Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1847 ATGTTGGCTTTGTTGATATTCTATGGATGTGAAATTCCAAAAGGGATATTGGGTGATCTTACACAGCTAATATCATTGTCCCTTATGGATAACCAGCTTTCAGGTGAAATTCCAAAAGGGATATTGGGTCATCTTACACAGCTTAAAACATTGTACCTTGGTGGTAACCAGCTTTCAGGTACGATTCCCAAGGAGATTGGTTATCTTGATAAACTTGAGGTGCTATCATTGTCTAACAATAGCTTAAGTGGATCTATTCCTTCCAAAATCTTCAACTTGTCATCACTCACATATTTGGAGGTTGATCGTAATAGCCTCTCAAGCACAATTCCATCAAATACGGGATATAGCCTTCCTAACCTGCAATATCTACACTTGTATCAAAACAATTTTGTTGGAAATATTCCAAATAATATATTCAACTCTTCAAAGCTCCGTCAAATCGCATTGGACAAAAATGCATTCAGTGGACTTGTTCCCAATGTTATTGGAAACTTAAGGTCCCTTGAATCGCTATTCATATATGACAACAATTTGACAATAGAAGATTCTCATCAATTCTTTACTTCCTTGACAAATTGTAGATATTTGAAATATTTAGAGCTATCAAGGAATCATCATATATCCAATCTTCCTAAGTCAATTGGAAACCTAACTTCAGAATACTTTACGGCAGAATCATGTGGAATTGATGGTAATATTCCCCAAGAAGTTGGAAACATGAGCAACTTGCTAACTTTGGATCTGTCTGACAATAATATAAATGGACCAATACCTGGTACATTCAAAGGGTTGCAGAAACTTCAGCATTTGAGTCTTAGCAACAATGGATTACAAGGACCATTTATTGAAGAGCTTTGTGAAATGAAGAGTTTGGGTGAGTTGTATCTTGAAAATAATAAGCTTTCTGGAGTTTTACCAACATGTTTAGGAAATATGATTTCTCTTATAAGGATAAATGTAGGATCTAACAGTTTAAACTCTAGAATACCTTTATCTCTTTGGAGTCTTAGAGATATATTAGAGATAAATTTTTCTTCAAATTCTTTAATTGGTAATCTTCCACCTGAGATTGGGAATTTGAGAGCAATTATACTATTAGACCTATCAAGAAATCAGATTTCAAGCAACATTCCAACAACCATCAGTTCCTTACAAACATTGCAGAATCTCTCCTTAGCAGATAATAAACTGAATGGATCAATTCCCAAATCACTTGGTGAAATGGTAAGTTTAATCTCTTTGGACTTGTCCCAAAATATGTTAACCGGTGTTATTCCAAAATCCTTAGAATCACTTTTGTATCTTCAAAACATCAACTTCTCATATAATAGATTACAAGGAGAGATTCCCGATGGTGGACATTTCAAAAACTTCACAGCTCAATCATTTATGCATAATGAAGCACTTTGCGGCGATCCTCGCCTCCAAGTACCTACATGTGCTAAGCATGTTAAGAAATGGAGAAAGAATGAAAATACTCTTGAAAGGGGTTTGTCAATTTTGGGAGCTCCAAGGAGAATATCCTATTATGAACTTGTGCAAGCAACTAATGGATTCAATGAGAGTAATTTCCTTGGAAGGGGGGGATTTGGCTCTGTTTATCAGGGGAAGCTTCTTGATGGTGAGATGATTGCCGTTAAAGTAATTGATTTGCAATCAGAGGCAAAATCAAAGAGCTTTGATGCAGAATGCAATGCGATGAGAAATCTACGACATCGGAATCTGGTAAAGATTATCAGCAGTTGCTCAAATCTTGATTTCAAATCATTGGTGATGGAGTTCATGTCAAATGGAAGTGTTGATAAATGGTTATATTCAAATAACTATTGTCTAAGTTTCTTGCAAAGGTTAAATATAATGATAGATGTTGCATCTGCATTGGAATATCTCCATCATGGTTCCTCAATACCAGTGGTTCATTGTGATCTAAAGCCTTCCAATGTCTTGTTGGATGAAAATATGGTTGCACATGTTAGTGATTTTGGTATTGCAAAGCTGATGGATGAAGGACAATCTAAAACTCATACACAAACTTTGGCTACTGTTGGATACCTCGCACCAGAGTATGGTTCTAGAGGAATTGTTTCTGTGAAAGGAGACGTGTTCAGCTATGGGATTATGCTAATGGAAATCTTCACAAGAAGAAAGCCAACAGATGATATGTTTGTTGCAGAACTAAGCTTGAAGACATGGATCAGTCGATCATTGCCTAATTCCATTATGGAGGTCATGGATTCAAATTTAGTCCAAATAACTGGGGACCAAATTGATAATATATTGACTCACATGTCATCTATTTTTAGTTTAGCTCTAAGTTGTTGTGAGGATTCACCTGAAGCAAGAATCAATATGGCAGATGTTATTGCGACGCTAATCAAAATCAACACTTTGGTTGTTCGCGCAAACACAGTCTAG 2418 0.3598 MLALLIFYGCEIPKGILGDLTQLISLSLMDNQLSGEIPKGILGHLTQLKTLYLGGNQLSGTIPKEIGYLDKLEVLSLSNNSLSGSIPSKIFNLSSLTYLEVDRNSLSSTIPSNTGYSLPNLQYLHLYQNNFVGNIPNNIFNSSKLRQIALDKNAFSGLVPNVIGNLRSLESLFIYDNNLTIEDSHQFFTSLTNCRYLKYLELSRNHHISNLPKSIGNLTSEYFTAESCGIDGNIPQEVGNMSNLLTLDLSDNNINGPIPGTFKGLQKLQHLSLSNNGLQGPFIEELCEMKSLGELYLENNKLSGVLPTCLGNMISLIRINVGSNSLNSRIPLSLWSLRDILEINFSSNSLIGNLPPEIGNLRAIILLDLSRNQISSNIPTTISSLQTLQNLSLADNKLNGSIPKSLGEMVSLISLDLSQNMLTGVIPKSLESLLYLQNINFSYNRLQGEIPDGGHFKNFTAQSFMHNEALCGDPRLQVPTCAKHVKKWRKNENTLERGLSILGAPRRISYYELVQATNGFNESNFLGRGGFGSVYQGKLLDGEMIAVKVIDLQSEAKSKSFDAECNAMRNLRHRNLVKIISSCSNLDFKSLVMEFMSNGSVDKWLYSNNYCLSFLQRLNIMIDVASALEYLHHGSSIPVVHCDLKPSNVLLDENMVAHVSDFGIAKLMDEGQSKTHTQTLATVGYLAPEYGSRGIVSVKGDVFSYGIMLMEIFTRRKPTDDMFVAELSLKTWISRSLPNSIMEVMDSNLVQITGDQIDNILTHMSSIFSLALSCCEDSPEARINMADVIATLIKINTLVVRANTV* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1847 805 SUPERFAMILY L domain-like 12 132 - -
Mtr8g1847 805 Pfam Protein kinase domain 521 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1847 805 Gene3D Ribonuclease Inhibitor 2 185 IPR032675 -
Mtr8g1847 805 Gene3D Ribonuclease Inhibitor 186 489 IPR032675 -
Mtr8g1847 805 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 14 493 - -
Mtr8g1847 805 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 502 800 - -
Mtr8g1847 805 Pfam Leucine Rich Repeat 411 433 IPR001611 GO:0005515
Mtr8g1847 805 SMART serkin_6 520 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1847 805 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 502 800 - -
Mtr8g1847 805 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 14 493 - -
Mtr8g1847 805 SUPERFAMILY Protein kinase-like (PK-like) 500 793 IPR011009 -
Mtr8g1847 805 Gene3D Transferase(Phosphotransferase) domain 1 596 802 - -
Mtr8g1847 805 SUPERFAMILY RNI-like 104 452 - -
Mtr8g1847 805 ProSitePatterns Protein kinases ATP-binding region signature. 526 548 IPR017441 GO:0005524
Mtr8g1847 805 Gene3D Phosphorylase Kinase; domain 1 503 595 - -
Mtr8g1847 805 ProSiteProfiles Protein kinase domain profile. 520 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1847 805 Pfam Leucine rich repeat 71 131 IPR001611 GO:0005515
Mtr8g1847 805 Pfam Leucine rich repeat 240 278 IPR001611 GO:0005515
Mtr8g1847 805 SMART LRR_sd22_2 409 430 - -
Mtr8g1847 805 SMART LRR_sd22_2 265 288 - -
Mtr8g1847 805 SMART LRR_sd22_2 69 95 - -
Mtr8g1847 805 SMART LRR_sd22_2 166 186 - -
Mtr8g1847 805 SMART LRR_sd22_2 385 406 - -
Mtr8g1847 805 SMART LRR_sd22_2 45 60 - -
Mtr8g1847 805 SMART LRR_typ_2 289 312 IPR003591 -
Mtr8g1847 805 SMART LRR_typ_2 409 432 IPR003591 -
Mtr8g1847 805 SMART LRR_typ_2 20 44 IPR003591 -
Mtr8g1847 805 SMART LRR_typ_2 45 69 IPR003591 -
Mtr8g1847 805 SMART LRR_typ_2 241 264 IPR003591 -
Mtr8g1847 805 SMART LRR_typ_2 118 142 IPR003591 -
Mtr8g1847 805 SMART LRR_typ_2 361 385 IPR003591 -
Mtr8g1847 805 SMART LRR_typ_2 166 189 IPR003591 -
Mtr8g1847 805 SMART LRR_typ_2 93 117 IPR003591 -
Mtr8g1847 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1847 Mtr-Chr8 27906958 27940425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1847 17 803 Receptor kinase-like Gene Family AT3G47570 37.133 6.11e-172 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr8g1847 Pkinase 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1847 - K13420 mtr:MTR_8g465340 1133.24