Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1841 ATGACTAACTTGCAATATCTACACTTGGATCATAACAATTTTGTTGGAAATATTCCAAGTAGTATATTCAACTCTTCTAATCTTATTCAATTTCAATTGAGTGTCAATGCATTCAGTGGAACTCTACCCAATATTGATTTTGGAGATTTAGTATTGCTTGAATTGTTTCACATATATAACAACAATTTGACAATCGAAGATTCTCATCAATTCTTTACTTCCTTGACAAATTGTAGGCATTTGAAATATCTAGACTTATCAGGGAATCATGTACTACCCAATCTTCCTAAGTCAATTGGAAACATAACTTCAGAATTCTTCCGGGCACAGTCATGTGGAATTGAGGGTAATATTCCCGTAGAAGTTGGAAACATGAGCAACTTGCTATTACTTTCTCTATATGACAATAATATAAATGAACCAATACCTCATTCACTCAAAGGGCTAGAGAAGCTTCAAGTATTGTCTCTTGCTTACAATGCACTCAAAGGATCATTCATTGATGAGCTCTGTCTAATTAAGAGTTTAGGTGAGTTGTATCTAGAAAATAATAAGCTTTCTGGTGTTTTACCAACATGTTCGGGAAATATGACTTCTCTTAGAAAATTGAACGTAGGATCTAACAATTTGAACTCTAAGATACCTACATCTCTTTGGGGTCTCACTGATATATTAATGTTAGATTTGTCCTCCAATGCTTTTATTGGTGATTTTCCACCCGATATTGGGAATTTGAGAGAACTTGTAATATTAGATCTATCAAGAAATCAAATTTCAAGCAACATTCCTACAACCATCAGTTCCTTACAAAATTTGCAGAATCTCTCCTTAGCTCATAACAAATTGAATGGGTCAATTCCCACATCACTTGGTGAAATGGTAAGCTTGATCTCCTTGGACTTGTCCCAAAATATGCTAGCTGGTGTTATTCCAAAGTCATTAGAATCACTTTTGTACCTTCAGAACATCAACTTCTCATATAATAGATTACAAGGAGAGATTCCTGATGGTGGACCTTTCAAGAACTGCACAACTCAATCTTTTATGCATAATGGACCACTTTGTGGAAATATTCGCCTCCAAGTACCACCTTGTGCAACAAATGGATTCAATGAGAGAAAATTACTTGGAAGGGGGAGCTTTGGCTCTGTGTATCAAGGGGAGCTTCCTGATGGTGAGATTATTGCAGTCAAAGTATTTGATTTACAATCAGAGGCAAAATCAAAGAGCTTTGATGCAGAATGCAATGCAATGAGAAATCTACGGCATCGAAATCTGGTAAAGATTATCAGTAGTTGCTCAAATCTTGATTTCAAATCATTGGTGATGGAGTTCATGTCAAATGGAAGTGTAGACAGTTGGTTATATTCAAATAACTATTGTCTAAGTTTCTTGCAAAGGTTAAATATAATGATAGATGTTGCATCTGCATTGAAATATCTTCATCATGGTTCTTCAATGCCTGTGGTTCACTGTGATCTAAAGCCCTCCAATGTCATGTTGGATGAAAATATGGTTGCCCGTGTTAGTGATTTTGGTATTGCTAAGCTCATGGATGAAGGTCAATCTAAAACTCATACACAGACTTTAGCTACTATTGGATACCTTGCACCAAAGTGTGGAACTAAGGGGATTGTTTCTGTGAAAGGAGATATTTACAGCTATGGGATTATGCTAATGGAAATCTTCACAAGAAGAAAGCCAACAGATGATATATTTGTTGCAGAACTAAGTTTGAAGACATGGATCAGTGAATCATTGCCAAATTCAATTATGGAGGTCTTGGATTCAAATTTAGTCCAACAAATTGGGGAACAAATTGATGACATATTGATTTACATGTCATCTATTTTTGGTTTAGCCCTGAATTGTTGCGAAGATTCACCTGAAGCAAGAATTAATATTGCAGATGTTATTGCGTCGTTAATCAAAATCAAGACTTTGATTCTTAGCGCAAGCAGGGTCTAG 1968 0.3562 MTNLQYLHLDHNNFVGNIPSSIFNSSNLIQFQLSVNAFSGTLPNIDFGDLVLLELFHIYNNNLTIEDSHQFFTSLTNCRHLKYLDLSGNHVLPNLPKSIGNITSEFFRAQSCGIEGNIPVEVGNMSNLLLLSLYDNNINEPIPHSLKGLEKLQVLSLAYNALKGSFIDELCLIKSLGELYLENNKLSGVLPTCSGNMTSLRKLNVGSNNLNSKIPTSLWGLTDILMLDLSSNAFIGDFPPDIGNLRELVILDLSRNQISSNIPTTISSLQNLQNLSLAHNKLNGSIPTSLGEMVSLISLDLSQNMLAGVIPKSLESLLYLQNINFSYNRLQGEIPDGGPFKNCTTQSFMHNGPLCGNIRLQVPPCATNGFNERKLLGRGSFGSVYQGELPDGEIIAVKVFDLQSEAKSKSFDAECNAMRNLRHRNLVKIISSCSNLDFKSLVMEFMSNGSVDSWLYSNNYCLSFLQRLNIMIDVASALKYLHHGSSMPVVHCDLKPSNVMLDENMVARVSDFGIAKLMDEGQSKTHTQTLATIGYLAPKCGTKGIVSVKGDIYSYGIMLMEIFTRRKPTDDIFVAELSLKTWISESLPNSIMEVLDSNLVQQIGEQIDDILIYMSSIFGLALNCCEDSPEARINIADVIASLIKIKTLILSASRV* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1841 655 ProSitePatterns Protein kinases ATP-binding region signature. 376 398 IPR017441 GO:0005524
Mtr8g1841 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Mtr8g1841 655 Pfam Protein kinase domain 371 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1841 655 PANTHER RECEPTOR-LIKE PROTEIN 55 366 648 - -
Mtr8g1841 655 PANTHER RECEPTOR-LIKE PROTEIN 55 10 366 - -
Mtr8g1841 655 Gene3D Ribonuclease Inhibitor 1 362 IPR032675 -
Mtr8g1841 655 Gene3D Transferase(Phosphotransferase) domain 1 446 651 - -
Mtr8g1841 655 Gene3D Phosphorylase Kinase; domain 1 363 445 - -
Mtr8g1841 655 SUPERFAMILY L domain-like 110 356 - -
Mtr8g1841 655 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 366 648 - -
Mtr8g1841 655 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 10 366 - -
Mtr8g1841 655 SUPERFAMILY Protein kinase-like (PK-like) 353 642 IPR011009 -
Mtr8g1841 655 SUPERFAMILY L domain-like 1 164 - -
Mtr8g1841 655 ProSiteProfiles Protein kinase domain profile. 370 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1841 655 SMART LRR_typ_2 293 316 IPR003591 -
Mtr8g1841 655 SMART LRR_typ_2 173 196 IPR003591 -
Mtr8g1841 655 SMART LRR_typ_2 197 221 IPR003591 -
Mtr8g1841 655 SMART LRR_typ_2 1 25 IPR003591 -
Mtr8g1841 655 SMART LRR_typ_2 245 269 IPR003591 -
Mtr8g1841 655 Pfam Leucine rich repeat 246 306 IPR001611 GO:0005515
Mtr8g1841 655 Pfam Leucine rich repeat 175 233 IPR001611 GO:0005515
Mtr8g1841 655 SMART serkin_6 370 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1841 Mtr-Chr8 27754798 27757147 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1841 1 655 Receptor kinase-like Gene Family AT3G47570 32.026 1.78e-116 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr8g1841 Pkinase 1.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1841 - K13420 mtr:MTR_8g468620 954.896