Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1742 ATGGAGACTGAAAGACAGCTCCAAGTTTCTTCAAATTCTAGGCAGCACAATGGAGGAACTTCTTTCTTCAAAACTTGTTTCAATGGACTCAACGCCTTGGCAGGTATTGGGATACTCTCAATGCCATATGCAGTTTCACAAGGAGGGTGGCTGAGTTTCATGTTACTAATTATATTTGCCATGATATGTTGGTACACAGCTTTACTTCTAGAAAGGTGTATGAATCAACAACCATTAATCAAATCCTATCCTGATATAGGTGAGGTTGCTTTTGGATATAAGGGAAGAGTTGTAATAGCAAGTTTCATATATGTAGAACTTTTTTTAATTGCTGTGGTGCTTCTTATATTAGAAGGTGACAATTTAGAAAAGTTATTTCCAAATATGAACTTCACAATTATTGGACTTAATATTGGAAGTAAAAGTAGTTTTGTGTTAATCACTGCATTGATAATATTACCTACAACTTGGTTGAGAAGTTTAGGAGCTTTGGCCTACATATCTGTTGGTGGGGTAGTGACTTCTGTTGTTTTGATTGGTTGTGTTGTTTGGGTGGGAGAAGTTGATGGTGTAGGGTTTCATGAAAGAGGAAAGTTAGTTAATTTGGAAGGATTGACAACTGCTATGAGCCTTTTTGCTTTCTGTTATTGTGCTCATGCACTGATGCCCACAATATGCAATTCCATGAATGACAGAAAGCAGTTTTCTAAGGTTTTGCTGGTTTGCTTTATGGCAAGCACAATTATCTATGGAACCGTAGCTGTATTAGGCTACAGCATGTTTGGGGATCATTTGAAGTCTCAAATCACATTAAATCTACCAACAAATACAATAAGTACAAAATTAGCAATATATACCACAGTAATAAATCCTTTCACTAAGTATGCTATTATAATCACTCCAATAATCAATGCCATTGAAGAAAAATGGCATCTATGCAAGAGAAGACCTATTAGCATTCTCATTAGAACAGCCATTGTGGTAAGCAGTGTCTTTGTGGCACTATTTGTTCCATTTTTTGGATACATTATGGCTTTTATTGGTGCTTTTTTGAGTGTGGCAATGTCATGGTTGTTTCCTTGCCTCTGCTACTTAAAGATGAATAAAGCTGCTAGGCGATTTGGGTTAGAATTGATCATAATCATAGCAATTCTGCTCATTGGTACATTTATTGGAATGCATGGCACCTACATTTCACTTATGCAAATAATAAATAGTGTAAAGTCATGA 1230 0.3593 METERQLQVSSNSRQHNGGTSFFKTCFNGLNALAGIGILSMPYAVSQGGWLSFMLLIIFAMICWYTALLLERCMNQQPLIKSYPDIGEVAFGYKGRVVIASFIYVELFLIAVVLLILEGDNLEKLFPNMNFTIIGLNIGSKSSFVLITALIILPTTWLRSLGALAYISVGGVVTSVVLIGCVVWVGEVDGVGFHERGKLVNLEGLTTAMSLFAFCYCAHALMPTICNSMNDRKQFSKVLLVCFMASTIIYGTVAVLGYSMFGDHLKSQITLNLPTNTISTKLAIYTTVINPFTKYAIIITPIINAIEEKWHLCKRRPISILIRTAIVVSSVFVALFVPFFGYIMAFIGAFLSVAMSWLFPCLCYLKMNKAARRFGLELIIIIAILLIGTFIGMHGTYISLMQIINSVKS* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1742 409 Pfam Transmembrane amino acid transporter protein 19 394 IPR013057 -
Mtr8g1742 409 PANTHER OS06G0228500 PROTEIN 16 405 - -
Mtr8g1742 409 PANTHER OS05G0424000 PROTEIN-RELATED 16 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1742 Mtr-Chr8 26067391 26117048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1742 2 407 Amino Acid or Auxin Permease AAAP Family AT3G28960 47.922 2.20e-139 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1742 K15015 - gmx:100812006 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1742 8 26067391 26117048 Mtr8g1742 8 26067391 26117048 ECH