Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1737 ATGGCATCTGAATCCTCTAGCATCTCTTCCACTTCACGAGATCGAGGTGATTCTACCCACTCAAAAAAAGTGACGAACATGAAGGAGATTGAGCAGATTCAATCCTCAAACTCAAAACCCGACAAACCTATTGATTTTATGAAGCTATCAAAAGAAGATTCAGTTCCCGTGTCAAAGGTGAAAGAGCACAATTTTTTTGGCCCTATTCGAATTGGTTCATCGTCTTGTTTTCCTACCGACAACAATCAAGGAAAAGATGAGAACATCAATGAAGAGAAGAATTCAGATTCAAGATCCTTTTCATGCTCCTTTTGTAAGAGGCAATTTTCTACTTCTCAAGCGTTGGGAGGACACCAGAACGCTCATAAGGCGGAACGTACTTTAGAAAAGCAACGGAAACAAAGGTATGATGATGGTGTTTTAGGTTTAGGGCAATCTTACTTTAACTCTACTCTTTTTCGACCTTATGATTATAGGTCAATCGGGATTAGAACCGAGTCAATGATTCAAAAACCACATTATTTTAGCCCTAAGATTACCCCACACAGTTTTGGGTACAGCCATAGTGCTTTGTTGCAAGATATCTTAAATCCTTCTCTCGTGTCATTGAGAAATATGGGGGGTAGTAATAGAGGGTTTGGAAACCTAGGTATTGGCGGTGCAACTACTTCAAGAATCGAAGATGGTACAAATAATAATAAAATTGGTGCTATTTTAAAATTGGGAGATTCTTCTACAAATATTGCTACAAGTTCAAACTCAAACATGGAAAAGCAAATTATTGTGCTTCCCACTTCTCCCAAAGATGGTATTCATGATCTATCAAAGTCTAACAATGAAGAAGAACCTTCCGATTCTGGATCATCTGAGCTAGATTTATCACTCAAGCTTTAA 894 0.3814 MASESSSISSTSRDRGDSTHSKKVTNMKEIEQIQSSNSKPDKPIDFMKLSKEDSVPVSKVKEHNFFGPIRIGSSSCFPTDNNQGKDENINEEKNSDSRSFSCSFCKRQFSTSQALGGHQNAHKAERTLEKQRKQRYDDGVLGLGQSYFNSTLFRPYDYRSIGIRTESMIQKPHYFSPKITPHSFGYSHSALLQDILNPSLVSLRNMGGSNRGFGNLGIGGATTSRIEDGTNNNKIGAILKLGDSSTNIATSSNSNMEKQIIVLPTSPKDGIHDLSKSNNEEEPSDSGSSELDLSLKL* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1737 297 PANTHER ZINC FINGER PROTEIN KNUCKLES 71 297 - -
Mtr8g1737 297 ProSitePatterns Zinc finger C2H2 type domain signature. 102 122 IPR013087 -
Mtr8g1737 297 SUPERFAMILY beta-beta-alpha zinc fingers 97 128 IPR036236 -
Mtr8g1737 297 MobiDBLite consensus disorder prediction 281 297 - -
Mtr8g1737 297 PANTHER ZINC FINGER PROTEIN JAGGED 71 297 IPR045320 GO:0003700
Mtr8g1737 297 Pfam C2H2-type zinc finger 100 124 - -
Mtr8g1737 297 Gene3D Classic Zinc Finger 81 140 - -
Mtr8g1737 297 ProSiteProfiles Zinc finger C2H2 type domain profile. 100 127 IPR013087 -
Mtr8g1737 297 MobiDBLite consensus disorder prediction 266 297 - -
Mtr8g1737 297 MobiDBLite consensus disorder prediction 76 96 - -
Mtr8g1737 297 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1737 Mtr-Chr8 25903780 25904673 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1737 89 172 C2H2 Transcription Factor Family AT5G10970 39.286 5.17e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1737 - - mtr:MTR_3g011970 391.734