Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1789 ATGCCTGAGGAGATTGGCTATCTTGATAAACTTGAGCAGCTACTATTGGCAAACAATAGCTTTACTGGATCTATACCTTCCAAAATCTTCAACATGTCATCACTGATAGGCTTGTATCTTGAACAAAATCACCTCTCCGGGATAATTCCATCAAATACGGGATATAACCTTCCTAGCTTGCAGTATCTACAATTGGATCATAACAATTTTGTTGGAAATATTCCAAATAGTATATTCAACTCTTCTAATCTTATTGTATTTCAATTGAGTGACAATGCATTCAGTGGAACTCTACCCAATATTGCTTTTGGAGATTTAAGGCTCCTCAAATCATTTTACACATATGGCAACAATTTGACAATAGAAGATTCTCATCAATTCTTTACTTCCTTGACGAATTGTAGATATTTGAAATATCTTGACTTATCAGGGAATCATGTACTACCCAATCTTCCAAAGTCAATTGGAAACATAACTTCAGAATACATCAGGGCAAAATCATGTGGAATTGGTGGTTATATTCCCCTAGAAGTTGGAAACATGACCAACTTGCTATATTTTAATCTGTATGGCTGTTTCAAAGGGCTAGAGAAGCTTCAAGTATTGTCTCTTGCTTACAATGCACTCAAAGGATCATTCATTGATGAGCTCTGTCTAATTAAGAGTTTAGGTGAGTTGTATCTAGAAAATAATAAGCTTTCTGGTGTTTTACCAACATGTTCGGGAAATATGACTTCTCTTAGAAAATTGAACGTAGGATCTAACAATTTGAACTCTAAGATACCTTCATCTCTTTGGGGTCTCACTGATATATTAATGTTAGATTTGTCCTCCAATGCTTTTATTGGTGATTTTCCACCCGATATTGGGAATTTGAGAGAACTTGTAATATTAGATCTATCAAGAAATCAAATTTCAAGCAACATTCCTACAACCATCAGTTCCTTACAAAATTTGCAGAATCTCTCCTTGGCTCATAATAAATTGAATGGGCCAATTCCCACATCACTTGGTAAAATGATAAGCTTAATCTCCTTGGACTTGTCCCAAAATATGCTAACAGGTGCTGTTCCCAAATCCTTAGAATCACTTGTGTATCTTCAAAACATCAACTTCTCATATAATAGATTACAAGGAGAGATTCCTGATGGTGGACCTTTCAAGAACTGCACAGCTATATCTTTTATGCATAGTGGACCACTTTGTGGAAATCTTCGCCTACAAGTACCACCTTGTGGCAAAAACAGAATACTTAAAAGGAAAAGAATTAAAATTACTCTTGAAAGGGGTTTATCAGCTTTAGGAGCTCTAAGAAGAATATCATATTATGAACTTTTGCAAGCAACAAATGGATTCAATGAGAGAAAATTACTTGGAAGGGGGAGCTTTGGCTCTGTGTATCAAGGGGAGCTTCCTGATGGTGAGATTATTGCAGTCAAAGTATTTGATTTGCAATCAGAGGCAAAATCAAAGAGCTTTGATGCAGAATGCAATGCAATGAGAAATCTACGACATCGAAATCTGGTAAAGATTATCAGTAGTTGCTCAAATCTTGATTTCAAATCATTGGTGATGGAGTTCATGTCAAATGGAAGTGTAGACAGTTGGTTATATTCAAATAACTATTGTCTAAGTTTCTTGCAAAGGTTAAATATAATGATAGATGCTGCATCTTCAATACCAGTGGTTCATTGTGATCTAAAGCCTTCCAATGTCTTGTTGGATGAAAATATGGTTGCACATGTTAGCGATTTTGGTATTGCAAAGCTCATGGATGAAGGACAATCTGAAACTCATACACAAACTTTGGCTACTATTGGATACCTTGCACCAAAGTATGGATCTAAAGGAATTGTTTCTGTCAAAGGAGATGTGTACAGCTATGGGATTATGCTAATGGAAATCTTCACAAGAAAAAGGCCAACAGATGATATGTTTGTTGCAGAACTAAGCTTGAAGACATGGATCAGTGGATCATTGCCTAATTCAATTATGGAGGTCATGGATTCAAATTTAGTCCAAATAACTGGGGACCAAATTGATGATATATCGACTCACATGTCATCTATTTTTAGTTTAGCCCTGAGTTGTTGTGAAGATTCACCTGAAGCAAGAATCAATACGGCAGATGTTATTGCGTCGCTAATCAAAATCAAGGCTTTGGTTCTTGGCGCAAACAGGGTCTAG 2187 0.3612 MPEEIGYLDKLEQLLLANNSFTGSIPSKIFNMSSLIGLYLEQNHLSGIIPSNTGYNLPSLQYLQLDHNNFVGNIPNSIFNSSNLIVFQLSDNAFSGTLPNIAFGDLRLLKSFYTYGNNLTIEDSHQFFTSLTNCRYLKYLDLSGNHVLPNLPKSIGNITSEYIRAKSCGIGGYIPLEVGNMTNLLYFNLYGCFKGLEKLQVLSLAYNALKGSFIDELCLIKSLGELYLENNKLSGVLPTCSGNMTSLRKLNVGSNNLNSKIPSSLWGLTDILMLDLSSNAFIGDFPPDIGNLRELVILDLSRNQISSNIPTTISSLQNLQNLSLAHNKLNGPIPTSLGKMISLISLDLSQNMLTGAVPKSLESLVYLQNINFSYNRLQGEIPDGGPFKNCTAISFMHSGPLCGNLRLQVPPCGKNRILKRKRIKITLERGLSALGALRRISYYELLQATNGFNERKLLGRGSFGSVYQGELPDGEIIAVKVFDLQSEAKSKSFDAECNAMRNLRHRNLVKIISSCSNLDFKSLVMEFMSNGSVDSWLYSNNYCLSFLQRLNIMIDAASSIPVVHCDLKPSNVLLDENMVAHVSDFGIAKLMDEGQSETHTQTLATIGYLAPKYGSKGIVSVKGDVYSYGIMLMEIFTRKRPTDDMFVAELSLKTWISGSLPNSIMEVMDSNLVQITGDQIDDISTHMSSIFSLALSCCEDSPEARINTADVIASLIKIKALVLGANRV* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1789 728 SUPERFAMILY L domain-like 166 402 - -
Mtr8g1789 728 SMART LRR_typ_2 8 32 IPR003591 -
Mtr8g1789 728 SMART LRR_typ_2 292 316 IPR003591 -
Mtr8g1789 728 SMART LRR_typ_2 220 243 IPR003591 -
Mtr8g1789 728 SMART LRR_typ_2 57 81 IPR003591 -
Mtr8g1789 728 SMART LRR_typ_2 244 268 IPR003591 -
Mtr8g1789 728 SMART LRR_typ_2 340 363 IPR003591 -
Mtr8g1789 728 Pfam Leucine rich repeat 222 280 IPR001611 GO:0005515
Mtr8g1789 728 Pfam Leucine rich repeat 10 70 IPR001611 GO:0005515
Mtr8g1789 728 Gene3D Transferase(Phosphotransferase) domain 1 528 722 - -
Mtr8g1789 728 ProSiteProfiles Protein kinase domain profile. 452 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1789 728 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 1 426 - -
Mtr8g1789 728 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 434 721 - -
Mtr8g1789 728 SMART serkin_6 452 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1789 728 Gene3D Ribonuclease Inhibitor 126 419 IPR032675 -
Mtr8g1789 728 Pfam Protein kinase domain 453 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1789 728 Gene3D Ribonuclease Inhibitor 1 125 IPR032675 -
Mtr8g1789 728 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 434 721 - -
Mtr8g1789 728 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 426 - -
Mtr8g1789 728 ProSitePatterns Serine/Threonine protein kinases active-site signature. 562 574 IPR008271 GO:0004672|GO:0006468
Mtr8g1789 728 Gene3D Phosphorylase Kinase; domain 1 434 527 - -
Mtr8g1789 728 SUPERFAMILY RNI-like 2 211 - -
Mtr8g1789 728 SUPERFAMILY Protein kinase-like (PK-like) 435 715 IPR011009 -
Mtr8g1789 728 ProSitePatterns Protein kinases ATP-binding region signature. 458 480 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1789 Mtr-Chr8 26927628 26930867 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1789 1 728 Receptor kinase-like Gene Family AT3G47570 34.483 7.26e-145 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr8g1789 Pkinase 6.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1789 - - mtr:MTR_8g468620 1190.25