Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1720 ATGGTTAATCTATTATCTGGTCTCTTTCTTTTTACGGTTGTTCTGCATCATTTTGTGGCTTGCTTTGCTGCAAATACAAAAAACATCACCACAGATCAATCTGCTCTTCTAGCATTCAAATTCCTAATTACTTCGGACCCCAATAATCCGTTGGTAAATAATTGGTCAACCACCTCTTCAGTATGCAGTTGGGTTGGTGTAACTTGTGACGACCGACACGGTAGAGTTCACAGTTTGAATCTCACAAACATGGGTCTTAGAGGTACTGTTTCCCCAAACTTGGGGAATCTATCTTTCCTTGTTAAACTTGACCTCTCCTACAATACCTTTGTTGGTCCGTTTCCTAAAGAGATATGTCGGTTGCGTCGATTAAAGTTTCTTGCAATCAGCAATAACGAATTTAATGGAGGAGTTCCTACAAGGTTGGGGGACTTATCGCAACTTCAACTTTTGTCTATTGCCACTAACAATTTTAGTGGTTTAATCCCTCAATCTATCGGTAACCTTCGTGGGTTGACAATACTGGATGCTAGTAGCAACGGATTCTCTGGACACATACCTCAAACAATTTCAAACATGTCTTCACTTGAATATCTTCGTTTAGATATTAACTACTTTTCAGGAGAAATTCCAAAAGGGATCTTCGAGGATCTTACACATATGAGAACAATGGTACTGGGAAATAATAATCTTTCGGGAAGTCTTCCGTCAAGTATTTGTCAAGGGCTTCGAAATATTAGATATATTGATCTTAGTTATAACGGCCTTTCTGGTGACATGCCGAATGATTGGCATCAATGTGAAGAGATGGAAGACTTGATTCTATCAAACAACAATTTCAACAGAGGACTCATTCCAGGTGGCATCCGAAACATGACCAAACTTCAATATTTATATCTTAACGGAAACAACTTGGACGGTCATATACCTGAGGAGATTGGTTATCTTGATAAACTTGAATTTCTAATCTTGGAAAACAATAGCTTGAGTGGATCCATTCCTTCTAAACTCCTCAACATGTCATCACTGACATTCTTGAGTCTTGCCCTAAATTACCTCTCAGGCATGATTCCGTCGAATAATGGATATAACCTTCCTATGCTGCAATACCTACACTTGAATCATAACAGTTTTGTTGGCAATGTTCCAAATAGTATATTCAACTCTTCCAATCTCATTGAATTTCAATTGAGTGACAACACATTCAGCGGAACTCTGCCCAATATTGCTTTCGGAGATTTAAGGTTCCTCAGAACACTTATCATAAATAACAATGATTTTACAATAGATGATTCTCTTCAATTCTTTACTTCTTTGGGAAATTGCAGACATTTGAAATATCTAGAACTTGCAAGAAATCATATACCATCCAATCTTCCAAAGTCAATTGGAAACATAACTTCGTCAAAGTTTATTGCAGATTTGTGTGGAATTGTTGGTAAAATTCCCCTAGAAGTCGGAAACATGAGTAAATTGCTATATTTTTCTGTTTTTGGGAATAATATGACTGGACCAATACCTGGTACATTCAAAGGGTTGCAGAAACAACTTCAGTATTTGGATCTTGGAATAAATAAATTACAAGGATCATTTATTGAGGAGCTTTGTGAAATGAAGAGTTTGGGTGAGTTGTCTCTAGACAGTAATAAGCTTTCTGGAGCTTTACCAACATGTTTCGGAAATATGACTTCTCTTATAAGAGTACACATAGGATATAACAGTTTCAACTCTAGAGTACCTTTATCTCTTTGGAGTCTTAGAGATATATTAGAAGTAAATTTTACTTCTAATGCTTTAATCGGTAATCTTCCTCCCGAGATTGGGAATCTGAAAGCAATTATAATACTCGATCTATCAAGAAATCAAATTTCAAGCAACATTCCAACGTCCATCAGTTCGCTAAATACTTTGCAAAATCTCTCCTTAGCACACAATATGCTAAATGGATCAATTCCCACATCACTTGGTAACATGATAAGCTTGATATCCTTAGACATGTCCGAAAATATGCTAATCGGTATTATTCCAAAATCATTAGAATCACTTTTGTACCTTCAAAACATTAACTTATCGTATAATAGATTACAAGGAGAGATTCCTGATGGCGGACCTTTTAGGAATTTCACAGCTCAATCTTTTATGCATAATGGAGAACTTTGTGGAAATCTTCGCTTCCAAGTATCGCTTTGTCGTAAACATGATAAGAAAATGTCAATGGCAAAGAAGATATTACTCAAATGCATAATTCCCATAGTTGTGTCAGCCATTTTGGTTGTTGCATGCATCATATATTTTAGACTCAAGAGAAAAAATGTTGAAAATATTGTTGAAAGGGGTTTATCAACCTTAGGAGTTCCAAGAAGAATATCATATTATGAACTTGTGCAAGCAACAAATGGATTCAATGAGAGCAATTTACTTGGAACGGGGGGCTTTGGCTCTGTGTATCAAGGGAAGCTTCCTGATGGTGAGATGATTGCAGTTAAAGTATTTGATTTGCAAACAAAGAGCTTTGATGCAGAATGCAATGCAATGAGAAATCTACGGCATCGAAATCTGGTTAAGATTATCAGCAGTTGTTCCAATCTTGATTTCAAATCATTGGTGATGGAGTTCATGTCAAATGGAAGTGTGGACAAATGGTTATATTCAGATAACCATTGCTTAAATTTCTTGCAAAGGTTAAATATAATGATAGATGTTGCATCTGCATTGGAATATCTCCATCATGGTTCTTCAATACCCGTGGTTCATTGCGATCTAAAACCTTCTAATGTCTTGTTGGATGAAAATATGGTTGCACATGTTAGTGATTTTGGTATTTCAAAGCTCATGGATGAAGGACAATCTGAAACTCATACACAAACTTTAGCTACTCTTGGATACCTTGCACCAGAGTATGGATCAAAGGGAACTATTTCTGTCAAAGGAGATGTATACAGCTATGGGATTATGCTAATGGAAATCTTCACAAGGAGAAAGCCAACAGATGATATGTTCGTTGAAGAACTAAGTTTGAAGACATGGATCGATGGATCATTGCCTAATTCAATTATGGAGGTCTTAGATTCTAATTTAGTCCAACAATTTGGGGAACAACTTGATGATATTTTGACTCACATGTCATCTATTTTTGGTTTAGCCCTGCATTGTTGCGAATATTCTTCTGAATCAAGAATTAATATGACAGATGTTATTGCGTCACTCATCAAAATCAAGACTTTGTTTATTGGTGCACAGGCGGTCTAG 3249 0.3632 MVNLLSGLFLFTVVLHHFVACFAANTKNITTDQSALLAFKFLITSDPNNPLVNNWSTTSSVCSWVGVTCDDRHGRVHSLNLTNMGLRGTVSPNLGNLSFLVKLDLSYNTFVGPFPKEICRLRRLKFLAISNNEFNGGVPTRLGDLSQLQLLSIATNNFSGLIPQSIGNLRGLTILDASSNGFSGHIPQTISNMSSLEYLRLDINYFSGEIPKGIFEDLTHMRTMVLGNNNLSGSLPSSICQGLRNIRYIDLSYNGLSGDMPNDWHQCEEMEDLILSNNNFNRGLIPGGIRNMTKLQYLYLNGNNLDGHIPEEIGYLDKLEFLILENNSLSGSIPSKLLNMSSLTFLSLALNYLSGMIPSNNGYNLPMLQYLHLNHNSFVGNVPNSIFNSSNLIEFQLSDNTFSGTLPNIAFGDLRFLRTLIINNNDFTIDDSLQFFTSLGNCRHLKYLELARNHIPSNLPKSIGNITSSKFIADLCGIVGKIPLEVGNMSKLLYFSVFGNNMTGPIPGTFKGLQKQLQYLDLGINKLQGSFIEELCEMKSLGELSLDSNKLSGALPTCFGNMTSLIRVHIGYNSFNSRVPLSLWSLRDILEVNFTSNALIGNLPPEIGNLKAIIILDLSRNQISSNIPTSISSLNTLQNLSLAHNMLNGSIPTSLGNMISLISLDMSENMLIGIIPKSLESLLYLQNINLSYNRLQGEIPDGGPFRNFTAQSFMHNGELCGNLRFQVSLCRKHDKKMSMAKKILLKCIIPIVVSAILVVACIIYFRLKRKNVENIVERGLSTLGVPRRISYYELVQATNGFNESNLLGTGGFGSVYQGKLPDGEMIAVKVFDLQTKSFDAECNAMRNLRHRNLVKIISSCSNLDFKSLVMEFMSNGSVDKWLYSDNHCLNFLQRLNIMIDVASALEYLHHGSSIPVVHCDLKPSNVLLDENMVAHVSDFGISKLMDEGQSETHTQTLATLGYLAPEYGSKGTISVKGDVYSYGIMLMEIFTRRKPTDDMFVEELSLKTWIDGSLPNSIMEVLDSNLVQQFGEQLDDILTHMSSIFGLALHCCEYSSESRINMTDVIASLIKIKTLFIGAQAV* 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1720 1082 Pfam Protein kinase domain 802 1066 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1720 1082 SUPERFAMILY Protein kinase-like (PK-like) 783 1069 IPR011009 -
Mtr8g1720 1082 SUPERFAMILY L domain-like 31 279 - -
Mtr8g1720 1082 PANTHER - 9 407 - -
Mtr8g1720 1082 PANTHER - 283 1078 - -
Mtr8g1720 1082 SUPERFAMILY L domain-like 476 721 - -
Mtr8g1720 1082 Gene3D Ribonuclease Inhibitor 147 306 IPR032675 -
Mtr8g1720 1082 SMART serkin_6 801 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1720 1082 SUPERFAMILY L domain-like 210 470 - -
Mtr8g1720 1082 SMART LRR_typ_2 145 168 IPR003591 -
Mtr8g1720 1082 SMART LRR_typ_2 538 561 IPR003591 -
Mtr8g1720 1082 SMART LRR_typ_2 316 340 IPR003591 -
Mtr8g1720 1082 SMART LRR_typ_2 610 634 IPR003591 -
Mtr8g1720 1082 SMART LRR_typ_2 193 217 IPR003591 -
Mtr8g1720 1082 SMART LRR_typ_2 218 242 IPR003591 -
Mtr8g1720 1082 SMART LRR_typ_2 292 314 IPR003591 -
Mtr8g1720 1082 SMART LRR_typ_2 365 389 IPR003591 -
Mtr8g1720 1082 ProSitePatterns Serine/Threonine protein kinases active-site signature. 916 928 IPR008271 GO:0004672|GO:0006468
Mtr8g1720 1082 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 283 1078 - -
Mtr8g1720 1082 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 9 407 - -
Mtr8g1720 1082 Gene3D Transferase(Phosphotransferase) domain 1 873 1076 - -
Mtr8g1720 1082 Pfam Leucine rich repeat 195 256 IPR001611 GO:0005515
Mtr8g1720 1082 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Mtr8g1720 1082 Gene3D Phosphorylase Kinase; domain 1 784 872 - -
Mtr8g1720 1082 Gene3D Ribonuclease Inhibitor 411 738 IPR032675 -
Mtr8g1720 1082 ProSitePatterns Protein kinases ATP-binding region signature. 807 829 IPR017441 GO:0005524
Mtr8g1720 1082 ProSiteProfiles Protein kinase domain profile. 801 1077 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1720 1082 Gene3D Ribonuclease Inhibitor 363 410 IPR032675 -
Mtr8g1720 1082 Gene3D Ribonuclease Inhibitor 307 362 IPR032675 -
Mtr8g1720 1082 Gene3D Ribonuclease Inhibitor 31 146 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1720 Mtr-Chr8 25498417 25503479 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1720 31 1079 Receptor kinase-like Gene Family AT3G47570 32.906 1.38e-162 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr8g1720 Pkinase 2.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1720 - - mtr:MTR_8g465340 2141.7