Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1832 ATGGTGAATCTATTATCTTGTCTCTTACTAATTGTTTTGTTATCATTGCATTGTTTTGTGGCTTGCTTAGCTGCGAATATAAAAAACATCACAACTGATCAACATGTTCTTCTAGCATTCAAATCCCTGATTACTTCAGACCCATATGATATGTTGGCTAATAATTGGTCAACCTCCTCTTCTGTATGCAATTGGGTTGGTGTAACTTGTGATGAGCGACACAATAGAGTCCATAGTTTGATCCTCCAAAACATGAGTCTTAGAGGTACCGTTTCCCCAAACTTGGGGAATCTGTCCTTTCTTGTTATACTTGACCTAAAAAATAATAGCTTCGGTGGTCAGTTTCCTACGGAGGTATGTCGGTTGCGCCGATTAAAGGTTCTTCATATCAGCTACAACGAGTTTGAAGGGGGGATTCCTGCAGCGTTGTGGGACTTATCACAACTTCAATATTTGTATCTTGGCGCTAACAATTTTACTGGTTTTATCCCCGAATCTATTGGCAACCTTCGGTGGTTGAAAGAATTGGATACTAGCAACAACAGATTGTCTGGGCCCATACCTCAAACAATTTCAAACATGTCTTCACTCGAAGTTCTCCATTTATTTTCTAACTACTTTTCAGGTGAAATTCCATCGCTTAACAACATGACTTCTTTGAAGGTGGTCAAATTTGGCGTTAACAATTTAAATGGAAGATTACCAAATGATTTTTTCAATCAGCTTCCTCAACTTCAAATTTTTACATTACACAACAATCAATTTGAAGGAAGCATTCCACAATCAATTGGTAACTGCACATCGCTATTATACTTAAGTTTATCATCAAACTTTCTCACAGGCGACATATCATCGATTTTCAAATTCAACAACTCATTGTTGCAAGATTTGTATCTTAGCTATAATAATTTGTCAGGCAATCTTCCATCAAATATTTGTCATGGGCTTCCAAATCTAAGAATATTTCATATTTATCATAATGATATTTCCGGTGAGATGCCGACTATCTGGCATCAATGTGAAGAGATGGAGGGATTAGATCTATCATTCAATAGTTTTAACAAAGGACCCATGCCAGGTGGCATCCGAAACATGACCAAACTTCAACAACTATATCTTATGGGCAACAACTTGGAGGGTGAAATTCCATCGTTTAACAGCATGACTTCTTTGAGGGTGGTCAAATTTAGCTATAACAATTTGAATGGCAACTTACCAAATGATTTTTTCAATCAGCTACCTCAACTTGAAAACTGTAATTTACACAACAATCAATTTGAAGGAAGCATTCCACGATCAATTGGTAACTGCACATCATTGATATACATAAATTTAGCATCAAACTTTTTGACAGGTACGATTCCCGAGGAGATTGGCTATCTTGATAAACTTGAGGTGTTATACTTGTCTAACAATAGCTTAAGTGGATCTATTCCTTCCAAAATCTTCAACTTGTCATCACTCATTGATTTGGGGGTTGAACAGAATAGCCTCTCAGGCACAATTCCATTAAATACAGGATATAGCCTTCCTAACCTGCAACGTCTACACTTGTATCAAAACAATTTTGTTGGAAATATTCCAAATAACATATTCAACTCTTCTAAGCTCCGTCAAATCGCATTGGACGAAAATGCATTCAGTGGAAATCTACCCAATACTGCTTTTGGAGATTTAAGATTCCTTGAAATGTTTTTCATATATAACAACAAATTGACAATAGAAGATTCTCATCAATTCTTTACTTCCTTGACAAATTGTAGATATTTGAAATATCTTGACTTATCAGGTAATCATATATCCAATCTTCCTAAGTCAATTGGAAACATAACTTCAGAATACATCAGGGCAGAATCATGTGGAATTGGTGGTTATATTCCCCTAGAAGTTGGAAACATGACCAACTTGCTATCTTTTGATCTGTTTAACAATAATATAAATGGACCAATACCTCGATCAGTCAAACGGCTAGAGAAGCTTCAAGTATTGTCTCTTGGTTACAATGCACTCAAAGGATCATTCATTGATGAGCTCTGTCTAATTAAGAGTTTAGGTGAGTTGTATCTAGAAAATAATAAGCTTTCTGGTGTTTTACCAACATGTTTGGGAAATATGACTTCTCTTAGAATATTGAACGTAGGATCTAACAATTTGAACTCTAAGATACCTTCATCTCTTTGGGGTCTCACAGATATATTAATATTAGATTTGTCCTCCAATGCTTTTATTGGTGATTTTCCACCCGATATTGGGAATTTGAGAGAGCTTGTAATATTAGATCTATCAAGAAATCAAATTTCAAGCAACATTCCTACAACCATCAGTTCCTTACAAAATTTGCAGAATCTCTCCTTAGCTCATAATAAATTGAATGGGTCAATTCCCGCATCACTGAATGGAATGGTAAGCTTGATCTCTTTGGACTTGTCTCAAAATATGTTAACTGGTGTTATTCCAAAATCCTTAGAATCACTTTTGTACCTTCAAAACATCAACTTCTCATATAATAGATTACAAGGAGAGATTCCTAATGGTGGACATTTCAAAAATTTCACAGCTCAATCATTTATGCATAATGAAGCACTCTGCGGTGATCCTCGCCTTCAAGTACCTACATGTGGTAAGCAAGTTAAGAAATGGTCCATGGAAAAAAAGCTTATATTGAAATGCATACTTCCCATAGTTGTGTCAGCCATTTTGGTTGTTGCGTGCATCATACTTTTAAAGCATAATAAAAGGAAAAAGAACAAAACTTCTCTTGAAAGGGGTTTGTCAACTTTGGGAGCTCCAAGAAGAATATCCTATTATGAAATTGTGCAAGCAACTAATGGATTCAATGAGAGTAATTTCCTTGGAAGGGGGGGATTTGGCTCTGTTTATCAGGGCAAGCTTCTTGATGGTGAGATGATTGCCGTTAAAGTAATTGATTTGCAATCAGAGGCAAAATCAAAGAGCTTTGATGCAGAATGCAATGCAATGAGAAATCTACGACATCGAAATATGGTTAAGATTATCAGCAGTTGTTCAAATCTTGATTTCAAATCATTGGTGATGGAGTTCATGTCTAATGGAAGTGTGGACAATTGGTTATATTCAGTTAACCATTGCTTAAATTTCTTGCAAAGGTTAAATATAATGATAGATGTTGCATCTGCATTGGAATATCTCCATCATGGTTCTTCAGTACCAGTGGTTCATTGCGATCTAAAGCCTTCTAATGTCTTATTGGATGAAAATATGGTTGCACATGTAAGCGATTTTGGTATTGCCAAGCTCATGGATGAAGGACAATCTAAAACTCATACACAAACTTTGGCTACTATTGGATACCTTGCACCAGAGTATGGATCTAAGGGAATTGTTTCTGTCAAAGGAGATGTGTACAGCTATGGGATCATGTTAATGGAAATCTTCACAAGAAGAAAGCCAACAGATGATATGTTTGTTGCTGAACTAAACTTGAAGACATGGATCAGTGGATCATTTCCTAATTCAATTATGGAGGTCTTGGATTCAAATTTAGTCCAACAAATTGGCGAACAAATTGATGACATATTGATTTACATGTCATCTATTTTTGGTTTAGCCCTGAATTGTTGCGAAGATTCACCTGAAGCAAGAATTAATATTGCAGATGTTATTGCGTCGTTAATCAAAATCAAGACTTTGGTTCTTAGCGCAAGCAGGGTCTAG 3693 0.3596 MVNLLSCLLLIVLLSLHCFVACLAANIKNITTDQHVLLAFKSLITSDPYDMLANNWSTSSSVCNWVGVTCDERHNRVHSLILQNMSLRGTVSPNLGNLSFLVILDLKNNSFGGQFPTEVCRLRRLKVLHISYNEFEGGIPAALWDLSQLQYLYLGANNFTGFIPESIGNLRWLKELDTSNNRLSGPIPQTISNMSSLEVLHLFSNYFSGEIPSLNNMTSLKVVKFGVNNLNGRLPNDFFNQLPQLQIFTLHNNQFEGSIPQSIGNCTSLLYLSLSSNFLTGDISSIFKFNNSLLQDLYLSYNNLSGNLPSNICHGLPNLRIFHIYHNDISGEMPTIWHQCEEMEGLDLSFNSFNKGPMPGGIRNMTKLQQLYLMGNNLEGEIPSFNSMTSLRVVKFSYNNLNGNLPNDFFNQLPQLENCNLHNNQFEGSIPRSIGNCTSLIYINLASNFLTGTIPEEIGYLDKLEVLYLSNNSLSGSIPSKIFNLSSLIDLGVEQNSLSGTIPLNTGYSLPNLQRLHLYQNNFVGNIPNNIFNSSKLRQIALDENAFSGNLPNTAFGDLRFLEMFFIYNNKLTIEDSHQFFTSLTNCRYLKYLDLSGNHISNLPKSIGNITSEYIRAESCGIGGYIPLEVGNMTNLLSFDLFNNNINGPIPRSVKRLEKLQVLSLGYNALKGSFIDELCLIKSLGELYLENNKLSGVLPTCLGNMTSLRILNVGSNNLNSKIPSSLWGLTDILILDLSSNAFIGDFPPDIGNLRELVILDLSRNQISSNIPTTISSLQNLQNLSLAHNKLNGSIPASLNGMVSLISLDLSQNMLTGVIPKSLESLLYLQNINFSYNRLQGEIPNGGHFKNFTAQSFMHNEALCGDPRLQVPTCGKQVKKWSMEKKLILKCILPIVVSAILVVACIILLKHNKRKKNKTSLERGLSTLGAPRRISYYEIVQATNGFNESNFLGRGGFGSVYQGKLLDGEMIAVKVIDLQSEAKSKSFDAECNAMRNLRHRNMVKIISSCSNLDFKSLVMEFMSNGSVDNWLYSVNHCLNFLQRLNIMIDVASALEYLHHGSSVPVVHCDLKPSNVLLDENMVAHVSDFGIAKLMDEGQSKTHTQTLATIGYLAPEYGSKGIVSVKGDVYSYGIMLMEIFTRRKPTDDMFVAELNLKTWISGSFPNSIMEVLDSNLVQQIGEQIDDILIYMSSIFGLALNCCEDSPEARINIADVIASLIKIKTLVLSASRV* 1231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1832 1230 Pfam Leucine rich repeat 414 474 IPR001611 GO:0005515
Mtr8g1832 1230 Pfam Leucine rich repeat 683 741 IPR001611 GO:0005515
Mtr8g1832 1230 Pfam Leucine rich repeat 148 206 IPR001611 GO:0005515
Mtr8g1832 1230 Gene3D Phosphorylase Kinase; domain 1 928 1020 - -
Mtr8g1832 1230 Pfam Protein kinase domain 946 1214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1832 1230 SUPERFAMILY Protein kinase-like (PK-like) 922 1217 IPR011009 -
Mtr8g1832 1230 ProSiteProfiles Leucine-rich repeat profile. 463 485 IPR001611 GO:0005515
Mtr8g1832 1230 SUPERFAMILY L domain-like 617 866 - -
Mtr8g1832 1230 Gene3D Transferase(Phosphotransferase) domain 1 1021 1226 - -
Mtr8g1832 1230 SMART LRR_typ_2 242 266 IPR003591 -
Mtr8g1832 1230 SMART LRR_typ_2 316 339 IPR003591 -
Mtr8g1832 1230 SMART LRR_typ_2 705 729 IPR003591 -
Mtr8g1832 1230 SMART LRR_typ_2 777 800 IPR003591 -
Mtr8g1832 1230 SMART LRR_typ_2 292 315 IPR003591 -
Mtr8g1832 1230 SMART LRR_typ_2 584 610 IPR003591 -
Mtr8g1832 1230 SMART LRR_typ_2 681 704 IPR003591 -
Mtr8g1832 1230 SMART LRR_typ_2 388 412 IPR003591 -
Mtr8g1832 1230 SMART LRR_typ_2 801 824 IPR003591 -
Mtr8g1832 1230 SMART LRR_typ_2 461 485 IPR003591 -
Mtr8g1832 1230 SMART LRR_typ_2 413 437 IPR003591 -
Mtr8g1832 1230 SMART LRR_typ_2 98 122 IPR003591 -
Mtr8g1832 1230 SMART LRR_typ_2 753 776 IPR003591 -
Mtr8g1832 1230 SMART LRR_typ_2 510 534 IPR003591 -
Mtr8g1832 1230 SMART LRR_typ_2 146 170 IPR003591 -
Mtr8g1832 1230 Gene3D Ribonuclease Inhibitor 295 507 IPR032675 -
Mtr8g1832 1230 SMART LRR_sd22_2 753 772 - -
Mtr8g1832 1230 SMART LRR_sd22_2 584 612 - -
Mtr8g1832 1230 SMART LRR_sd22_2 777 800 - -
Mtr8g1832 1230 SMART LRR_sd22_2 801 822 - -
Mtr8g1832 1230 SMART LRR_sd22_2 170 196 - -
Mtr8g1832 1230 SMART LRR_sd22_2 559 579 - -
Mtr8g1832 1230 SMART LRR_sd22_2 657 677 - -
Mtr8g1832 1230 SMART LRR_sd22_2 461 487 - -
Mtr8g1832 1230 Gene3D Ribonuclease Inhibitor 142 190 IPR032675 -
Mtr8g1832 1230 Gene3D Ribonuclease Inhibitor 32 141 IPR032675 -
Mtr8g1832 1230 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Mtr8g1832 1230 SUPERFAMILY L domain-like 43 399 - -
Mtr8g1832 1230 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 290 426 - -
Mtr8g1832 1230 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 355 454 - -
Mtr8g1832 1230 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 11 145 - -
Mtr8g1832 1230 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 414 1224 - -
Mtr8g1832 1230 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 145 288 - -
Mtr8g1832 1230 SMART serkin_6 945 1224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1832 1230 Gene3D Ribonuclease Inhibitor 191 294 IPR032675 -
Mtr8g1832 1230 ProSiteProfiles Protein kinase domain profile. 945 1224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1832 1230 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 355 454 - -
Mtr8g1832 1230 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 145 288 - -
Mtr8g1832 1230 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 11 145 - -
Mtr8g1832 1230 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 290 426 - -
Mtr8g1832 1230 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 414 1224 - -
Mtr8g1832 1230 Pfam Leucine Rich Repeat 803 825 IPR001611 GO:0005515
Mtr8g1832 1230 Gene3D Ribonuclease Inhibitor 508 881 IPR032675 -
Mtr8g1832 1230 ProSiteProfiles Leucine-rich repeat profile. 589 610 IPR001611 GO:0005515
Mtr8g1832 1230 ProSitePatterns Protein kinases ATP-binding region signature. 951 973 IPR017441 GO:0005524
Mtr8g1832 1230 SUPERFAMILY L domain-like 310 603 - -
Mtr8g1832 1230 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1064 1076 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1832 Mtr-Chr8 27580803 27615941 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1832 32 566 Receptor kinase-like Gene Family AT3G47570 35.325 6.11e-78 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr8g1832 Pkinase 4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1832 - K13420 mtr:MTR_8g469650 1298.11