Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1812 ATGGCTGAAATGCAAGACTATATCCAACTTTCATTCGTTATGCTACTCTCCATAATTGCTATTCGAACCATACTAACAAGAAAGAAGAACAATAATCATCTTACTCCACCCACCCCTCCTTCCCTACCTATCATTGGACATTGTCACCTTATATCTAAGTTTCCCCACAAAAGTTTTCATAAGCTTTCAATTCAATATGGACCCATAATTCAACTTTTCCTAGGCTCTATACCTTGTATAGTAACTTCAAATCCAGAAATAGCCAAAGAGTTTCTTAAAACTCACGAAACTTCCTTCTCAAACCGCTTAAAAAATGCTGCAACTACCTACATATCATATGGATTAAAAGGTTTCATAATTACGCCTTACGGTGATTATTGGCAGTTCGTGAAGAAGATATGCATGTCAGAGCTTCTTGGTGTAATAACGCTTGATCAACTCCGTCCCTTGAGGCAACAAGAGACTCTAAGGTTTCTTAGACTTTTGCAGAAGAAAGGGGAAACCGGTGAAGCCATTGAAGTTGGGGGCGAGCTATTGACTCTCACCAATAGCATTATAACAATAATGACAATGAAAAAAACTTTCGGTTCTGAGAATGATATTAGCGATGTTAAAGAGATTAGGAAGATGGTGACAGAGACCGCAGAGCTTGTAGGGAAGGTGAATGTGTCGGATTTTATCTGGTTTTTTAAGAATATAGATTTTTATGGAATGAATAAAAAGCTGAAAAGGATTCGGGATAGGTTTGACACAATGATGGATAGGGTGACAAAGGAGCATCAAGAGGAAAAGAAGAAAAGAGGTGAAGGTGCTCATCATGTTAGGGATTTACTTGATATTTTGTTGGAAATACAAGAGGATGAGAGCAATGAAATCAAATTGACTAGTGAGAATGTCAACGCGTTCATCTTGGACATATTTATGGCTGGAACTGACACAGCTGCTATAACAATTGAATGGGCTCTAGCTGAGTTAATAAACAATCCACATGTGATGGAGAAAGCAAGACAAGAGATTGATTCAGTAACTGGAAAGAGTAGATTAATACAAGAATCCGATATTCCCAACCTTCCATACATGCGAGCTATAATCAAAGAAACACTAAGAATTCACCCTACAGTACCAGTTATAGTGAGAGAATCATCGGAAAGTTGCAAAGTTTATGGTTATGAGATCGCAGCAAAGACCGTTTTATTTGTTAACTTATGGTCAATGGGTAGAGACCCCAAATTGTGGGAAAACCCACTTGAGTTCAGGCCAGAGAGGTTTATGTGTGAAGAAAATAACAAGTTCGATATGAGGGGGCAAAATTTCCAACTTATGCCATTTGGAACTGGTAGAAGGGCTTGCCCTGGTTACTTATTAGCACTTCAAGTTGTTCCCACAAATCTTGCTGCAATGATTCAGTGTTTTGAATGGAATGTTGATGGTAATGGGAAAGTTGACATGGAAGAGAAACCGGCCGTGACCCTTCCAAGGGCTCATCCTTTGATTTGTGTTCCTGTGCCGCGTTTTAATAGCATTCCTTCGTGTGAATGA 1539 0.3899 MAEMQDYIQLSFVMLLSIIAIRTILTRKKNNNHLTPPTPPSLPIIGHCHLISKFPHKSFHKLSIQYGPIIQLFLGSIPCIVTSNPEIAKEFLKTHETSFSNRLKNAATTYISYGLKGFIITPYGDYWQFVKKICMSELLGVITLDQLRPLRQQETLRFLRLLQKKGETGEAIEVGGELLTLTNSIITIMTMKKTFGSENDISDVKEIRKMVTETAELVGKVNVSDFIWFFKNIDFYGMNKKLKRIRDRFDTMMDRVTKEHQEEKKKRGEGAHHVRDLLDILLEIQEDESNEIKLTSENVNAFILDIFMAGTDTAAITIEWALAELINNPHVMEKARQEIDSVTGKSRLIQESDIPNLPYMRAIIKETLRIHPTVPVIVRESSESCKVYGYEIAAKTVLFVNLWSMGRDPKLWENPLEFRPERFMCEENNKFDMRGQNFQLMPFGTGRRACPGYLLALQVVPTNLAAMIQCFEWNVDGNGKVDMEEKPAVTLPRAHPLICVPVPRFNSIPSCE* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1812 512 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g1812 512 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g1812 512 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g1812 512 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g1812 512 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g1812 512 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g1812 512 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g1812 512 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g1812 512 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 3 510 - -
Mtr8g1812 512 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g1812 512 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g1812 512 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g1812 512 SUPERFAMILY Cytochrome P450 36 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g1812 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Mtr8g1812 512 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 510 - -
Mtr8g1812 512 Pfam Cytochrome P450 36 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g1812 512 Gene3D Cytochrome P450 20 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1812 Mtr-Chr8 27224196 27226015 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1812 1 504 Cytochrome P450 AT5G06900 45.238 5.06e-161 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1812 K24188 - mtr:MTR_8g468780 788.489