Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1724 ATGGCCATTCTATCTATCATGTTTTTTGTTGTTAATTTACTCTTTTTTTCCATCAAAATTTCCTCTGAAACAGATATCATAACACAATTTCTTCCACTACATGATGGAAGCACCTTGGTCAATGGAGCATTTGAACTGGGTTTCTTCAGTCCTGGTAGTTCCACAAACCGCTATGTAGGAATTTGGTTCAAAACTATCCCTTTAAAAACAGTTGTTTGGGTAGCAAATCGCGACAATCCAATCAGTGACAAATCCGGCATATTGAGCGTAAACAAAGAAGGAAACCTTGTTCTTCTCAGCAAAAATGGCACAACTCATTGGTCAACAAATGTAACAACCAAACCTTCAACCTCAAGCTTCATAGCAAAGCTCTTAGGTACCGGAAACTTGGTTGTAAATAATGAGAAAGACCATAGTGATCATGGCTTTTACTTGTGGCAGAGCTTTGACTATCCTAGTGATACAATTCTTCCAGGAATGAAGCTTGGTTGGAACCTTACGAGCGGTCTTAATAGGCAACTAACAGCTTGGAAGAATTGGGATGACCCTTCTTCGGGTCAAACGACTTATGGCTACATAAGAAGTGACAATCCTGAATCGGAGATAAGGAATGGTTCGTCGATGATATACAGAAGTGGACCTTTCAATGGTATTCGTTTCGCTGCTACACAAAAATTAAAACATGTTCCATTATTCAACGTCGATTTTGTGTACAAAAAGGATGAGTATTATTTCTCTTACGAACCCAAAAATCGGTCATTACTTTCGAGAATTGTCATCAACCAAACAATTTCTACTCTTCAACGCTTAACGTGGTCCGAAGAGAATCAAAGATGGATGTTTTATTTGAATGTTCCAAGGGAGGAATGCGATATCTACAATCGATGTAGTTCATTTGGGATCTGCGCTATGACAGGTAAGTCCTCAATGTGTGATTGTTTAACTGGCTTCACTCCAAAATCGCCTCGAAAGTGGAGTGAAAAGGATTGGAGTCAAGGATGTGTGCATAATGAAACTTGGAGGTGTAGAGAGAAAAATAAAGATGGCTTCATAAAATTTCAACATGTGAAGGTTCCAGACACAAAGCAAGTTTGGATAGATAGAAGTATGACACTTGAGAAATGTAAGGGCAAATGTTGGGAGAATTGTTCATGTACAGCTTATGCAAACACAAACATCCTTGGAAATGGAAGTGGTTGCATTCTTTGGTTTGGTGATCTTTTGGACTTGAGAGAATTACCAGATGCTGGACAAGATCTATATGTTAGATCTCCTGTCTCCGAAACAGCAAACCAAGATAAAGTAGCTAAGACTCAAGGAAATCGATATGGTTCAAGGAAAATGGTAGTTGTGGTCTCATGTACCACTTCATTAATTGCGATGCTTTTGATATTCATCACGTTTTTTTGTTGGAGGAGAAAAACCAAATCCAAATTACGAGAGGAAACAAGAATCATGAAGACAAAAGTGAAGAGAAATGAAATGAAACAAGAAGATTTGGAACTTCCTTTGTTTGACTTTGGTACAGTAACATTTGCCACTAATGACTTCTCAAATGACAACAAACTTGGTGAAGGTGGTTTTGGTCCTGTTTATAAGGGCACATTACCAGATGGACAAGATATAGCAGTTAAACGACTTTCACATACCTCTACTCAAGGAATCAATGAATTTAAGAATGAGGTTGTATTTTGTTCCAAACTCCAACATAGGAACCTAGTTAAGGTTCTTGGCTTTTGCATTGAAGAACATGAGAAATTACTCATCTATGAATATATGCCCAATAAAAGCTTAGACTTCTTTCTTTTTGATTCGTCTCGAAGTAAAGTTTTAGATTGGTATACGCGGTTCAACATTATAGGTGGTATCGCTAGAGGACTTCTTTACCTTCACCAGGATTCTAGATTAAGGATCATACATCGAGATTTAAAAGCGAGTAATATTTTATTAGATAATGATTTGAGTCCAAAAATATCTGATTTCGGCCTAGCTCGAATGTGTGGAGGTGATCAGATTCAAGGAACTACAAGTAGAGTTGTTGGTACATATGGTTATATGGCACCTGAATATGCGATCGATGGGATATTCTCCATCAAATCTGATGTATATAGCTTTGGAATTTTATTATTAGAGATTATAAATGGAAAGAGAAATAAAGGACTTTCCTATTCAAATCACAGCTACAATCTTATTGGGCATGCATGGAGATTGTGGAAAGAATGCATCCCAATGGAATTTTTGGATACTTGTTTGGAAGATGGTTCATATATTCAATCTGAAGTATTGAGATGCATTCATATTGGTCTTCTATGTGTGCAGCAGTATGCAAATGACAGACCAACTATGACATCTGTGCTTGTAATGCTAACTAGTGATAGCACTCTCCCCCAACCAAAAGAGCCTATCTTCTTAACTGATGAATTTACTTCTGAACAGAAGATTTCTTATTCAACAAATGAAGTATCTATAACAATGTTGGAACCTAGATAG 2490 0.3719 MAILSIMFFVVNLLFFSIKISSETDIITQFLPLHDGSTLVNGAFELGFFSPGSSTNRYVGIWFKTIPLKTVVWVANRDNPISDKSGILSVNKEGNLVLLSKNGTTHWSTNVTTKPSTSSFIAKLLGTGNLVVNNEKDHSDHGFYLWQSFDYPSDTILPGMKLGWNLTSGLNRQLTAWKNWDDPSSGQTTYGYIRSDNPESEIRNGSSMIYRSGPFNGIRFAATQKLKHVPLFNVDFVYKKDEYYFSYEPKNRSLLSRIVINQTISTLQRLTWSEENQRWMFYLNVPREECDIYNRCSSFGICAMTGKSSMCDCLTGFTPKSPRKWSEKDWSQGCVHNETWRCREKNKDGFIKFQHVKVPDTKQVWIDRSMTLEKCKGKCWENCSCTAYANTNILGNGSGCILWFGDLLDLRELPDAGQDLYVRSPVSETANQDKVAKTQGNRYGSRKMVVVVSCTTSLIAMLLIFITFFCWRRKTKSKLREETRIMKTKVKRNEMKQEDLELPLFDFGTVTFATNDFSNDNKLGEGGFGPVYKGTLPDGQDIAVKRLSHTSTQGINEFKNEVVFCSKLQHRNLVKVLGFCIEEHEKLLIYEYMPNKSLDFFLFDSSRSKVLDWYTRFNIIGGIARGLLYLHQDSRLRIIHRDLKASNILLDNDLSPKISDFGLARMCGGDQIQGTTSRVVGTYGYMAPEYAIDGIFSIKSDVYSFGILLLEIINGKRNKGLSYSNHSYNLIGHAWRLWKECIPMEFLDTCLEDGSYIQSEVLRCIHIGLLCVQQYANDRPTMTSVLVMLTSDSTLPQPKEPIFLTDEFTSEQKISYSTNEVSITMLEPR* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1724 829 CDD B_lectin 31 152 IPR001480 -
Mtr8g1724 829 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 183 IPR036426 -
Mtr8g1724 829 Pfam D-mannose binding lectin 70 178 IPR001480 -
Mtr8g1724 829 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 811 - -
Mtr8g1724 829 Gene3D Phosphorylase Kinase; domain 1 475 592 - -
Mtr8g1724 829 SMART ntp_6 345 424 IPR003609 -
Mtr8g1724 829 Gene3D - 19 149 IPR036426 -
Mtr8g1724 829 Pfam PAN-like domain 342 410 IPR003609 -
Mtr8g1724 829 ProSiteProfiles Protein kinase domain profile. 517 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1724 829 Pfam S-locus glycoprotein domain 210 321 IPR000858 GO:0048544
Mtr8g1724 829 ProSiteProfiles EGF-like domain profile. 286 323 IPR000742 -
Mtr8g1724 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Mtr8g1724 829 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 14 811 - -
Mtr8g1724 829 ProSiteProfiles PAN/Apple domain profile. 342 425 IPR003609 -
Mtr8g1724 829 CDD STKc_IRAK 523 790 - -
Mtr8g1724 829 PIRSF SRK 1 829 IPR024171 GO:0004674
Mtr8g1724 829 SUPERFAMILY Protein kinase-like (PK-like) 502 817 IPR011009 -
Mtr8g1724 829 CDD PAN_AP_plant 343 425 - -
Mtr8g1724 829 SMART serkin_6 517 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1724 829 SMART blect_4 30 152 IPR001480 -
Mtr8g1724 829 Pfam Protein tyrosine and serine/threonine kinase 520 785 IPR001245 GO:0004672|GO:0006468
Mtr8g1724 829 Gene3D Transferase(Phosphotransferase) domain 1 593 800 - -
Mtr8g1724 829 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1724 Mtr-Chr8 25588668 25593161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1724 449 803 Receptor kinase-like Gene Family AT4G23230 52.809 1.73e-125 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g1724 PK_Tyr_Ser-Thr 3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1724 - - mtr:MTR_8g465510 1575.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1724 8 25588668 25593161 Mtr8g1724 8 25588668 25593161 ECH