Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1830 ATGTCATCACTTACATATTTGTATCCTGACCAAAATCACCTCTCTGGGATAATTCCTTCAAATACGGGATATAGCCTTCCTAACCTGCAATATCTATTCTTGAATGATAACAATTTTGTTGGAAATATTCCAAATAACATATTCAACTGTTCTAATCTTATTCAATTTCAATTGAATGGCAATGCATTCACTGGAACTCTACCCAATACTGCTTTTGGAGATTTAGGATTGCTTGAATCGTTTCTCATAGATGACAACAATTTGACAATAGAAGATTCTCATCAATTCTTTACTTCCTTGACAAATTGTAGATATTTGAAATATCTAGACTTATCCGGGAATCATATACCCAATCTTCCTAAGTCAATTGGAAACATAACTTCAGAATACATCAGGGCACAATCATGTGGAATTGGTGGTTATATTCCCCTAGAAGTTGGAAACATGAGCAACTTGCTACAATTTTCTCTTTCTGGGAATAATATAACTGGACCAATACCTCCTACATTCAAAAGGTTGCAGAAACTTCAGGTTTTGAATCTTAGCAACAATGGACTACAAGGATCATTTATTGAGGAACTTTGTGAAATGAAGAGTTTGGGTGAGTTGTATCAACAAAATAATAAGCTCTCTGGAGTTTTACCAACATGTTTGGGAAATATGATTTCTCTTATAAGGATACATGTAGGATCTAACAGTTTGAACTCTAGAATACCTTTATCTCTTTGGAGGCTTAGAGATATATTAGAGATAAATTTTTCATCAAATTCTTTAATTGGTATTCTTCCACCTGAGATTGGGAATTTGAGAGCAATTGTACTATTAGACCTATCAAGAAATCAGATTTCAAGCAACATTCCAACAACCATTAATTCCTTATTAACATTGCAGAATCTCTCCTTAGCAGATAATAAACTGAATGGTTCAATTCCCAAATCACTTGGTGAAATGGTAAGCTTGATCTCTTTGGACTTGTCCGAAAATATGTTAACTGGTGTTATTCCAAAATCCTTAGAATCACTTTTGTATCTTCAAAACATCAACTTCTCATATAATAGATTACAAGGAGAGATTCCTGATGGTGGACGGTTCAAAAATTTCACAGCTCAATCATTTATGCATAATGATGCACTTTGTGGTGATCCTCGCCTTCAAGTACCTACATGTGGTAAGCAAGTTAAGAAATGGTCAATGGAAAAAAAGCTTATATTGAAATGCATACTTCCCATAGTTGTGTCAGCCATTTTGGTTGTTGCATGCATCATACTTTTAAAACATAATAAAAGGAGAAAGAATGAAAATACTCTTGAAAGGGGTTTGTCAACTTTAGGAGCTCCAAGAAGAATATCATATTATGAACTTTTGCAAGCAACTAATGGATTAAATGAGAGTAATTTCCTTGGAAGGGGGGGATTTGGCTCTGTTTATCAGGGGAAGCTTCTTGATGGTGAGATGATTGCAGTTAAAGTAATTGATTTGCAATCAGAGGCAAAATCAAAGAGCTTTGATGTAGAATGCAATGCAATGAGAAATCTACGACATCGAAATCTGGTAAAGATTATCAGTAGTTGCTCAAATCTTGATTTCAAATCATTGGTGATGGAGTTCATGTCAAATGGAAGTGTTGACAAATGGTTATATTCAAATAACTATTGTCTAAATTTCTTACAAAGGTTAAATATAATGATAGATGTTGCATCTGCATTGGAATATCTTCATCATGGTTCTTCAATACCTGTGGTTCATTGTGATCTAAAGCCTTCCAATGTCTTATTGGATAAAAATATGGTTGCACATGTTAGCGATTTTGGTATTGCCAAGCTCATGGATGAAGGACAATCTCAAACTCATACACAAACTTTGGCTACTATTGGATATCTTGCACCAGAGTATGGTTCTAGAGGAATTGTTTCTGTCAAAGGAGACGTGTACAGCTATGGGATCATGTTAATGGAAATCTTCACAAGAAGAAAGCCAACAGATGATATGTTTGTTGCAGAACTAAGCTTGAAGACATGGATCAGTCAATCATTGCCTAATTCCATTATGGAGGTCATGGATTCAAATTTAGTCCAAATAACTGGGGACCAAATTGATGATCTATCGACTCACATATCATCTATTTTTAGTTTAGCCCTGAGTTGTTGTGAAGATTCACCTAAAGCAAGAATCAATATGGCAGATGTTATTGCGACGCTAATCAAAATCAACACTTTGGTTGTTGGCGCAAACACAGTCTAG 2241 0.3485 MSSLTYLYPDQNHLSGIIPSNTGYSLPNLQYLFLNDNNFVGNIPNNIFNCSNLIQFQLNGNAFTGTLPNTAFGDLGLLESFLIDDNNLTIEDSHQFFTSLTNCRYLKYLDLSGNHIPNLPKSIGNITSEYIRAQSCGIGGYIPLEVGNMSNLLQFSLSGNNITGPIPPTFKRLQKLQVLNLSNNGLQGSFIEELCEMKSLGELYQQNNKLSGVLPTCLGNMISLIRIHVGSNSLNSRIPLSLWRLRDILEINFSSNSLIGILPPEIGNLRAIVLLDLSRNQISSNIPTTINSLLTLQNLSLADNKLNGSIPKSLGEMVSLISLDLSENMLTGVIPKSLESLLYLQNINFSYNRLQGEIPDGGRFKNFTAQSFMHNDALCGDPRLQVPTCGKQVKKWSMEKKLILKCILPIVVSAILVVACIILLKHNKRRKNENTLERGLSTLGAPRRISYYELLQATNGLNESNFLGRGGFGSVYQGKLLDGEMIAVKVIDLQSEAKSKSFDVECNAMRNLRHRNLVKIISSCSNLDFKSLVMEFMSNGSVDKWLYSNNYCLNFLQRLNIMIDVASALEYLHHGSSIPVVHCDLKPSNVLLDKNMVAHVSDFGIAKLMDEGQSQTHTQTLATIGYLAPEYGSRGIVSVKGDVYSYGIMLMEIFTRRKPTDDMFVAELSLKTWISQSLPNSIMEVMDSNLVQITGDQIDDLSTHISSIFSLALSCCEDSPKARINMADVIATLIKINTLVVGANTV* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1830 746 ProSitePatterns Serine/Threonine protein kinases active-site signature. 580 592 IPR008271 GO:0004672|GO:0006468
Mtr8g1830 746 ProSitePatterns Protein kinases ATP-binding region signature. 467 489 IPR017441 GO:0005524
Mtr8g1830 746 Gene3D Transferase(Phosphotransferase) domain 1 537 741 - -
Mtr8g1830 746 SUPERFAMILY Protein kinase-like (PK-like) 441 734 IPR011009 -
Mtr8g1830 746 Gene3D Ribonuclease Inhibitor 1 397 IPR032675 -
Mtr8g1830 746 Pfam Protein kinase domain 463 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1830 746 SUPERFAMILY L domain-like 132 382 - -
Mtr8g1830 746 ProSiteProfiles Protein kinase domain profile. 461 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1830 746 ProSiteProfiles Leucine-rich repeat profile. 105 126 IPR001611 GO:0005515
Mtr8g1830 746 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 741 - -
Mtr8g1830 746 SUPERFAMILY RNI-like 2 188 - -
Mtr8g1830 746 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 2 741 - -
Mtr8g1830 746 SMART LRR_typ_2 26 50 IPR003591 -
Mtr8g1830 746 SMART LRR_typ_2 269 293 IPR003591 -
Mtr8g1830 746 SMART LRR_typ_2 100 126 IPR003591 -
Mtr8g1830 746 SMART LRR_typ_2 173 197 IPR003591 -
Mtr8g1830 746 SMART LRR_typ_2 317 340 IPR003591 -
Mtr8g1830 746 Gene3D Phosphorylase Kinase; domain 1 444 536 - -
Mtr8g1830 746 SMART serkin_6 461 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1830 Mtr-Chr8 27562812 27565345 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1830 1 736 Receptor kinase-like Gene Family AT3G47570 37.891 1.40e-157 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr8g1830 Pkinase 5.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1830 - K13420 mtr:MTR_8g469650 1142.87