Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1732 ATGACAATTATTGCTACCATTTTTGTCATATCTAAGTTTCTACTATTCTTCTCCAAATTTTCCACTGCAGCCGATACTATTAGTCAATCAGAATCACTTTCAGATGGAAGCACCTTGATTTCCAAAGATGGAACCTTCGAATTAGGTTTCTTCAGTCCAGGTAATTCCCCAAACCGCTATGTCGGAATTTGGTACAAAAACATCCCGGTTAAGACTGTAGTTTGGGTTGCCAATCGCGATAATCCATGCAAAGATAACTCCAGCAAGTTGATAATAAACGAAGAAGGAAACCTTGTTGTTCTCGGCAACAATCAGTCTCTTCTATGGTCGACAAATACAACTAAGATGACTTCCATTCCCATCGCGCAACTCCTCGACAATGGAAATTTAGTACTTAAAGATGAAAGGGATGAAGAGAATTTCTTGTGGCAAAGCTTTGATTATCCTGATAATACAATATTAGCAGGAATGAAGATTGGTTGGGACAAGAAAAGTGGTATAAATAGGGGTTTCAATGCATGGAAAAACTGGGAAGACCCGTCTTCGGGTAATTTTACTTCAGGTATGAGACTTAGCATTATTCCAGAAATGTTTATTTGGAAAGATTCAGTTGAGATTTTCAGAACAGGACCATTTAGTAACGTATTTGCATTGCAAGAGAATCCAGTTTATAGTTACGAATTCGTAAACAATGAAGACGAAGTTTATTATATATACACACTCAAGAACACCTCTGTGATTACCATACTTGTTTTGAATCAAACTCTTTTACTTCGTCAACGTCTCATTTGGATTCCTGAATCGAAAACATGGAATGTTTACCAAAACTTTCCACAAGATAGGTGTGATGATTATAACATCTGTGGTGCAAATGGAAATTGTGTCATTGGTGGATCGCCGATTTGTAAGTGCTTAGACGGGTTTAAGCCGAAATCACCTCAACAGTGGAATGCAATGGACTGGACACAAGGATGCGTGCGAGGCGGAAATTGGACTTGTGGAGACGAGAGTCGAGATGGATTTCTTAAACTTGTTAAAATGAAGGTACCAGATACTAAAAATTGTTGGGTTAATGAAAATATGACACTGGATGAATGTAAGGTCAAATGTTTGCAAAATTGTTCATGCACAGCTTACTCAAGCTTAAGCCCTAAGGAAGGAAGCATCGGTTGTTCTATATGGTTTGATGATCTTGTAGATTTGAGAGGTTCAGAAAGTGGGCAAGACTTGTATGTACGCACCGACACTTCTAATATAGATAACAAAGACGGGCGTAACAAGAAGGTTAGCTTTGGAGTTCCAATCATCGTTTCAGTAGTCATTGTGATGCTATTGGCTTTCTGCGTTTACAAAAGAAAGATGAATAATAAAGCCAAAGAGAAATCAGAAAACGACATATGGATGGAAGACCAAAATGATGTAGAGCTTCCTTTCTTTGATCTTTCAACAATACTTGATGCAACTAATAAGTTCTCAACGGACAACAAACTTGGTGAAGGTGGTTTTGGACCGGTATACAAGGGTATACTACAAGATGGTCAAGAAATAGCAGTCAAAAGACTTTCTGGGAATTCTATACAAGGATTGGAAGAATTTAAGAGTGAAGTAATATTATGTGCTAAACTTCAACACCGAAATCTTGTTAAGGTGATTGGTTGTTGCATTGAAAAAGATGAGAAAATACTGGTTTATGAACACATGTCAAACAAAGGCTTGGATTCATTTATTTTTGATCCAATTCAAAGTAAACTGTTAGATTGGTCGACGCGTTTTAACATCTTGTATGGAATTGCTCGAGGTCTTCTTTATTTACATCAAGATTCAAGATTGAGGATCATACATAGAGATTTGAAGGCAAGTAATATTTTATTAGACAACGATATGAATCCAAAAATTTCAGATTTTGGTTTGGCTAGAATGTGTGGAGCTGATCAAATCGAAGGGAAAACAATTCGAATCGTTGGCACTTATGGTTATATGGCACCTGAATATGCCATCGATGGATTATTCTCTATTAAATCAGATGTATTTAGTTTTGGCGTATTAGTCCTCGAACTTATAAGTGGACTGAAAAATAGGACACGTACCTACAATCAACAAGATCACAATCTTATTGCGCATGCATGGAGATTATGGAAGGAGGGAACTATACACACATTGATTGATACTAATTTGATGGATACATGTATTCTACATGAAGCTTTGCGGTGTTTACAAATAGGTCTTTTGTGTCTGCAACATCTTCCTATTGATAGACCAAACATGACATCTGTGGTTGTAATGTTGAGCAGTAATTCTGCTTTACCTCAACCACATGAACCAAGTTACTTATTTAGCAACGTATCCAATGAAATAGAATCTTCATCTTCTGAAATACAGATATCATCTTCAATAAATAAAGTAACTATATCCTTATTAGATGCTAGATGA 2430 0.3663 MTIIATIFVISKFLLFFSKFSTAADTISQSESLSDGSTLISKDGTFELGFFSPGNSPNRYVGIWYKNIPVKTVVWVANRDNPCKDNSSKLIINEEGNLVVLGNNQSLLWSTNTTKMTSIPIAQLLDNGNLVLKDERDEENFLWQSFDYPDNTILAGMKIGWDKKSGINRGFNAWKNWEDPSSGNFTSGMRLSIIPEMFIWKDSVEIFRTGPFSNVFALQENPVYSYEFVNNEDEVYYIYTLKNTSVITILVLNQTLLLRQRLIWIPESKTWNVYQNFPQDRCDDYNICGANGNCVIGGSPICKCLDGFKPKSPQQWNAMDWTQGCVRGGNWTCGDESRDGFLKLVKMKVPDTKNCWVNENMTLDECKVKCLQNCSCTAYSSLSPKEGSIGCSIWFDDLVDLRGSESGQDLYVRTDTSNIDNKDGRNKKVSFGVPIIVSVVIVMLLAFCVYKRKMNNKAKEKSENDIWMEDQNDVELPFFDLSTILDATNKFSTDNKLGEGGFGPVYKGILQDGQEIAVKRLSGNSIQGLEEFKSEVILCAKLQHRNLVKVIGCCIEKDEKILVYEHMSNKGLDSFIFDPIQSKLLDWSTRFNILYGIARGLLYLHQDSRLRIIHRDLKASNILLDNDMNPKISDFGLARMCGADQIEGKTIRIVGTYGYMAPEYAIDGLFSIKSDVFSFGVLVLELISGLKNRTRTYNQQDHNLIAHAWRLWKEGTIHTLIDTNLMDTCILHEALRCLQIGLLCLQHLPIDRPNMTSVVVMLSSNSALPQPHEPSYLFSNVSNEIESSSSEIQISSSINKVTISLLDAR* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1732 809 Pfam S-locus glycoprotein domain 212 312 IPR000858 GO:0048544
Mtr8g1732 809 Pfam Protein tyrosine and serine/threonine kinase 493 730 IPR001245 GO:0004672|GO:0006468
Mtr8g1732 809 Pfam Domain of unknown function (DUF3403) 763 809 IPR021820 GO:0004674
Mtr8g1732 809 SMART ntp_6 336 414 IPR003609 -
Mtr8g1732 809 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 180 IPR036426 -
Mtr8g1732 809 CDD STKc_IRAK 497 762 - -
Mtr8g1732 809 ProSiteProfiles PAN/Apple domain profile. 333 415 IPR003609 -
Mtr8g1732 809 ProSiteProfiles Protein kinase domain profile. 491 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1732 809 SMART blect_4 30 149 IPR001480 -
Mtr8g1732 809 Gene3D - 18 146 IPR036426 -
Mtr8g1732 809 CDD PAN_AP_plant 334 414 - -
Mtr8g1732 809 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 32 802 - -
Mtr8g1732 809 Gene3D Transferase(Phosphotransferase) domain 1 567 773 - -
Mtr8g1732 809 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Mtr8g1732 809 Pfam PAN-like domain 333 401 IPR003609 -
Mtr8g1732 809 Gene3D Phosphorylase Kinase; domain 1 441 566 - -
Mtr8g1732 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Mtr8g1732 809 SUPERFAMILY Protein kinase-like (PK-like) 474 795 IPR011009 -
Mtr8g1732 809 PIRSF SRK 1 809 IPR024171 GO:0004674
Mtr8g1732 809 Pfam D-mannose binding lectin 72 175 IPR001480 -
Mtr8g1732 809 CDD B_lectin 30 149 IPR001480 -
Mtr8g1732 809 Gene3D Hepatocyte Growth Factor 332 414 - -
Mtr8g1732 809 SMART serkin_6 491 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1732 809 ProSiteProfiles EGF-like domain profile. 278 314 IPR000742 -
Mtr8g1732 809 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 32 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1732 Mtr-Chr8 25779447 25784711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1732 441 809 Receptor kinase-like Gene Family AT4G23150 49.733 4.25e-122 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g1732 PK_Tyr_Ser-Thr 4.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1732 - - gmx:100790436 1076.62