Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1833 ATGACTTCTTTGAGGGTGGTCAAATTTGGCTATAACAATTTGAATGGCAACTTACCAAATGATTTTTTCAATCAGCTACCTCAACTTGAAAACTTTATTTTAAAGAACAATCAATTTGAAGGAAGCATTCCACAATCAATTGGTAACTGCACATCGTTGATATACATAAATTTAGCATCAAACTTTTTGACAGGTACGATTCCCGAGGAGATTGGCTATCTTGATAAACTTGAGCTGCTAATATTGTATAACAATAGGTTAAGTGGATCTATTCCTTCCAAAATCTTCAACATGTCATCACTCACATCTTTGGGGGTTGATCAGAATAGCCTCTCAGGCACAATTCCATCAAATACGGGATATAGCCTTCCTAGTCTACAATATCTATTCTTGAATGATAACAATTTTGTTGGAAATATTCCAAATAACATATTCAACTGTTCTAATCTTATTCAATTTCAATTGAATGGCAATGCATTCACTGGAACTCTACCCAATACTGCTTTTGGAGATTTAGGATTGCTTAAATCGTTTCTCATAGATGACAACAATTTGACAATAGAAGATTCTCATCAATTCTTTACTTCCTTGACAAATTGTAGATATTTGAAATATCTAGACTTATCCGGGAATCATATACCCAATCTTCCTAAGTCAATTGGAAACATAACTTCAGAATACATCAGGGCACAATCATGTGGAATTGGTGGTTATATTCCCCTAGAAGTTGGAAACATGAGCAACTTGCTACAATTTTCTCTTTCTGGGAATAATATAACTGGACCAATACCTCCTACATTCAAAAGGTTGCAGAAACTTCAGGTTTTGAATCTTAGCAACAATGGACTACAAGGATCATTTATTGAGGAACTTTGTGAAATGAAGAGTTTGGGTGAGTTGTATCTACAAAATAATAAGCTCTCTGGAGTTTTACCAACATGTTTGGGAAATATGATTTCTCTTATAAGGATACATGTAGGATCTAACAGTTTGAACTCTAGAATACCTTTATCTCTTTGGAGGCTTAGAGATATATTAGAGATAAATTTTTCATCAAATTCTTTAATTGGTATTCTTCCACCTGAGATTGGGAATTTGAGAGCAATTGTACTATTAGACCTATCAAGAAATCAGATTTCAAGCAACATTCCAACAACCATTAATTCCTTATTAACATTGCAGAATCTCTCCTTAGCAGATAATAAACTGAATGGTTCAGTTCCCAAATCACTTGGTGAAATGGTAAGCTTGATCTCTTTGGACTTGTCCCAAAATATGTTAACTGGTGTTATTCCAAAATCCTTAGAATCACTTTTGTATCTTCAAAACATCAACTTCTCATATAATAGATTACAAGGAGAGATTCCTGATGGTGGACGGTTCAAAAATTTCACAGCTCAATCATTTATGCATAATGATGCACTTTGTGGTGATCCTCGCCTTCAAGTACCTACATGTGGTAAGCAAGTTAAGAAATGGTCAATGGAAAAAAAGCTTATATTGAAATGCATACTTCCTATAGTTGTGTCAGTCGTTTTGATTGTTGCGTGCATCATACTTTTAAAACATAATAAAAGGAGAAAGAATAAAAATAATGTTGGAAGGGGTTTGTCAACTTTGGGAGCTCCAAGAAGAATATCCTATTATGAAATTGTGCAAGCAACTAATGGATTCAATGAGAGTAATTTCCTTGGAAGGGGGGGATTTGGCTCTGTTTATCAGGGGAAGCTTCTTGATGGTGAGATGATTGCCGTTAAAGTAATTGATTTGCAATCAGAAGCAAAATCAAAGAGCTTTGATGCAGAATGCAATGCGATGAGAAATCTACGACATCGGAATCTGGTAAAGATTATCAGCAGTTGCTCAAATCTTGATTTCAAATCATTGGTGATGGAGTTCATGTCAAATGGAAGTGTAGACAAATGGTTATATTCAAATAACTATTGTCTAAATTTCTTGCAAAGGTTAAATATAATGATAGATGTTGCATATGCATTGGAATATCTCCATCATGGTTCTTCAATGCCTGTGGTTCATTGTGATCTAAAGCCTTCGAATGTCTTGTTGGATGAAAATATGGTTGCACATGTTAGTGATTTTGGTATTGCAAAGCTCATGGATGAAGGACAATCTCAAACTCTTACACAAACTTTGGCTACTGTTGGATACATCGCACCAGAGTATGGATCTAAAGGAATTGTTTCTGTCAAAGGAGATGTGTACAGCTATGGGATTATGCTTATGGAAATCTTCACAAGAAAAAAGCCAACAGATGATATGTTTGTTGCAGAACTAAGCTTGAAGACATGGATCAGTCGATCATTGCCTAATTCCATTATGGAGGTCATGGATTCAAATTTAGTCCAAATAACTGGGGACCAAATTGATTATATATTGACTCACATGTCATCTATTTTTAGTTTAGCCTTGAGTTGTTGTGAAGATTCACTTGAAGCAAGAATCAATATGGCAGATGTTATTGCGACGCTAATCAAAATCAACACTTTGGTTGTTGGCGCAAACACAGTCTAG 2532 0.3499 MTSLRVVKFGYNNLNGNLPNDFFNQLPQLENFILKNNQFEGSIPQSIGNCTSLIYINLASNFLTGTIPEEIGYLDKLELLILYNNRLSGSIPSKIFNMSSLTSLGVDQNSLSGTIPSNTGYSLPSLQYLFLNDNNFVGNIPNNIFNCSNLIQFQLNGNAFTGTLPNTAFGDLGLLKSFLIDDNNLTIEDSHQFFTSLTNCRYLKYLDLSGNHIPNLPKSIGNITSEYIRAQSCGIGGYIPLEVGNMSNLLQFSLSGNNITGPIPPTFKRLQKLQVLNLSNNGLQGSFIEELCEMKSLGELYLQNNKLSGVLPTCLGNMISLIRIHVGSNSLNSRIPLSLWRLRDILEINFSSNSLIGILPPEIGNLRAIVLLDLSRNQISSNIPTTINSLLTLQNLSLADNKLNGSVPKSLGEMVSLISLDLSQNMLTGVIPKSLESLLYLQNINFSYNRLQGEIPDGGRFKNFTAQSFMHNDALCGDPRLQVPTCGKQVKKWSMEKKLILKCILPIVVSVVLIVACIILLKHNKRRKNKNNVGRGLSTLGAPRRISYYEIVQATNGFNESNFLGRGGFGSVYQGKLLDGEMIAVKVIDLQSEAKSKSFDAECNAMRNLRHRNLVKIISSCSNLDFKSLVMEFMSNGSVDKWLYSNNYCLNFLQRLNIMIDVAYALEYLHHGSSMPVVHCDLKPSNVLLDENMVAHVSDFGIAKLMDEGQSQTLTQTLATVGYIAPEYGSKGIVSVKGDVYSYGIMLMEIFTRKKPTDDMFVAELSLKTWISRSLPNSIMEVMDSNLVQITGDQIDYILTHMSSIFSLALSCCEDSLEARINMADVIATLIKINTLVVGANTV* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1833 843 SMART LRR_typ_2 197 223 IPR003591 -
Mtr8g1833 843 SMART LRR_typ_2 294 317 IPR003591 -
Mtr8g1833 843 SMART LRR_typ_2 366 390 IPR003591 -
Mtr8g1833 843 SMART LRR_typ_2 74 98 IPR003591 -
Mtr8g1833 843 SMART LRR_typ_2 1 25 IPR003591 -
Mtr8g1833 843 SMART LRR_typ_2 123 147 IPR003591 -
Mtr8g1833 843 SMART LRR_typ_2 270 289 IPR003591 -
Mtr8g1833 843 SMART LRR_typ_2 26 50 IPR003591 -
Mtr8g1833 843 SMART LRR_typ_2 414 437 IPR003591 -
Mtr8g1833 843 Gene3D Ribonuclease Inhibitor 175 494 IPR032675 -
Mtr8g1833 843 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 28 838 - -
Mtr8g1833 843 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 3 56 - -
Mtr8g1833 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 677 689 IPR008271 GO:0004672|GO:0006468
Mtr8g1833 843 Gene3D Ribonuclease Inhibitor 122 170 IPR032675 -
Mtr8g1833 843 SUPERFAMILY L domain-like 2 284 - -
Mtr8g1833 843 ProSiteProfiles Leucine-rich repeat profile. 202 223 IPR001611 GO:0005515
Mtr8g1833 843 ProSiteProfiles Protein kinase domain profile. 558 837 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1833 843 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 3 56 - -
Mtr8g1833 843 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 28 838 - -
Mtr8g1833 843 SMART serkin_6 558 837 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1833 843 Pfam Protein kinase domain 559 825 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1833 843 Gene3D Phosphorylase Kinase; domain 1 541 633 - -
Mtr8g1833 843 ProSitePatterns Protein kinases ATP-binding region signature. 564 586 IPR017441 GO:0005524
Mtr8g1833 843 SUPERFAMILY L domain-like 229 479 - -
Mtr8g1833 843 Gene3D Transferase(Phosphotransferase) domain 1 634 838 - -
Mtr8g1833 843 Gene3D Ribonuclease Inhibitor 1 121 IPR032675 -
Mtr8g1833 843 SUPERFAMILY Protein kinase-like (PK-like) 535 831 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1833 Mtr-Chr8 27621250 27630901 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1833 1 833 Receptor kinase-like Gene Family AT3G47570 36.629 3.22e-175 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr8g1833 Pkinase 9.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1833 - K13420 mtr:MTR_8g465340 1216.83