Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1809 ATGAAAATGGGATTAGGTGGTGATAATGGTAAGGTGATTGAGTCTTTGGATGTGTGTAAATCAAAAGGGTGGAAGAAGAAGAAGAAACAAGATGGGGTTATGGAAGATGAAGAAACTGAAACTGGGTGTTGGCTTAGTTTTAGGTTTATTGGAAGCTGCATTTCTTCAAGATCCAAGGTTGATAGCTCTGTTAGTGGCACCAGTACTAATTATGCTGAAAGCAAATCCACCATTGATACAAGTAGAGACCAACCATCGGTTCCAGTTGTCTCTTCAACAACCACTACCACTAGTAATGCTGAAAGCAACTCATCTACTTCAAAAGTTGAAGACGAAATTAAAGTTGCTTCCAGGCTGCGGAAATTCTCTTTCAATGATCTTAAGTTGGCAACAAGAAATTTTCGGCCCGAGAGTCTTCTCGGTGAAGGTGGATTTGGTTGTGTGTTCAAAGGATGGATTGAAGAAAATGGAACTGCACCAGTGAAACCTGGCACAGGACTTACTGTTGCAGTCAAAACCCTTAACCATGATGGCCTCCAGGGTCATAAAGAATGGCTGGCTGAAGTTAATTATCTTGGTGATTTAGTTCATCAAAACCTTGTCAAACTTATAGGCTACTGTATCGAAGATGATCAAAGGTTGCTAGTATATGAATTTATGCCTCGGGGAAGCTTGGAAAACCACTTGTTTAGGAGATCCTTGCCTCTTCCATGGTCCATTAGGATGAAAATTGCGCTCGGAGCTGCAAAGGGACTTGCTTTTCTTCACGAGGAAGCCGAACGACCTGTAATATATAGGGATTTCAAAACTTCCAATATATTATTAGATGCAGAGTACAATGCCAAGCTCTCAGACTTTGGACTTGCAAAGGATGGTCCAGAGGGTGATAAAACCCATGTGTCTACTCGAGTTATGGGAACTTATGGTTATGCAGCTCCAGAATATGTCATGACAGGGCATCTTACATCAAGAAGTGATGTGTATAGTTTCGGAGTGGTACTACTTGAGATGATAACCGGGCGAAGATCCATGGACAAAAACCGACCGAATGGCGAACATAACCTCGTGGAATGGGCTAGACCGCATCTAGGAGAGAGAAGAAGGTTCTACAGGTTAATAGACCCTCGGCTGGAAGGCCACTTCTCGATAAAAGGAGCTCAAAAAGCCGCCCATCTGGCTGCCCACTGCCTTAGCCGAGATCCAAAAGCTAGACCACTAATGAGTGAAGTTGTAGAAGCTTTGAAGCCTCTCCCAAACCTTAAGGACATGGCTAGTTCATCATACTATTTCCAGACAATGCAAGCTGACCGTTTTAGTGCAAGTCCAAATACTCGAAACGGTAGAACACAAGGGGCATTCACGCGCAATGGACAACAACAAAGAAGTCTTTCCATATCACATGGTACTCATGCTTCTCCGTTTCATCATCAGTATCCTCAAAATTCACCAAAACCAACAGGAAAGGCACAGAGTTGA 1476 0.4309 MKMGLGGDNGKVIESLDVCKSKGWKKKKKQDGVMEDEETETGCWLSFRFIGSCISSRSKVDSSVSGTSTNYAESKSTIDTSRDQPSVPVVSSTTTTTSNAESNSSTSKVEDEIKVASRLRKFSFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNYLGDLVHQNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMITGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAHLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQADRFSASPNTRNGRTQGAFTRNGQQQRSLSISHGTHASPFHHQYPQNSPKPTGKAQS* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1809 491 Pfam Protein tyrosine and serine/threonine kinase 138 414 IPR001245 GO:0004672|GO:0006468
Mtr8g1809 491 Gene3D Phosphorylase Kinase; domain 1 108 219 - -
Mtr8g1809 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Mtr8g1809 491 CDD STKc_IRAK 140 417 - -
Mtr8g1809 491 MobiDBLite consensus disorder prediction 439 491 - -
Mtr8g1809 491 ProSitePatterns Protein kinases ATP-binding region signature. 140 172 IPR017441 GO:0005524
Mtr8g1809 491 Gene3D Transferase(Phosphotransferase) domain 1 220 436 - -
Mtr8g1809 491 SUPERFAMILY Protein kinase-like (PK-like) 120 437 IPR011009 -
Mtr8g1809 491 MobiDBLite consensus disorder prediction 58 106 - -
Mtr8g1809 491 PANTHER OS01G0588500 PROTEIN-RELATED 71 479 - -
Mtr8g1809 491 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 71 479 - -
Mtr8g1809 491 ProSiteProfiles Protein kinase domain profile. 134 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1809 491 MobiDBLite consensus disorder prediction 58 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1809 Mtr-Chr8 27191805 27195942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1809 79 414 Glycoside Hydrolase AT3G07070 54.277 5.59e-119 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mtr8g1809 PK_Tyr_Ser-Thr 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1809 - - gmx:100807510 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1809 8 27191805 27195942 Mtr8g1809 8 27191805 27195942 ECH