Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1837 ATGGTGAATCTATTATCTTGTATCTTACTTTTTTTGCTATCATTGCATTGTTTTGTGGCTTGCTTAGCTGTGAATACAAAAAACATCACAACAGATCAATATGCTCTTCTAGCATTCAAATCCCTCATTACTTCAGACCCTTATGATATCTTGTCTAAGAATTGGTCAACCTCCTCTTCTGTATGCAATTGGGTTGGTGTAACTTGTGATGAGCGACACGGAAGAGTCCGTAGTTTGATTCTCCGAAACATGAGTCTTAAAGGTACCGTTTCTCCAAACTTGGGGAATCTGTCCTTTCTTGTTATACTTGACCTAAAAAATAATAGCTTCGGTGGTCAGTTTCTTACAGAGGTATGTCGGTTGCGCCGATTAAAGGTTCTTCATATCAGCTATAACAAGTTTGAAGGGGGGATTCCTGCAGCGTTGGAGGACTTATCACAACTTCAATATTTGTATCTTGCTGCTAACAATTTTAGTGGTTCTGTCCCCCAATCTATTGGTAAACTTCGTCAGTTGAAAGTATTGGATACTTTTCAGAACAGATTGTCTGGACCCATACCTCAATCAATTTCAAATTTGTCCTCACTTGAATATATCGATTTATCATCCAACTACTTTTCAGGTACGATTCCCGAGGAGATTGGCTATCTTGATAAACTTGAGCTGCTAGTTTTGGGAGACAATAGGTTAAGTGGATCTATTCCTTCCAAAATCTTCAACTTGTCATCACTCACTGCTTTGGTGGTTGAAAATAATAGCCTCTCAGGCACAATTCCATCAAATACGGGATATAGCCTTCCTAGTCTGCAATATCTATTCTTGAATGATAACAATTTTGTTGGAAATATTCTAAATAACATATTCAACTCTTCTAAGCTTATTGTATTTCAATTGCATTCGAATGTATTCAGTGGAACTCTACCCAATACTGCTTTTGAAGATTTAGGATTGCTTGAATCGATTCGCATATCTAACAACAATTTGACAATAGAAGATTCTCATCAATTCTTTACTTCCTTGACAAATTGTAGATATTTGAAATATTTAGAGCTATCAGGGAATCATATATCCAATCTTCCTAAGTCAATTGGAAACCTAACTTCAGAATTCTTCAGGGCAGAATCATGTGGAATTGGTGGTTATATTCCCCTAGAAGTTGGAAACATGAGCAACTTGCTATCTTTTGATCTGTATTACAATAATATAAATGGACCAATACCTGGTACATTCAAAGGGTTGCAGAAATTTCAGTATTTGGATCTTAGCAGCAATGGACTACAAGGATCATTTATTGAAGAGTTTTGTGAAATGAAGAGTTTGGGTGAGTTGTATCTAGACAATAATAAGCTCTCTGGAGTTTTACCAACATGTTTGGGAAATATGACTTCTATTATAAGGATAAATGTAGGATCTAACAGTTTAAACTCTAGAATACCTTTATCTCTTTGGAGTCTTAGAGATATATTAGAGATAAATTTTTCTTCAAATTCTTTAATTGGTAATCTTCCACCTGAGATTGGGAATTTGAGAGCAATTATACTATTAGACCTATCAAGAAATCAGATTTCAAGCAACATTCCAACAATAATCAGTTCCTTACAAACATTGCAGAATCTCGTCTTAGCACAAAATAAACTGATTGGATCAATTCCCAAATCACTTGGTCAAATGGTAAGCTTGATCTCTTTGGACTTGTCCCAAAATATGTTAACTGGTGTTATTCCAAAATCCTTAGAATCACTTTTGTATCTTCAAAACATCAACTTCTCATATAATAGATTACAAGGAGAGATTCCTGATGGTGGACATTTCAAAAATTTCACAGCTCAATCATTTATGCATAATGATGCACTTTGCGGCGATCCTCGCCTCCTTGTACCTACATGTGGTAAGCAAGTTAAGAAATGGTCAATGGAAAAAAAACTTATATTGAAATGCATACTTTCCATAGTTGTGTCGGCCATTTTGGTTGTTGCGTGCATCATACTTTTAAAGCATAATAAAAGGAAAAAGAACGAAACTTCTCTTGAAAGGGGTTTGTCAACTTTGGGAACTCCAAGAAGAATATCCTATTATGAACTTTTGCAAGCAACTAATGGATTCAATGAGAGTAATTTCCTTGGAAGGGGGGGATTTGGCTCTGTTTATCAGGGGAAGCTTCTTGATGGTGAGATGATTGCCGTTAAAGTAATTGATTTGCAATCAGAGGCAAAATCAAAGAGCTTTGATGCAGAATGCAATGCAATGAGAAATCTACGACATCGAAATCTGGTAAAGATTATCAGCAGTTGCTCAAATCTTGATTTCAAATCATTGGTAATGGAATTCATGTCAAATGGAAGTGTAGACAAATGGTTATATTCAAATAACTATTGTCTCAGTTTCTTGCAAAGGTTAAATATAATGATAGATGTTGCATCTGCATTGGAATATCTTCATCATGGTTCTTCAATGCCTGTGGTTCATTGTGATCTAAAGCCTTCTAATGTCTTGTTGGATGAAAATATGGTTGCACATGTTAGCGATTTTGGTATTGCCAAGCTCATGGATGAAGGACAATCTCAAACTTACACACAAACTTTAGCTACTATTGGATACCTTGCACCAGAGTATGGATCTAAAGGAATTGTTTCCGTCAAAGGAGATGTGTACAGCTATGGGATCATGTTAATGGAAATCTTTACAAGAAGAAAGCCAACAGATGATATGTTTGTTCCAGAACTAAGCCTGAAGACATGGATCAGTGGATCATTTCCTAATTCAATTATGGAGATCTTGGATTCAAATTTAGTCCAACAAATTGGGGAACAAATTGATGACATATTGACTTACATGTCATCTATTTTTGGTTTAGCCCTGAATTGTTGTGAAGATTCACCTGAAGCAAGAATTAATATTGCAGATGTTATTGCGTCGCTAATCAAAATCAAGACTTTGGTTCTTAGCGCAAGCAGGGTCTAG 2961 0.3576 MVNLLSCILLFLLSLHCFVACLAVNTKNITTDQYALLAFKSLITSDPYDILSKNWSTSSSVCNWVGVTCDERHGRVRSLILRNMSLKGTVSPNLGNLSFLVILDLKNNSFGGQFLTEVCRLRRLKVLHISYNKFEGGIPAALEDLSQLQYLYLAANNFSGSVPQSIGKLRQLKVLDTFQNRLSGPIPQSISNLSSLEYIDLSSNYFSGTIPEEIGYLDKLELLVLGDNRLSGSIPSKIFNLSSLTALVVENNSLSGTIPSNTGYSLPSLQYLFLNDNNFVGNILNNIFNSSKLIVFQLHSNVFSGTLPNTAFEDLGLLESIRISNNNLTIEDSHQFFTSLTNCRYLKYLELSGNHISNLPKSIGNLTSEFFRAESCGIGGYIPLEVGNMSNLLSFDLYYNNINGPIPGTFKGLQKFQYLDLSSNGLQGSFIEEFCEMKSLGELYLDNNKLSGVLPTCLGNMTSIIRINVGSNSLNSRIPLSLWSLRDILEINFSSNSLIGNLPPEIGNLRAIILLDLSRNQISSNIPTIISSLQTLQNLVLAQNKLIGSIPKSLGQMVSLISLDLSQNMLTGVIPKSLESLLYLQNINFSYNRLQGEIPDGGHFKNFTAQSFMHNDALCGDPRLLVPTCGKQVKKWSMEKKLILKCILSIVVSAILVVACIILLKHNKRKKNETSLERGLSTLGTPRRISYYELLQATNGFNESNFLGRGGFGSVYQGKLLDGEMIAVKVIDLQSEAKSKSFDAECNAMRNLRHRNLVKIISSCSNLDFKSLVMEFMSNGSVDKWLYSNNYCLSFLQRLNIMIDVASALEYLHHGSSMPVVHCDLKPSNVLLDENMVAHVSDFGIAKLMDEGQSQTYTQTLATIGYLAPEYGSKGIVSVKGDVYSYGIMLMEIFTRRKPTDDMFVPELSLKTWISGSFPNSIMEILDSNLVQQIGEQIDDILTYMSSIFGLALNCCEDSPEARINIADVIASLIKIKTLVLSASRV* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1837 986 SUPERFAMILY L domain-like 375 622 - -
Mtr8g1837 986 Gene3D Ribonuclease Inhibitor 370 631 IPR032675 -
Mtr8g1837 986 Pfam Leucine rich repeat 219 279 IPR001611 GO:0005515
Mtr8g1837 986 Pfam Leucine rich repeat 122 182 IPR001611 GO:0005515
Mtr8g1837 986 ProSitePatterns Serine/Threonine protein kinases active-site signature. 820 832 IPR008271 GO:0004672|GO:0006468
Mtr8g1837 986 Gene3D Phosphorylase Kinase; domain 1 683 776 - -
Mtr8g1837 986 SUPERFAMILY Protein kinase-like (PK-like) 680 973 IPR011009 -
Mtr8g1837 986 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 136 190 - -
Mtr8g1837 986 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 171 980 - -
Mtr8g1837 986 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 11 146 - -
Mtr8g1837 986 Gene3D Ribonuclease Inhibitor 29 189 IPR032675 -
Mtr8g1837 986 SMART LRR_sd22_2 557 578 - -
Mtr8g1837 986 SMART LRR_sd22_2 340 368 - -
Mtr8g1837 986 SMART LRR_sd22_2 169 195 - -
Mtr8g1837 986 SMART LRR_sd22_2 217 243 - -
Mtr8g1837 986 SMART LRR_sd22_2 389 421 - -
Mtr8g1837 986 Gene3D Transferase(Phosphotransferase) domain 1 777 982 - -
Mtr8g1837 986 SMART LRR_typ_2 437 460 IPR003591 -
Mtr8g1837 986 SMART LRR_typ_2 241 265 IPR003591 -
Mtr8g1837 986 SMART LRR_typ_2 509 533 IPR003591 -
Mtr8g1837 986 SMART LRR_typ_2 145 169 IPR003591 -
Mtr8g1837 986 SMART LRR_typ_2 389 412 IPR003591 -
Mtr8g1837 986 SMART LRR_typ_2 340 366 IPR003591 -
Mtr8g1837 986 SMART LRR_typ_2 193 217 IPR003591 -
Mtr8g1837 986 SMART LRR_typ_2 266 290 IPR003591 -
Mtr8g1837 986 SMART LRR_typ_2 557 580 IPR003591 -
Mtr8g1837 986 SUPERFAMILY L domain-like 31 328 - -
Mtr8g1837 986 ProSitePatterns Protein kinases ATP-binding region signature. 707 729 IPR017441 GO:0005524
Mtr8g1837 986 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 11 146 - -
Mtr8g1837 986 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 171 980 - -
Mtr8g1837 986 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 136 190 - -
Mtr8g1837 986 Pfam Protein kinase domain 702 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1837 986 SMART serkin_6 701 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1837 986 ProSiteProfiles Protein kinase domain profile. 701 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1837 986 Pfam Leucine Rich Repeat 559 581 IPR001611 GO:0005515
Mtr8g1837 986 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Mtr8g1837 986 ProSiteProfiles Leucine-rich repeat profile. 345 366 IPR001611 GO:0005515
Mtr8g1837 986 Gene3D Ribonuclease Inhibitor 190 369 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1837 Mtr-Chr8 27660851 27672541 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1837 31 986 Receptor kinase-like Gene Family AT3G47570 38.322 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr8g1837 Pkinase 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1837 - K13420 mtr:MTR_8g465340 1243.02