Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1845 ATGGTGAATCTATTATCTTGTCTCTTACTTGTTTTGTTATCATTGCACTATTTTGTGGCTTGCTTAGCTGCGAATACGAAAAACATCACAACGGATCAATCTGCTCTTCTAGCATTCAAATCTTTAATTACTTCAGACCCCTATGATATGTTGGCTAATAATTGGTCAACATCCTCTTCTGTATGTAGTTGGGTTGGTGTAACTTGTGATGAGCGACACGGAAGAGTCCATAGTTTAATTCTCCAAAACATGAGTCTTAGAGGTATTGTTTCCCCAAACTTGGGGAATATGTCCTTCCTAGTTATACTTGACCTCAAAAACAATAGCTTCAGTGGTCAGTTTCCTAAAGAGTTATGCCGGTTGCACAAATTAAGGGTTCTTCATATCAGCTATAACAAGTTTGAAGGGGGGATTCCTGCAGCGTTGGGGGACTTATCACAACTTCAATATTTGTATCTTGGTGCTAACAATTTTAGTGGTTTTGTACCCCAATCTATTGGTAAACTTCGTCAGTTGAAAGAATTGGATACTATTCAAAACAGATTGTCTGGACCCATACCTCAATCAATTTCAAATTTGTCCTCACTTGAACGTATCGGTTTATCTTTCAACTACTTTTCAGATGTTGCATCTGCATTGGAATATCTTCATCATGGTTCTTCAATACCTGTGGTTCATTGCGATCTAAAGCCTTCGAATGTCTTGTTGGATGAAAATATGGTTGCACATGTTAGCGATTTTGGTATTGCCAAGCTCCTGGATGAAGGACAATCTCAAACTCATACACAAACTTTGGCTACTATTGGATATCTTGCACCAGAGTATGGATCTAAAGGAATTGTTTCGGTCAAAGGAGATGTGTACAGCTATGGGATTATGCTAATGGAAATTTTCACAAGAAGAAAGCCAACAGATGATATGTTTGTTGCAGAACTAAGCTTGAAGACATGGATCATTGGATCATTGCCTAATTCAATTATGGAGGTCCTGGATTCAAATTTAGTCCAACTAACTGGGGACACAATTGATGATATATTGACTCACATGTCATCTATTTTTAGTTTAGCATTGAATTGTTGTGAAGAATCACCTGATGCAAGAATCAATATGGCAGATGTTATTGTGTCGCTAATGAAAATAAAGGCTTTGGTTCTTGGCGCAAACAGGGTCTAG 1173 0.3785 MVNLLSCLLLVLLSLHYFVACLAANTKNITTDQSALLAFKSLITSDPYDMLANNWSTSSSVCSWVGVTCDERHGRVHSLILQNMSLRGIVSPNLGNMSFLVILDLKNNSFSGQFPKELCRLHKLRVLHISYNKFEGGIPAALGDLSQLQYLYLGANNFSGFVPQSIGKLRQLKELDTIQNRLSGPIPQSISNLSSLERIGLSFNYFSDVASALEYLHHGSSIPVVHCDLKPSNVLLDENMVAHVSDFGIAKLLDEGQSQTHTQTLATIGYLAPEYGSKGIVSVKGDVYSYGIMLMEIFTRRKPTDDMFVAELSLKTWIIGSLPNSIMEVLDSNLVQLTGDTIDDILTHMSSIFSLALNCCEESPDARINMADVIVSLMKIKALVLGANRV* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1845 390 ProSiteProfiles Protein kinase domain profile. 88 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1845 390 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 7 147 - -
Mtr8g1845 390 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 126 207 - -
Mtr8g1845 390 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 206 383 - -
Mtr8g1845 390 Gene3D Transferase(Phosphotransferase) domain 1 189 385 - -
Mtr8g1845 390 SMART serkin_6 121 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1845 390 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Mtr8g1845 390 Gene3D Ribonuclease Inhibitor 29 188 IPR032675 -
Mtr8g1845 390 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 7 147 - -
Mtr8g1845 390 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 206 383 - -
Mtr8g1845 390 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 126 207 - -
Mtr8g1845 390 SUPERFAMILY L domain-like 31 233 - -
Mtr8g1845 390 SUPERFAMILY Protein kinase-like (PK-like) 203 377 IPR011009 -
Mtr8g1845 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Mtr8g1845 390 Pfam Protein kinase domain 204 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1845 390 Pfam Leucine Rich Repeat 123 143 IPR001611 GO:0005515
Mtr8g1845 390 Pfam Leucine rich repeat 146 205 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1845 Mtr-Chr8 27897062 27900893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1845 193 390 Receptor kinase-like Gene Family AT3G47570 39.216 7.09e-44 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr8g1845 Pkinase 6.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1845 - K13420 mtr:MTR_8g470380 399.823