Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1722 ATGACTCATACCATCAAAGTGTTATTTCGTTTGTTCATTTTAATCTTCTACATGAGAACTAGCACTTCACTTGACAGTTTAGCCGTCAATCAATCTATCCGAGACGGCCAGACATTAGTTTCGGCTAATGGGATTTTTGAAATAGGTTTCTTCAGTCCTGGAAATTCAAAAGGTCGGTATTTGGGTATGTGGTACAAGAATTTAACACCTTTAACAGCCGTATGGGTGGCTAACAGGGAAACACCGGTGCACAATAACTCCGGAGTCTTAAAACTCAATGAAAATGGTGTTCTTGTTATTCTCAGTGGCGCAAACAGCAATGTTTGGTCGTCCAAGATATCAGAAACAGTCTTCGTCAATAATTCAATAAATGCTCAGCTCTTGGACACGGGAAATTTTGTGTTGAAAAATGGGAAGGACTATATTTTGTGGCAGAGTTTTGATTATCCATGTGATACATTACTGCCGGGAATGAAGCTTGGATGGAACTTAGTAACTGGTCTAAACAAGATTCAATCATCGTGGAAAAGTACAGATGATCCAGCAAAGGGAGAATATTCTAGTGGTGTTGACCTCCGAGGATATCCACAAGTAGTTATAATGAAGGGGTCCGCCATAAAATTGAGAGTAGGATCATGGAATGGTCGCTCTTTTACCGGATATCCAACACAACCATTGAAAGAGAAGCAAATATTTGAATTTGTCATAACTGACAAAGAAGTGTATCATCGATATGAAGTCGTTGATAGATCAATGATTTGCGTATATAGACTGTCCCTTACAGGAAATTTGCAGGCTTTATGTTGGACAAGTCATTCGAGCTCAAGGATAGTTATCTACACCGGCGCGGAAGATTCATGTGATAATTATGCAATGTGTGGTGCTAATTCTATATGCAATATGGATGGCAATGTGCCGAAATGTGAATGCCTGAAAAGTTATGTTCCTAAGTTTCCTGAACAATGGAATATATCATATTGGTCTGGTGGCTGCGTTCCGAAAATTGAATTAGTTTGCGGAAACAACAACACAAGTGGCTTCTTGAGGTACAAAGAAATGAAATTGCCAGACACTTCTTCATCGTTGTATAATAAGACTATGAACCTTGTGGAATGTCAAAGAGTGTGTACGAAAAATTGTTCGTGTACCGGTTATGCAAATATGGATATCCGAAATGGAGGTAGTGGCTGTCTTCTTTGGTTTGGTGATCTGGTTGATATGAGAGTAATCTCCCAATGGGGGCAAGATCTCTTTATCAAAGTCCCTTCTTCTGAACTAGATTACATTAGTGTTGATGTCCCTAGAAGCATGAAAAAGCGGCTGGTGCGGATCACAGTTGGCCTGATTACTGTTGGATTTTTAACATGTGCCTGCATAATAATATTTATAAGGAAAGTGGCACCAAGGTTATATCGTCGTGCACCATTTCAGAAAAGGCAAGTATATTCGAGATTGATAAAGGAAGACATGGATCTACCGATATTTGATTTTTCAATCCTTGTTAAAGCCACTTATAACTTCTCTAGCACAAATAAACTTGGGGAAGGTGGATTTGGACCAGTGTATAAGGGAACACTCGTAGACGGGAAGGAGGTAGCCATAAAACGACACTCAAAGGTGTCAGATCAAGGATTGGAGGAGTTTAAAAATGAAGTTGTGTTGATTGCAAAACTTCAACACCGTAATCTTGTGAAGCTTCTTGGTTGCTGCATTCATAGAGAGGAAATGTTATTGATATATGAATACATGCCCAACAAAAGTTTAGACTACTTCATCTTTGATGAAACCAGAAGCAAGCTCTTGGGCTGGACGCACCGTTCCCACATTATTGCTGGCATTGCTAGAGGACTTCTTTATCTTCACCAAGACTCTAGACTCAGAATTATTCATCGAGACTTGAAAACCAGCAATATCCTATTAGATGCCCATATGATTCCAAAAATCTCAGATTTTGGCTTGGCTCGGACATTTGGGGGAGATCAAGTTGAAGCCAAAACAAAAAAGATGGTCGGAACATATGGTTACATGCCTCCAGAGTATGCAGTGCACGGTCGTTACTCCATGAAATCCGATGTGTTTAGTTTTGGCGTAATAATATTGGAGATAATTAGTGGGAATAAAATTAAGGGGTTTTACGACTCAGAAAACTCTCTCAACCTCCTTGGATATGCTTGGAGACTCTGGATTGAAAACATGCCACTGGAACTATTAGATACGCATTTATTTGAGATGTGCATTTCTTCTGAAGTCATAAGAAGCATACATGTTGGGTTGTTATGCGTACAACAAAAACCCGAAGATAGGCCGGACATGTCCTCTGTCATTCTTATGTTGAATGGTGAGAAATTATTGCCTCAGCCGAAGGCTCCTGGATTTTATTCTGGAAAGAGTTCACTCGAAGCCACGTCTCTATCCTCAAATCAGATGTCACTTACAATTTTTGAGGCAAGATAG 2454 0.3973 MTHTIKVLFRLFILIFYMRTSTSLDSLAVNQSIRDGQTLVSANGIFEIGFFSPGNSKGRYLGMWYKNLTPLTAVWVANRETPVHNNSGVLKLNENGVLVILSGANSNVWSSKISETVFVNNSINAQLLDTGNFVLKNGKDYILWQSFDYPCDTLLPGMKLGWNLVTGLNKIQSSWKSTDDPAKGEYSSGVDLRGYPQVVIMKGSAIKLRVGSWNGRSFTGYPTQPLKEKQIFEFVITDKEVYHRYEVVDRSMICVYRLSLTGNLQALCWTSHSSSRIVIYTGAEDSCDNYAMCGANSICNMDGNVPKCECLKSYVPKFPEQWNISYWSGGCVPKIELVCGNNNTSGFLRYKEMKLPDTSSSLYNKTMNLVECQRVCTKNCSCTGYANMDIRNGGSGCLLWFGDLVDMRVISQWGQDLFIKVPSSELDYISVDVPRSMKKRLVRITVGLITVGFLTCACIIIFIRKVAPRLYRRAPFQKRQVYSRLIKEDMDLPIFDFSILVKATYNFSSTNKLGEGGFGPVYKGTLVDGKEVAIKRHSKVSDQGLEEFKNEVVLIAKLQHRNLVKLLGCCIHREEMLLIYEYMPNKSLDYFIFDETRSKLLGWTHRSHIIAGIARGLLYLHQDSRLRIIHRDLKTSNILLDAHMIPKISDFGLARTFGGDQVEAKTKKMVGTYGYMPPEYAVHGRYSMKSDVFSFGVIILEIISGNKIKGFYDSENSLNLLGYAWRLWIENMPLELLDTHLFEMCISSEVIRSIHVGLLCVQQKPEDRPDMSSVILMLNGEKLLPQPKAPGFYSGKSSLEATSLSSNQMSLTIFEAR* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1722 817 Gene3D Hepatocyte Growth Factor 339 417 - -
Mtr8g1722 817 Pfam Protein tyrosine and serine/threonine kinase 510 774 IPR001245 GO:0004672|GO:0006468
Mtr8g1722 817 ProSiteProfiles Protein kinase domain profile. 507 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1722 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Mtr8g1722 817 SUPERFAMILY Protein kinase-like (PK-like) 491 786 IPR011009 -
Mtr8g1722 817 Gene3D - 19 147 IPR036426 -
Mtr8g1722 817 Pfam D-mannose binding lectin 72 176 IPR001480 -
Mtr8g1722 817 CDD B_lectin 30 150 IPR001480 -
Mtr8g1722 817 Gene3D Phosphorylase Kinase; domain 1 471 582 - -
Mtr8g1722 817 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 815 - -
Mtr8g1722 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 181 IPR036426 -
Mtr8g1722 817 CDD STKc_IRAK 513 780 - -
Mtr8g1722 817 ProSiteProfiles Bulb-type lectin domain profile. 24 148 IPR001480 -
Mtr8g1722 817 CDD PAN_AP_plant 339 422 - -
Mtr8g1722 817 SMART serkin_6 507 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1722 817 PIRSF SRK 1 817 IPR024171 GO:0004674
Mtr8g1722 817 Pfam PAN-like domain 339 407 IPR003609 -
Mtr8g1722 817 SMART blect_4 30 150 IPR001480 -
Mtr8g1722 817 Gene3D Transferase(Phosphotransferase) domain 1 583 785 - -
Mtr8g1722 817 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
Mtr8g1722 817 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 15 815 - -
Mtr8g1722 817 ProSiteProfiles PAN/Apple domain profile. 339 422 IPR003609 -
Mtr8g1722 817 SMART ntp_6 342 421 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1722 Mtr-Chr8 25533921 25538085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1722 449 806 Receptor kinase-like Gene Family AT4G23190 53.591 7.30e-124 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g1722 PK_Tyr_Ser-Thr 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1722 - - mtr:MTR_8g465580 1251.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1722 8 25533921 25538085 Mtr8g1722 8 25533921 25538085 ECH