Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1723 ATGTCCACTATATTCCCATCCTACGATCGATTCGATCATCCTTTTTCCTTCTACCATAAATTAAACTCATCTTCCTGTCTAGAATCAAATAAAATGGTTGATATTAGCTTCAAAAAGTTAATCATTTTGTTCTTTTTATCTTCCAGCTTGAGAACAACCACTTCACTTGACACTTTATCTCTGAATCAATCTATCCATGATAGCCAGAGTTTGGTTTCAGCAAAAGGAACTTTTGAAGTCGGTTTCTTCAGTCCAGGAAATTCTAGAGGAAGATATTTAGGTATGTGGTACAAAAATTTAACCCCTTTAACAGTTGTTTGGGTTGCCAACAGAGAAACACCACTGCACGATAATTTAGGAATCTTAAAGATCAATGAAAATGGTGTTCTTGAGATTCTCAATGGCAAAAACGATGCCATTTGGTCCTCGAATGCATCAAACAGACCGGCAAATAATTCAATATCTGCACAGCTATTGGATGATGGAAATCTTGTGTTGAAAAATTCGGCAAACAATATTTTGTGGCAGAGTTTTGACTATCCAAGTGATACATTTTTGCCAGGAATGAAGCTTGGATGGAACTTAGTAACCGGTCAAAACAAGTTCTATTCGTCGTGGAAAAGTTCAAATGATCCAGCTAAGGGAGATTATTCGGTTAATATTGACATTAGAGGATATCCTCAAATAGTTGTTATGAAGGGATCTGTGATAAGATTGAGAATAGGATCATGGAATGGTCAAACTTTTACCGGATATCCAATACAACCGTTAAAACAAAAGCAAAGATATGAATTTGTCATGACTGACAAAGAAGTGTATCATTGGTATGAACTCATTGATAGCTCTGGTGTGCAAATTTATGCACTCTCCCCTTTGGGAAATCTGCATGCTTTAGCTTGGACAAGTGAAACAAGCGATAGGATAGTGATCGAAACTGGCATGGAAGATTCGTGTGATAGTTATGCAATGTGTGGTGCTAATTCAGTATGCAATATGGACGAAAATGTTCCTAAATGTGAATGCTTAAAAGGTTATGTTCCTAAGTTTCTCGAACAGTGGAATATATCATATTGGTCTAGTGGTTGTGTTCCGAAAATTAAGTCTTTTTGTGATATCAATTCTACAACTGGCTTCTTGAAGTACGGAGAAATGAAATTGCCGGACACATCTTCATCATGGTACAATAAAACCATGAGCCTGCTGGAATGTCAAAAAGCGTGCATGAAAAACTGTTCGTGTACGGCTTATACAAATGCGGATATCCGAAATGGAGGAAGTGGTTGTTTGCTTTGGATTGATGATCTGGTTGACATGAGAACATTCTCTCAGTGGGGACAAGATCTCTATATCAAAGTCCCTTCTTCAGAATTGGATGATGTTAGTGTTAATAGCAACAAAAACCAGAGGCAGCAGTTGATACGGATCACAGTTGTCGTGATAATTTCAGGATTCCTCACATGTGCTTGCATAATAATATCTATAAAGATAGTGGCGCCGAGAGTATATCATCTAGCACCATTTCAATGGCGGAAAAAATATTTTAGGTTAAAGAAAGAAGAGCCTGATCTGCCAATATTTAGTTTTCCAATCATTGTTAAAGCAACCGGTAATTTTTCTAGCAGAAATAAACTTGGGGAAGGTGGATTTGGACCAGTTTATAAGGGTACCCTGATAGGCGGAAAAGAGGTAGCCATAAAACGGAACTCAAAAATGTCTGATCAAGGGTTGGAGGAATTTAAAAATGAAGTTTTGTTGATTGCAAAGCTTCAGCACCGTAATCTTGTGAAGCTTCTCGGTTGTTGTATTCACAGAGAGGAAAAATTGTTGATCTATGAATACATGCCCAATCGGAGCTTAGACTACTTCATCTTCGATGAAACTAGAAGCAAACTCTTGGACTGGTCGAAGCGTTCCCATATTATTGCTGGCGTTGCTAGAGGACTTCTTTATCTTCACCAAGACTCCAGACTTCGAATAATTCACAGAGATTTAAAGTTAAGCAATATCTTACTAGACGCCCTTATGAATCCAAAAATCTCAGACTTCGGCCTAGCTCGGACATTTTGTGGAGATCAAGTTGAAGCCAAAACAAGGAAATTGGTTGGAACATATGGCTACATGCCTCCAGAGTATGCCGTGCATGGTCGTTACTCCATGAAATCAGATGTGTTTAGTTTCGGAGTAATAGTATTGGAGATAATAAGCGGGAAAAAGATTAAGGTGTTTTATGATCCAGAACACTCTCTCAACCTTCTTGGCCATGCATGGAGACTCTGGATTGAAAACATGGCAATGGATCTAGTTGATATGCACTTACTTGAAACAATCAATTATTCAGAACTCTTACGATATATGCATGTTGGGTTGTTGTGCGTACAAGAAAAACCGGGAGATAGACCAGACATGTCATCTGTAATTCTTATGTTGAATGGTGAGAAATTATTGTCTCAGCCGAAAGCTCCGGGATTTTATACTGGAAGGGGCTTACCTAAAACGATATCGCCAACTTCAAATGAGATGTCAATTACAACTTTTGAGGCAAGATAA 2547 0.3816 MSTIFPSYDRFDHPFSFYHKLNSSSCLESNKMVDISFKKLIILFFLSSSLRTTTSLDTLSLNQSIHDSQSLVSAKGTFEVGFFSPGNSRGRYLGMWYKNLTPLTVVWVANRETPLHDNLGILKINENGVLEILNGKNDAIWSSNASNRPANNSISAQLLDDGNLVLKNSANNILWQSFDYPSDTFLPGMKLGWNLVTGQNKFYSSWKSSNDPAKGDYSVNIDIRGYPQIVVMKGSVIRLRIGSWNGQTFTGYPIQPLKQKQRYEFVMTDKEVYHWYELIDSSGVQIYALSPLGNLHALAWTSETSDRIVIETGMEDSCDSYAMCGANSVCNMDENVPKCECLKGYVPKFLEQWNISYWSSGCVPKIKSFCDINSTTGFLKYGEMKLPDTSSSWYNKTMSLLECQKACMKNCSCTAYTNADIRNGGSGCLLWIDDLVDMRTFSQWGQDLYIKVPSSELDDVSVNSNKNQRQQLIRITVVVIISGFLTCACIIISIKIVAPRVYHLAPFQWRKKYFRLKKEEPDLPIFSFPIIVKATGNFSSRNKLGEGGFGPVYKGTLIGGKEVAIKRNSKMSDQGLEEFKNEVLLIAKLQHRNLVKLLGCCIHREEKLLIYEYMPNRSLDYFIFDETRSKLLDWSKRSHIIAGVARGLLYLHQDSRLRIIHRDLKLSNILLDALMNPKISDFGLARTFCGDQVEAKTRKLVGTYGYMPPEYAVHGRYSMKSDVFSFGVIVLEIISGKKIKVFYDPEHSLNLLGHAWRLWIENMAMDLVDMHLLETINYSELLRYMHVGLLCVQEKPGDRPDMSSVILMLNGEKLLSQPKAPGFYTGRGLPKTISPTSNEMSITTFEAR* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1723 848 CDD PAN_AP_plant 370 453 - -
Mtr8g1723 848 Gene3D - 52 178 IPR036426 -
Mtr8g1723 848 Gene3D Transferase(Phosphotransferase) domain 1 614 819 - -
Mtr8g1723 848 SUPERFAMILY alpha-D-mannose-specific plant lectins 105 212 IPR036426 -
Mtr8g1723 848 SMART blect_4 62 181 IPR001480 -
Mtr8g1723 848 Pfam S-locus glycoprotein domain 240 349 IPR000858 GO:0048544
Mtr8g1723 848 Pfam PAN-like domain 373 438 IPR003609 -
Mtr8g1723 848 ProSitePatterns Serine/Threonine protein kinases active-site signature. 659 671 IPR008271 GO:0004672|GO:0006468
Mtr8g1723 848 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 46 846 - -
Mtr8g1723 848 ProSiteProfiles Bulb-type lectin domain profile. 56 179 IPR001480 -
Mtr8g1723 848 SMART ntp_6 373 452 IPR003609 -
Mtr8g1723 848 Pfam D-mannose binding lectin 104 207 IPR001480 -
Mtr8g1723 848 Gene3D Phosphorylase Kinase; domain 1 512 613 - -
Mtr8g1723 848 ProSiteProfiles Protein kinase domain profile. 538 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1723 848 PIRSF SRK 30 848 IPR024171 GO:0004674
Mtr8g1723 848 SUPERFAMILY Protein kinase-like (PK-like) 521 814 IPR011009 -
Mtr8g1723 848 CDD STKc_IRAK 544 811 - -
Mtr8g1723 848 ProSiteProfiles PAN/Apple domain profile. 370 453 IPR003609 -
Mtr8g1723 848 SMART serkin_6 538 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1723 848 CDD B_lectin 62 181 IPR001480 -
Mtr8g1723 848 Pfam Protein tyrosine and serine/threonine kinase 541 804 IPR001245 GO:0004672|GO:0006468
Mtr8g1723 848 Gene3D Hepatocyte Growth Factor 370 449 - -
Mtr8g1723 848 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 46 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1723 Mtr-Chr8 25570977 25574647 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1723 526 848 Receptor kinase-like Gene Family AT4G11530 55.786 4.37e-119 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g1723 PK_Tyr_Ser-Thr 1.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1723 - - mtr:MTR_8g465570 1499.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1723 8 25570977 25574647 Mtr8g1723 8 25570977 25574647 ECH