Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1829 ATGGTTAATCTATCATCTCATCTCTTTCTTTTATCGCTTTCATTGCATTGTTGTTTTATTGCTTGCTTAGCTGCAAATACAAAAAACATCACAACTGATCAATCTGCTCTTCTAGCATTCAAATCCCTAATTACTTCAGACCCTTATGATGTGTTGGCTAATAATTGGTCAACCTCCTCTTCTGTATGCAATTGGGTTGGTGTCACTTGTGATGAGCGACACGGTAGAGTCCACAGTTTGATTCTCCAAAACATGAGTCTTAGAGGTACCGTTTCCCCAAACTTGGGGAATCTGTCCTTTCTTGTTATACTTGACCTAAAAAATAATAGCTTCGGTGGTCAGTTTCCTAAAGAGTTATGTTCGTTGCGCCGATTAAAGGTTCTTCATATCAGCTACAACGAGTTTGAAGGGGGGATTCCTCCAGCATTGGGGAACTTATCACAACTTCAATATTTGTATCTCGGCGCTAACAATTTTAATGGTTTTATTCCCCAATCTATCGGTAACCTTCATGGGTTGATAGAATTGGATACCATACGGAACAAGTTGTCTGGACTCATACCTCGAACAATTTCTAACATGTCTTCCATTGAAGTTCTCCATTTATCTTTTAACTACTTTTCAGGTGAAATTCCATCGCTTAACAACATGACTTCTTTGAGGGTGGTAGATTTTGCCTTTAACAATTTAAATGGAAGACTACCAAATGATTTTTTCAATCAGCTTCCTCAACTCAGAAATTTTAGTTTAAACAACAATCAATTTGAAGGAAGCATTCCACAATCAATTGGTAACTGTACATCATTGATATACTTAGATTTATCATCAAACTTTCTCACAGGTGAAATTCCAAAAGGGATATTGGGTGATCTTACACAGCTAATATCATTGTCCCTTATGGATAACCAGCTTTCAGGTGAAATTCCATCGTTTAACAGCATGACTTCTTTGAGGGTGGTCAAATTTAGCTATAACAATTTGAATGGCAACTTACCAAATGATTTTTTCAATCAGCTACCTCAACTTGAAAACTGTAATTTACACAACAATCAATTTGAAGGAAGCATTCCACGATCAATTGGTAACTGCACATCATTGATATACATAAATTTAGCATCAAACTTTTTGACAGGTACGATTCCCGAGGAGATTGGCTATCTTGATAAACTTCAGCGACTATCATTTTCTAACAATAGCTTAAGTGGATCTATTCCTTCCAAAATCTTCAACATGTCATCACTCACTAATTTGGAGGTTGAACATAATAGCCTCTCAGGCACAATTCCATCAAATACGGGATATAGCCTTCCTAGCCTGCAACATCTACACTTGAATAATAACAATTTTGTTGGAAATATTCCAAATAACATATTCAACTCTTCTAATCTTATTCATTTTCAATTGCATGACAACGAATTCAGTGGAACTCTACCCAATATTGCTTTTGGAGATTTAGGATTGCTTGAATCGTTTCGCATATATAACAACAAATTGACAATAGAAGATTCTCATCAATTCTTTACTTCCTTGACAAATTGTAGATATTTGAAATATTTAGAGCTATCAGGGAATCATATATCTAATCTTCCTAAGTCAATTGGAAACATAACTTCAGAAAAGTTTGAAGTGGATTCGTGTGGAATTGATGGTAATATTCCCCAAGAAGTTGGAAACATGACCAACTTGCTACATTTTAATCTTCATGGGAATAATATAAGTGGACCAATACCTGGTACATTCAAAGGGTTGCAGAAACTTCAATATTTGAATCTTGGACACAATGGACTACAAGGATCATTTATTGAAGAGTTTTGTGAAATGAAGAGTTTGGGTGAGTTGGGTCTAGAAAATAATAAGCTTTCTGGTGTTTTGCCAACATGTTTGGGAAATATGAGTTCTATTATAAGGTTATACATAGGCTCTAACAGTCTGAACTCTAAGATACCTTCCTCTCTTTGGAGTGTCATAGATATCTTAGAGCTAGATTTGTCCTCTAATGCCTTCATTGGTAATCTTCCACCTGAGATTGGCAATTTGAGAGCAATTATACTATTAGACCTATCAAGAAATCAGATTTCAAGCAACATTCCAACAACCATCAGTTCCTTACAAACATTGCAGAATCTCTCCTTAGCACAAAATAAACTGATTGGATCAATTCCCAAATCACTTGGTCATATGGTAAGCTTGATCTCTTTGGACTTGTCCCAAAATATGTTAAAAGGTGTTATTCCAAAATCCTTAGAATCACTTGTGTATCTTCAAAACATCAACTTCTCATATAATAGATTACAAGGAGAGATTCCTGATGGTGGACATTTCAAAAACTTCATAGCTGAATCATTTATGCATAATGATGCACTTTGCGGTGATCCTCGCCTCCAAGTACCTCCATGTGGTAAGCAAGTTCAGAAATGGTCAAATGAAAAGAAGCTTATATTGAAATGCATACTTCCCATAGTTGTCTCAGCCATTTTGGTTGTTGCGTGCATCATACTATTAAAACATAATAAAAGGAGAAAGAATGAAAATAATGTTGAAAGGGGTTTGTCAACTTTGGGAGCTCCAAGAAGAATATCCTATTATGAAATTGTGCAAGCGACTAATGGATTCAATGACCGTAATTTCCTTGGAAGTGGGGGATTTGGCTCTGTTTATCAGGGGAAGCTTCTTGATGGTGAGATGATTGCCGTTAAAGTAATTGATTTGCAATCAGAGGCAAAATCAAAGAGCTTTGATGCAGAATGCAATGCCATGAGAAATCTACGACATCGAAATCTGGTTAAGATTATCAGCAGTTGTTCAAATCTTGATTTCAAATCATTGGTGATGGAGTTCATGTCAAATGGAAGTGTAGACAAATGGTTATATTCAAATAACTATTGTCTAAGTTTCTTGCAAAGGTTAAATATAATGATAGATGTTGCATCTGGATTGGAATATCTCCATCATGGTTCTTCAATACCTGTGGTTCACTGTGATCTAAAGCCTTCCAATGTCTTGTTGGATGAAAATATGGTTGCACATGTTAGTGATTTTGGTATTTCCAAGCTCATGGATGAAGGACAATCTAAAACTCATACACAAACTTTGGCTACTATTGGATATCTTGCACCAGAGTATGGATCAAAAGGAATTGTTTCTGTGAAAGGAGATGTATACAGCTATGGGATTATGCTAATGGAAATCTTTACAAGGAGAAAGCCAATAGATGATATGTTTGTTGCAGAACTAAGCTTGAAGACATGGATCAGTGGATCATTGCCTAATTCAATTATGGAGGTCATGGATTCAAATTTAGTCCAAAGAACTAGGGACCAAATTGATGATATATTGACTCACATGTCATCTATTTTTAGTTTAGCCCTGAATTGTTGTGAAGATTCACCTGAAGCAAGAATCAATATGGCAGATGTTATTGCGACGCTAATCAAAATCAAGACTTTGGTTGTTGTCGCAAACACAATCTAG 3471 0.3581 MVNLSSHLFLLSLSLHCCFIACLAANTKNITTDQSALLAFKSLITSDPYDVLANNWSTSSSVCNWVGVTCDERHGRVHSLILQNMSLRGTVSPNLGNLSFLVILDLKNNSFGGQFPKELCSLRRLKVLHISYNEFEGGIPPALGNLSQLQYLYLGANNFNGFIPQSIGNLHGLIELDTIRNKLSGLIPRTISNMSSIEVLHLSFNYFSGEIPSLNNMTSLRVVDFAFNNLNGRLPNDFFNQLPQLRNFSLNNNQFEGSIPQSIGNCTSLIYLDLSSNFLTGEIPKGILGDLTQLISLSLMDNQLSGEIPSFNSMTSLRVVKFSYNNLNGNLPNDFFNQLPQLENCNLHNNQFEGSIPRSIGNCTSLIYINLASNFLTGTIPEEIGYLDKLQRLSFSNNSLSGSIPSKIFNMSSLTNLEVEHNSLSGTIPSNTGYSLPSLQHLHLNNNNFVGNIPNNIFNSSNLIHFQLHDNEFSGTLPNIAFGDLGLLESFRIYNNKLTIEDSHQFFTSLTNCRYLKYLELSGNHISNLPKSIGNITSEKFEVDSCGIDGNIPQEVGNMTNLLHFNLHGNNISGPIPGTFKGLQKLQYLNLGHNGLQGSFIEEFCEMKSLGELGLENNKLSGVLPTCLGNMSSIIRLYIGSNSLNSKIPSSLWSVIDILELDLSSNAFIGNLPPEIGNLRAIILLDLSRNQISSNIPTTISSLQTLQNLSLAQNKLIGSIPKSLGHMVSLISLDLSQNMLKGVIPKSLESLVYLQNINFSYNRLQGEIPDGGHFKNFIAESFMHNDALCGDPRLQVPPCGKQVQKWSNEKKLILKCILPIVVSAILVVACIILLKHNKRRKNENNVERGLSTLGAPRRISYYEIVQATNGFNDRNFLGSGGFGSVYQGKLLDGEMIAVKVIDLQSEAKSKSFDAECNAMRNLRHRNLVKIISSCSNLDFKSLVMEFMSNGSVDKWLYSNNYCLSFLQRLNIMIDVASGLEYLHHGSSIPVVHCDLKPSNVLLDENMVAHVSDFGISKLMDEGQSKTHTQTLATIGYLAPEYGSKGIVSVKGDVYSYGIMLMEIFTRRKPIDDMFVAELSLKTWISGSLPNSIMEVMDSNLVQRTRDQIDDILTHMSSIFSLALNCCEDSPEARINMADVIATLIKIKTLVVVANTI* 1157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1829 1156 SMART LRR_sd22_2 583 606 - -
Mtr8g1829 1156 SMART LRR_sd22_2 703 722 - -
Mtr8g1829 1156 SMART LRR_sd22_2 387 413 - -
Mtr8g1829 1156 SMART LRR_sd22_2 510 538 - -
Mtr8g1829 1156 SMART LRR_sd22_2 727 748 - -
Mtr8g1829 1156 SMART LRR_sd22_2 146 172 - -
Mtr8g1829 1156 Pfam Protein kinase domain 873 1140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1829 1156 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 145 288 - -
Mtr8g1829 1156 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 370 1149 - -
Mtr8g1829 1156 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 13 147 - -
Mtr8g1829 1156 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 288 381 - -
Mtr8g1829 1156 SUPERFAMILY RNI-like 289 535 - -
Mtr8g1829 1156 Pfam Leucine rich repeat 705 764 IPR001611 GO:0005515
Mtr8g1829 1156 Pfam Leucine rich repeat 557 596 IPR001611 GO:0005515
Mtr8g1829 1156 Pfam Leucine rich repeat 148 206 IPR001611 GO:0005515
Mtr8g1829 1156 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Mtr8g1829 1156 SUPERFAMILY L domain-like 543 792 - -
Mtr8g1829 1156 Pfam Leucine Rich Repeat 124 146 IPR001611 GO:0005515
Mtr8g1829 1156 ProSitePatterns Serine/Threonine protein kinases active-site signature. 990 1002 IPR008271 GO:0004672|GO:0006468
Mtr8g1829 1156 ProSiteProfiles Leucine-rich repeat profile. 515 536 IPR001611 GO:0005515
Mtr8g1829 1156 Gene3D Phosphorylase Kinase; domain 1 854 946 - -
Mtr8g1829 1156 Gene3D Ribonuclease Inhibitor 504 807 IPR032675 -
Mtr8g1829 1156 Gene3D Ribonuclease Inhibitor 288 503 IPR032675 -
Mtr8g1829 1156 SUPERFAMILY Protein kinase-like (PK-like) 850 1143 IPR011009 -
Mtr8g1829 1156 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 288 381 - -
Mtr8g1829 1156 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 370 1149 - -
Mtr8g1829 1156 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 13 147 - -
Mtr8g1829 1156 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 145 288 - -
Mtr8g1829 1156 Gene3D Ribonuclease Inhibitor 32 141 IPR032675 -
Mtr8g1829 1156 Gene3D Ribonuclease Inhibitor 238 287 IPR032675 -
Mtr8g1829 1156 SMART LRR_typ_2 436 460 IPR003591 -
Mtr8g1829 1156 SMART LRR_typ_2 727 750 IPR003591 -
Mtr8g1829 1156 SMART LRR_typ_2 559 582 IPR003591 -
Mtr8g1829 1156 SMART LRR_typ_2 146 169 IPR003591 -
Mtr8g1829 1156 SMART LRR_typ_2 217 241 IPR003591 -
Mtr8g1829 1156 SMART LRR_typ_2 170 193 IPR003591 -
Mtr8g1829 1156 SMART LRR_typ_2 387 411 IPR003591 -
Mtr8g1829 1156 SMART LRR_typ_2 339 363 IPR003591 -
Mtr8g1829 1156 SMART LRR_typ_2 607 630 IPR003591 -
Mtr8g1829 1156 SMART LRR_typ_2 98 122 IPR003591 -
Mtr8g1829 1156 SMART LRR_typ_2 510 536 IPR003591 -
Mtr8g1829 1156 SMART LRR_typ_2 679 703 IPR003591 -
Mtr8g1829 1156 SMART LRR_typ_2 314 338 IPR003591 -
Mtr8g1829 1156 SMART LRR_typ_2 267 290 IPR003591 -
Mtr8g1829 1156 SMART LRR_typ_2 242 266 IPR003591 -
Mtr8g1829 1156 Gene3D Transferase(Phosphotransferase) domain 1 947 1153 - -
Mtr8g1829 1156 Gene3D Ribonuclease Inhibitor 142 237 IPR032675 -
Mtr8g1829 1156 SUPERFAMILY L domain-like 32 329 - -
Mtr8g1829 1156 ProSiteProfiles Protein kinase domain profile. 871 1150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1829 1156 ProSitePatterns Protein kinases ATP-binding region signature. 877 899 IPR017441 GO:0005524
Mtr8g1829 1156 SMART serkin_6 871 1150 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1829 Mtr-Chr8 27496024 27525111 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1829 4 1147 Receptor kinase-like Gene Family AT5G46330 34.099 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr8g1829 Pkinase 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1829 - K13420 mtr:MTR_8g465340 1477.23