Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1751 ATGGAAGAGAGAAATGGTTGTGAGAAACTTGAAGAGGTTATGCTTCCAGGGTTTAGGTTTCATCCAACTGATGAAGAACTTGTTGGATTTTACCTAAAGAAAAAGATTCAACAACGCCCTCTTGCTATTGAACTCATCAAGCAGCTTGATATTTATAAATTTGATCCATGGGATCTACCAAAGTTGGCAAGTACAGGAGAGAAAGAGTGGTATTTTTACTGTCCAAGAGACAGAAAGTACAGAAACAGTGCAAGACCTAATAGGGTAACAAGAGCTGGGTTTTGGAAAGCAACAGGAACAGACAGACCTATTTATTCCTCAGAGGGTTCTAAGTGTATTGGCTTGAAAAAATCCTTAGTTTTCTACAAAGGTAGAGCTGCCAAAGGAGTCAAAACTGATTGGATGATGCATGAGTTTAGACTACCTTCTCTCATAGATTCATCATCTTCTCCAAAGAAATATGTAGACAAGACCATTCCGGCCAATGAATCTTGGGCAATATGCAGAATATTCAAGAAAACCAATGCAACAGCTCAAAGAGCTCTCTCTCACACATGGGTCCCTCCTTTACTTGAAACATCAACCTCCAATGTTCTAACAACAAATGATGGAAACCATAACCAATTTTGTTCATCAAACATGATCTTAACAAAGAAACCTAGCTTTGCAAGTCACTCTAGTACTTCTACTAATAACCTAACACAAAACTTAACCTCTTCTAGTAGTACTACACTTTGTCCCTTAGATGTTCCATCTTATAATAATCCAATTATTGATCCATTGATTTACAAACCCTTATACCGTTTACCAATTTCAAATGATCAAGATCTTAACCTAAGCACTGGCTTAGTATTTTCATCTCCTCTTGAAACATCTTGTAACAAAACTTCAATGGATTTTTCTTCCTTGCTATTAGGTATGTCATCTGAAGTAACAACTTCAAACTACATTGGTAATTTACAAGACCATTACAATAATGGGTATCCATTATTGGCTAACATTCCGAATATGAACGTGCCTCGTGTTGATGATCAACAAGAGATGGATACGGTTCGACCCATTGGATTTCCATTCAGTGTGCCTCTCAATATTGGTGATGCTTGGAAGTCATCAAGTCTTGTTTGGGATACTTCCTCTTGTACTTCTGATGAACCCTCTAGTTATTCTACTACCAAGTGTTATACTTAG 1188 0.3729 MEERNGCEKLEEVMLPGFRFHPTDEELVGFYLKKKIQQRPLAIELIKQLDIYKFDPWDLPKLASTGEKEWYFYCPRDRKYRNSARPNRVTRAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLIDSSSSPKKYVDKTIPANESWAICRIFKKTNATAQRALSHTWVPPLLETSTSNVLTTNDGNHNQFCSSNMILTKKPSFASHSSTSTNNLTQNLTSSSSTTLCPLDVPSYNNPIIDPLIYKPLYRLPISNDQDLNLSTGLVFSSPLETSCNKTSMDFSSLLLGMSSEVTTSNYIGNLQDHYNNGYPLLANIPNMNVPRVDDQQEMDTVRPIGFPFSVPLNIGDAWKSSSLVWDTSSCTSDEPSSYSTTKCYT* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1751 395 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 393 - -
Mtr8g1751 395 Gene3D NAC domain 23 178 IPR036093 GO:0003677|GO:0006355
Mtr8g1751 395 SUPERFAMILY NAC domain 12 173 IPR036093 GO:0003677|GO:0006355
Mtr8g1751 395 PANTHER PROTEIN FEZ ISOFORM X1 1 393 - -
Mtr8g1751 395 Pfam No apical meristem (NAM) protein 16 141 IPR003441 GO:0003677|GO:0006355
Mtr8g1751 395 ProSiteProfiles NAC domain profile. 14 173 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1751 Mtr-Chr8 26306199 26309054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1751 1 261 NAC Transcription Factor Family AT1G26870 61.940 1.14e-110 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr8g1751 NAM 7.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1751 - - vun:114179488 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1751 8 26306199 26309054 Mtr8g1751 8 26306199 26309054 ECH