Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1849 ATGGTTAATCTATCATCTCATCTCTTTCTTTTATCGCTTTCATTGCATTGTTGTTTTATTGCTTGCTTAGCTGCAAATACAAAAAACATCACAACTGATCAATCTGCTCTTCTAGCATTCAAATCCCTAATTACTTCAGACCCTTATGATGTGTTGGCTAATAATTGGTCAACCTCCTCTTCCGTATGCAATTGGATTGGTGTAACTTGTGATGAGCGGCACGGTAGAGTCCACAGTTTGATTCTCCGAAACATGAGTCTTAGAGGTACCGTTTCCCCAAATTTGGGGAATATGTCCTTCCTTGTTATACTTGACCTCAAAAACAATAGCTTCGGTGGTCAGTTTCCTAAAGAGTTATGTTCGTTGCGCCGATTAAAGGTTCTTCATATCAGCTACAACGAGTTTGAAGGGGGGATTCCTCCAGCATTGGGGAACTTATCACAACTTCAATATTTGTATCTCGGCACTAACAATTTTAATGGTTTTATTCCCCAATCTATGGGTAACCTTCATGGGTTGATAGAATTGGATACCATACGGAACAAGTTGTCTGGACCCATACCTCGAACAATTTCTAACATGTCTTCCATTGAAGTTCTCCATTTATCTTCTAACTACTTTTCAGGTACGATTCCCGAGGAGATTGGCTATCTTGATAAACTTGAGGTGCTATTATTGTCTAACAATAGCTTAAGTGGATCTATTCCTTCTAAAATCTTCAACTTGTCATCACTCACTGCTTTGGTGGTTGATCATAATAGCCTCTCAGGCACACTTCCATCAAATACGGGATATAGCCTTCCTAATCTGCAATATCTACACTTGTTTCAAAACAATTTTGTTGGAAATATTCCAAATAACATATTAAACTCTTCTAAGCTCCGTCAAATCGCATTGGAAACAAATGCATTCAGTGGAACTCTACCCAATACTACTTTTGGAGATTTAAGATTCCTTGAATTGTTTTTCACATATAACAATAAATTGACAATAGAAGATTCTCATCAATTCTTTACTTCCTTGACAAATTGTAGATATTTGAAATATCTTGACTTATCAGGTAATCATATATCCAATCTTCCTAAGTCAATTGGAAACATAACTTCAGAATACTTCAGGGCAAAATCATGTGGAATTGGTGGTTATATTCCCCTAGAAGTTGGAAACATGAGCACCTTGCTATCTTTTGATCTGTATGACAATAATATAAATGGACCAATACCTCGTTCAATCAAAGGGCTAGAGAAGCTTCAAGTATTGTCTCTTGCTTACAATGCACTCAAAGGATCATTCATTGATGAGCTCTGTCTAATTAAGAGTTTAGGTGAGTTGTATATAGAAAATAATAAGCTTTCTGGTGTTTTACCAACATGTTTGGGAAATATGACTTCTCTTAGAAAATTGAACGTAGGATCTAACAATTTGAACTCTAAGATACCTTCATCTCTTTGGGGTCTCACTGATATATTAATGTTAGATTTGTCCTCCAATGCTTTTATTGGTGATTTTCCACCCGATATTGGGAATTTGAGAGAACTTGTAATATTAGATCTATCAAGAAATCAAATTTCAAGCAACATTCCAACAACCATCAGTTCCTTACAAAATTTGCAGAATCTCTCCTTAGCTCATAATAAATTGAATGGGTCAATTCCCGCATCACTGAATGGAATGGTAAGCTTGATCTCTTTGGACTTGTCTCAAAATATGTTAACTGGTGTTATTCCAAAATCCTTAGAATCACTTTTGTACCTTCAAAACATCAACTTCTCATATAATAGATTACAAGGAGAGATTCCTAATGGTGGACATTTCAAAAATTTCACAGCTCAATCATTTATGCATAATGAAGCACTTTGCGGTGATCCTCGCCTTCAAGTACCTACATGTGGTAAGCAAGTTAAAAAATGGTCAATGGAAAAAAAGCTTATATTGGAATGCATACTTCCCTTAGTTGTGTCAGCCATTTTGGTTGTTGCGTGCATCATACTTTTAAAACATAATAAAAGGAGAAAGAATGAAAATAATGTTGAAAGGGGTTTGTCAACTTTGGGAGCTCCAAGAAGAATATCCTATTATGAACTTGTGCAAGCAACTAATGGATTCAATGAGCGTAATTTCCTTGGAAGTGGGGGATTTGGCTCTGTTTATCAGGGGAAGCTTCTTGATGGTGAGATGATTGCCGTTAAAGTAATTGATTTGCAATCAGAGGCAAAATCAAAGAGCTTTGATGCAGAATGCAATGCGATGAGAAATCTACGACATCGAAATCTGGTTAAGATTATCAGCAGTTGTTCAAATCTGGATTTCAAATCATTGGTGATGGAGTTCATGTCAAATGGAAGTGTAGACAAATGGTTATATTCAAATAACTATTGTCTAAATTTCTTGCAAAGGTTAAATATAATGATAGATGTTGCATCTGCATTGGAATATCTCCATCATGGTTCTTCAATGCCTGTGGTTCATTGTGATCTAAAGCCTTCCAATGTCTTGTTGGATGAAAATATGGTTGCACGTGTTAGTGATTTTGGTATTGCTAAGCTCATGGATGAAGGACAATCTAAAACTCATACACAAACTTTGGCTACTGTTGGATACCTCGCACCAGAGTATGGATCTAAAGGAATTGTTTCTGTCAAAGGAGATGTGTACAGCTATGGGATTATGCTAATGGAAATCTTCACAAGAAAAAAGCCAACAGATGATATGTTTGTTGCAGAACTAAACTTGAAGACATGGATCAATGGATCATTGCCTAATTCAATTATGGAGGTCTTGGATTCAAATTTAGTCCAACAAATTGGGGAACAAATTGATGACATATTGACTCACATATCATCTATTTTTGGTTTAGCCCTCAGTTGTTGTGAAGATTTACCTAAAGCAAGAATTAATATGGCAGATGTTATTAAGTCGCTAATCAAAATCAAGACTTTGGTTCTTAGAGCAAACAGGGTATAG 2964 0.36 MVNLSSHLFLLSLSLHCCFIACLAANTKNITTDQSALLAFKSLITSDPYDVLANNWSTSSSVCNWIGVTCDERHGRVHSLILRNMSLRGTVSPNLGNMSFLVILDLKNNSFGGQFPKELCSLRRLKVLHISYNEFEGGIPPALGNLSQLQYLYLGTNNFNGFIPQSMGNLHGLIELDTIRNKLSGPIPRTISNMSSIEVLHLSSNYFSGTIPEEIGYLDKLEVLLLSNNSLSGSIPSKIFNLSSLTALVVDHNSLSGTLPSNTGYSLPNLQYLHLFQNNFVGNIPNNILNSSKLRQIALETNAFSGTLPNTTFGDLRFLELFFTYNNKLTIEDSHQFFTSLTNCRYLKYLDLSGNHISNLPKSIGNITSEYFRAKSCGIGGYIPLEVGNMSTLLSFDLYDNNINGPIPRSIKGLEKLQVLSLAYNALKGSFIDELCLIKSLGELYIENNKLSGVLPTCLGNMTSLRKLNVGSNNLNSKIPSSLWGLTDILMLDLSSNAFIGDFPPDIGNLRELVILDLSRNQISSNIPTTISSLQNLQNLSLAHNKLNGSIPASLNGMVSLISLDLSQNMLTGVIPKSLESLLYLQNINFSYNRLQGEIPNGGHFKNFTAQSFMHNEALCGDPRLQVPTCGKQVKKWSMEKKLILECILPLVVSAILVVACIILLKHNKRRKNENNVERGLSTLGAPRRISYYELVQATNGFNERNFLGSGGFGSVYQGKLLDGEMIAVKVIDLQSEAKSKSFDAECNAMRNLRHRNLVKIISSCSNLDFKSLVMEFMSNGSVDKWLYSNNYCLNFLQRLNIMIDVASALEYLHHGSSMPVVHCDLKPSNVLLDENMVARVSDFGIAKLMDEGQSKTHTQTLATVGYLAPEYGSKGIVSVKGDVYSYGIMLMEIFTRKKPTDDMFVAELNLKTWINGSLPNSIMEVLDSNLVQQIGEQIDDILTHISSIFGLALSCCEDLPKARINMADVIKSLIKIKTLVLRANRV* 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1849 987 ProSitePatterns Protein kinases ATP-binding region signature. 708 730 IPR017441 GO:0005524
Mtr8g1849 987 SMART LRR_sd22_2 341 369 - -
Mtr8g1849 987 SMART LRR_sd22_2 146 172 - -
Mtr8g1849 987 SMART LRR_sd22_2 534 557 - -
Mtr8g1849 987 SMART LRR_sd22_2 510 529 - -
Mtr8g1849 987 SMART LRR_sd22_2 218 244 - -
Mtr8g1849 987 SMART LRR_sd22_2 558 579 - -
Mtr8g1849 987 SMART LRR_sd22_2 390 416 - -
Mtr8g1849 987 ProSitePatterns Serine/Threonine protein kinases active-site signature. 821 833 IPR008271 GO:0004672|GO:0006468
Mtr8g1849 987 SUPERFAMILY L domain-like 376 623 - -
Mtr8g1849 987 Gene3D Ribonuclease Inhibitor 332 638 IPR032675 -
Mtr8g1849 987 Gene3D Ribonuclease Inhibitor 185 264 IPR032675 -
Mtr8g1849 987 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Mtr8g1849 987 SUPERFAMILY Protein kinase-like (PK-like) 681 975 IPR011009 -
Mtr8g1849 987 SUPERFAMILY L domain-like 44 368 - -
Mtr8g1849 987 ProSiteProfiles Protein kinase domain profile. 702 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1849 987 Gene3D Phosphorylase Kinase; domain 1 685 777 - -
Mtr8g1849 987 Gene3D Transferase(Phosphotransferase) domain 1 778 984 - -
Mtr8g1849 987 ProSiteProfiles Leucine-rich repeat profile. 346 367 IPR001611 GO:0005515
Mtr8g1849 987 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 176 982 - -
Mtr8g1849 987 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 8 148 - -
Mtr8g1849 987 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 133 209 - -
Mtr8g1849 987 SMART serkin_6 702 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1849 987 Pfam Leucine rich repeat 440 498 IPR001611 GO:0005515
Mtr8g1849 987 SMART LRR_typ_2 146 170 IPR003591 -
Mtr8g1849 987 SMART LRR_typ_2 438 461 IPR003591 -
Mtr8g1849 987 SMART LRR_typ_2 267 291 IPR003591 -
Mtr8g1849 987 SMART LRR_typ_2 534 557 IPR003591 -
Mtr8g1849 987 SMART LRR_typ_2 510 533 IPR003591 -
Mtr8g1849 987 SMART LRR_typ_2 558 581 IPR003591 -
Mtr8g1849 987 SMART LRR_typ_2 341 367 IPR003591 -
Mtr8g1849 987 SMART LRR_typ_2 218 242 IPR003591 -
Mtr8g1849 987 SMART LRR_typ_2 462 486 IPR003591 -
Mtr8g1849 987 Gene3D Ribonuclease Inhibitor 31 184 IPR032675 -
Mtr8g1849 987 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 176 982 - -
Mtr8g1849 987 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 133 209 - -
Mtr8g1849 987 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 8 148 - -
Mtr8g1849 987 Gene3D Ribonuclease Inhibitor 265 315 IPR032675 -
Mtr8g1849 987 Pfam Leucine Rich Repeat 560 582 IPR001611 GO:0005515
Mtr8g1849 987 Pfam Leucine Rich Repeat 124 146 IPR001611 GO:0005515
Mtr8g1849 987 Pfam Protein kinase domain 703 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1849 Mtr-Chr8 27955272 27997834 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1849 32 987 Receptor kinase-like Gene Family AT3G47570 38.306 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr8g1849 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1849 - K13420 mtr:MTR_8g469650 1261.13