Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1738 ATGGCAGAAGAACAATTTCAAGCAAGTGGAAATTGGTGGGAGACACCAGCTAGAAACATGAGGTTTGAAAGTGTAGAACAACAACAACAACAATCTTCTTCCTTTGGAGGTTGGCAGCAGCAACAACAACATCATGATACTATGTCTGCTTCCGGTAGTTCCTCCGTGGTTTTTCATGATACTACTCAAAAGCTTCAACCTTCAGATTCTTCAACTTCAAACAATGACTCCAACTTGCATATGATGGGTTTAGGACTTTCTTCTCAAAACATTGATTGGAATCAAGCATCTATACTAAATGAGAAGGCTTCAGAAGGTAGTTTCAGGTCTATGCTTCAAGAGAATTTGAACTCCACAGGCACAAATTTTGAGCAAGAAACTAGTGGAATTGGAATTGGAGTTGAACTATCTCATCAAGTTAATTGGAGACAAGAAAAGTTATTCTCTAATGAATCTTCAAGCAATGAATTCAAGCAAGTGAATAGAGGTTTCTCTTTAGATCAACCACAGTTTAGTCCTCAATATAGTTCTGGAGATAGTAACATGATAAGCCAAATGGATTCTTCAGCTTTATATGGTAACCCTTCAATGTTACAAGGACTTTTAGGAACTGAAACAAATCAAATTCAACCTCAGCATGGTAATTCATTCGAGAATCGTTCCATGAATTTTCCATACTCATCAACAAGCTATGGTTTGAGTACAAATGAGTTAATTCCTTCTTGGTCTAAAGTATCTCATCAAAATCAAAAACAACATCAACAACCAAACAACCAATTGCATTTCACCAATAATGCTCCCTTTTGGAATGCTTCAGAGACTACTATTAAGGATGCTTCATCAAGCTTCTTGCCCCCATTTACCACACCAAATTTTGGTGCACAAACAAAGAATATATCTGAAGGTAGGGACTCAAGTGCTATGGTGAAAAAAAGTGGGAGTGAGCCTGCACCAAAAAGGTCCAAAAATGAAACCCCATCACCTTTGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACAGAATCACTGCACTTCAACAATTGGTTTCACCTTTTGGAAAGACTGATACAGCCTCAGTGCTCTCTGAAGCAATTGAATATATCAAGTTTCTCCATGAACAAGTGACTGTTTTAAGCACCCCATATATGAAAAGTGGAGCTCCAATCCAGCATCAACAGAGTTCTGGTAAATCTAAGGAAGCAGATGGTCCAAAGCAGGATCTTAGAAGCAGAGGGCTATGTTTAGTACCAGTTTCTAGTACATTTCCAATGACTCATGAACCCACAGTTGAATATTGGACACCAACATTTGGAGGAACTTTCAGATAA 1332 0.3844 MAEEQFQASGNWWETPARNMRFESVEQQQQQSSSFGGWQQQQQHHDTMSASGSSSVVFHDTTQKLQPSDSSTSNNDSNLHMMGLGLSSQNIDWNQASILNEKASEGSFRSMLQENLNSTGTNFEQETSGIGIGVELSHQVNWRQEKLFSNESSSNEFKQVNRGFSLDQPQFSPQYSSGDSNMISQMDSSALYGNPSMLQGLLGTETNQIQPQHGNSFENRSMNFPYSSTSYGLSTNELIPSWSKVSHQNQKQHQQPNNQLHFTNNAPFWNASETTIKDASSSFLPPFTTPNFGAQTKNISEGRDSSAMVKKSGSEPAPKRSKNETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPIQHQQSSGKSKEADGPKQDLRSRGLCLVPVSSTFPMTHEPTVEYWTPTFGGTFR* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1738 443 MobiDBLite consensus disorder prediction 1 83 - -
Mtr8g1738 443 MobiDBLite consensus disorder prediction 387 411 - -
Mtr8g1738 443 MobiDBLite consensus disorder prediction 287 331 - -
Mtr8g1738 443 MobiDBLite consensus disorder prediction 21 83 - -
Mtr8g1738 443 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 323 372 IPR011598 GO:0046983
Mtr8g1738 443 PANTHER TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 19 431 - -
Mtr8g1738 443 SMART finulus 334 378 IPR011598 GO:0046983
Mtr8g1738 443 CDD bHLH_AtbHLH_like 329 380 IPR045239 -
Mtr8g1738 443 MobiDBLite consensus disorder prediction 287 307 - -
Mtr8g1738 443 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 19 431 - -
Mtr8g1738 443 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 333 390 IPR036638 GO:0046983
Mtr8g1738 443 Gene3D - 333 394 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1738 Mtr-Chr8 25924000 25928003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1738 101 443 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 44.935 9.62e-74 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1738 - - gmx:100818424 564.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1738 8 25924000 25928003 Mtr8g1738 8 25924000 25928003 ECH