGTTGTTGTGAAGATTCACCTGAAGCAAGAATCAATATGGCAGATGTTATTGCGACGCTAATCAAAATCAAGACTTTGGTTGTTGGCGCAAACACAGTCTAG 2391 0.3576 MENSEVMSFHVPLLEGGTITEEIGYLDKLELLLLSNNSLSGSIPSKIFNLSSLTNLEVDQNSLSGTIPSNTGYSLPSLQYLFLDHNNFVGNIPNNIFNSSKLIDFQLDSNAFSGTLPNTGFRDLWSLEVFLIYDNKLTIEDSHQFFTSLTNCRYLKYLDLSGNHVLSNIPKSIGNITSEYIRVESCGIGGYIPLEVGNMSNLLHFSLSRNNITGPIPGTFKGLQKLQYLDLGNNGLQGSFIEEFCEMKSLGELYLNNNKLSGVLPTCLGNMSSIIRLYIGSNSLNSKIPSSLWSVIDILELDLSSNAFIGNLPPEIGNLRAIIALDLSGNNISRNIPSTIGLLKTLETLSLANNKLNESIPSSLGEMLSLTSLDLSQNMLTGVIPKSLESLLYLQNINFSYNRLQGEIPDGGHFKNFTAQSFIHNGALCGNPLLQVPKCRKQVKKWSMEKKLILKCILPIVVSAILVVACIILLKHNKRRKNENTLERGLSTLGAPRRISYYELVQATNGFNESNFLGSGGFGSVYQGRLLDGEMIAVKVIDLQSEAKSKSFDAECNAMRNLRHRNLVKIISSCSNLDFKSLVMEFMSNGSVYSWLYSNNYCLSFLQRLNIMIDVASALEYLHHGSSMPVVHCDLKPSNVLLDENMVAHVSDFGIAKLMDEGQSKTHTQTLATVGYLAPEYGSKGIVSVKGDVYSYGIMLMEIFTRRKPTDDMFVAELSLKTWISGSLPNSIMELLDSNLVQITGDQIDDISTHMSSIFSLALSCCEDSPEARINMADVIATLIKIKTLVVGANTV* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1850 796 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 16 789 - -
Mtr8g1850 796 Pfam Leucine Rich Repeat 369 391 IPR001611 GO:0005515
Mtr8g1850 796 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 16 789 - -
Mtr8g1850 796 SUPERFAMILY Protein kinase-like (PK-like) 491 783 IPR011009 -
Mtr8g1850 796 ProSiteProfiles Protein kinase domain profile. 511 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1850 796 Gene3D Ribonuclease Inhibitor 144 446 IPR032675 -
Mtr8g1850 796 SMART LRR_typ_2 75 99 IPR003591 -
Mtr8g1850 796 SMART LRR_typ_2 247 270 IPR003591 -
Mtr8g1850 796 SMART LRR_typ_2 223 246 IPR003591 -
Mtr8g1850 796 SMART LRR_typ_2 26 50 IPR003591 -
Mtr8g1850 796 SMART LRR_typ_2 367 390 IPR003591 -
Mtr8g1850 796 SMART LRR_typ_2 199 222 IPR003591 -
Mtr8g1850 796 SMART LRR_typ_2 319 343 IPR003591 -
Mtr8g1850 796 Pfam Leucine rich repeat 198 236 IPR001611 GO:0005515
Mtr8g1850 796 SMART serkin_6 511 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1850 796 SMART LRR_sd22_2 223 246 - -
Mtr8g1850 796 SMART LRR_sd22_2 343 362 - -
Mtr8g1850 796 SMART LRR_sd22_2 367 388 - -
Mtr8g1850 796 SMART LRR_sd22_2 247 273 - -
Mtr8g1850 796 SMART LRR_sd22_2 26 52 - -
Mtr8g1850 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Mtr8g1850 796 SUPERFAMILY L domain-like 17 238 - -
Mtr8g1850 796 Pfam Protein kinase domain 512 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1850 796 Gene3D Phosphorylase Kinase; domain 1 494 586 - -
Mtr8g1850 796 Gene3D Transferase(Phosphotransferase) domain 1 587 791 - -
Mtr8g1850 796 Gene3D Ribonuclease Inhibitor 13 143 IPR032675 -
Mtr8g1850 796 SUPERFAMILY L domain-like 180 434 - -
Mtr8g1850 796 ProSitePatterns Protein kinases ATP-binding region signature. 517 539 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1850 Mtr-Chr8 28005510 28041134 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1850 17 787 Receptor kinase-like Gene Family AT3G47570 37.282 2.71e-165 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr8g1850 Pkinase 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1850 - K13420 mtr:MTR_0070s0020 1169.07