Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1797 ATGGAGGAGGTTTCCAATGTGAAATCTGAACTAAGTCCAAGAAGTCATAGATTGCTCATGCTGGATACTGATTCTGTTGTAACTACTAAATCTGTTAAAAGGCGGCGAAGAGAATCATCGGTATTAGGTGGCAATGAACAACAAGGCGATGTATCAGAAATACAGCAGCCAGTGAGTGGTCAATCCACTGCAACCACTGTGAAGAGAAGTTCAAGGTTTAGGGGTGTTAGCAGGCATAGGTGGACTGGAAGGTATGAAGCTCATTTATGGGATAAAGGGACATGGAATCCTACTCAAAAGAAAAAGGGAAAGCAAGTATATTTGGGTGCTTATAACGATGAAGAAGCTGCCGCTAGAGCTTATGATTTGGCTGCACTCAAATACTGGGGAACATCGACGTTTACAAATTTCCCTGTACCTGACTACGAGAAAGAAATTGAGATTATGATAAATATGACTAAAGAAGAGTATCTTGCTTCATTGAGAAGGAGGAGTAGTGGATTTTCTAGAGGTGTATCAAAATATAGAGGAGTAGCAAGGCACCATCACAATGGAAGATGGGAAGCAAGGATTGGAAGAGTGTTCGGCAACAAGTACCTCTACCTCGGGACTTATGGTACACAAGAAGAGGCGGCTCGTGCATACGATATCGCAGCAATTGAATACCGAGGCATAAACGCAGTTACAAACTTTGACTTGAGCACCTACATAAGATGGTTAAGGCCAGGACCTAATCCTACAACTTCTCAAGAACAAAAATCAAACACCGAACCTCAACCCTTCGCCGCCACTAATTTTATTCAAACAAGAGGAAACATGGATGCATCAAACTCCACAATCAATCCAAAAAAGCTCTTGCAAGTTGAAAATACAAAGCAGAAAGAGTCTTTCAACTCTTTGATGACCCCTTTAAGTCCTTGCAGCAAACCAGATTCACCAACAGCATTAGGACTTCTACTAAAATCCTCGATGTTTAGAGAACTAATGCAGAGAAATCTAAATTCATCTAATGAAGACGAAGAAATTGAATTGAAATACCCTCAAGAAGGGATTGCAGGGGTTTTTGACATTGACAACAACAGTAACACTTACTTGTGCTCTTCTAATATAAGCAGATTACCTAACTTGGTATCATCGGAAGAGAGGCCGTTGCCTATGTATCATGGAACTATGCAATCCCTATGGAATGGCCCTTCCAACATTTCTAACTGA 1212 0.4101 MEEVSNVKSELSPRSHRLLMLDTDSVVTTKSVKRRRRESSVLGGNEQQGDVSEIQQPVSGQSTATTVKRSSRFRGVSRHRWTGRYEAHLWDKGTWNPTQKKKGKQVYLGAYNDEEAAARAYDLAALKYWGTSTFTNFPVPDYEKEIEIMINMTKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYGTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLRPGPNPTTSQEQKSNTEPQPFAATNFIQTRGNMDASNSTINPKKLLQVENTKQKESFNSLMTPLSPCSKPDSPTALGLLLKSSMFRELMQRNLNSSNEDEEIELKYPQEGIAGVFDIDNNSNTYLCSSNISRLPNLVSSEERPLPMYHGTMQSLWNGPSNISN* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1797 403 Gene3D AP2/ERF domain 71 139 IPR036955 GO:0003700|GO:0006355
Mtr8g1797 403 Gene3D AP2/ERF domain 173 234 IPR036955 GO:0003700|GO:0006355
Mtr8g1797 403 ProSiteProfiles AP2/ERF domain profile. 72 138 IPR001471 GO:0003700|GO:0006355
Mtr8g1797 403 MobiDBLite consensus disorder prediction 29 71 - -
Mtr8g1797 403 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 397 - -
Mtr8g1797 403 Pfam AP2 domain 173 224 IPR001471 GO:0003700|GO:0006355
Mtr8g1797 403 Pfam AP2 domain 71 130 IPR001471 GO:0003700|GO:0006355
Mtr8g1797 403 CDD AP2 173 234 IPR001471 GO:0003700|GO:0006355
Mtr8g1797 403 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Mtr8g1797 403 PRINTS Ethylene responsive element binding protein signature 214 234 IPR001471 GO:0003700|GO:0006355
Mtr8g1797 403 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 397 - -
Mtr8g1797 403 ProSiteProfiles AP2/ERF domain profile. 174 232 IPR001471 GO:0003700|GO:0006355
Mtr8g1797 403 SUPERFAMILY DNA-binding domain 71 139 IPR016177 GO:0003677
Mtr8g1797 403 MobiDBLite consensus disorder prediction 42 71 - -
Mtr8g1797 403 SMART rav1_2 72 144 IPR001471 GO:0003700|GO:0006355
Mtr8g1797 403 SMART rav1_2 174 238 IPR001471 GO:0003700|GO:0006355
Mtr8g1797 403 SUPERFAMILY DNA-binding domain 173 234 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1797 Mtr-Chr8 27042856 27045286 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1797 68 254 AP2-EREBP Transcription Factor Family AT5G57390 62.121 2.03e-84 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mtr8g1797 AP2 7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1797 - - gmx:100798483 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1797 8 27042856 27045286 Mtr8g1797 8 27042856 27045286 ECH