Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1718 ATGAGCATGAAAGTTAATAAAGACTCGGACATTGCAGACAACAAGAGTATAAAAGTGAGGAGGAAAGAAGTCAAGTTGCCATTATTCAGTTTTGCAAGCGTTTCAGCAGCAACCAATAACTTCTCAGATGCAAACAAGCTTGGTGAAGGTGGCTTTGGACCTGTTTATAAGGGCATATTATTGAATGGGGATGAGGTTGCTGTAAAAAGGCTATCTCGAAGATCGGGTCAAGGATGGGAGGAGTTAAGAAATGAAGCATTGTTAATTGCAAAACTCCAACATAATAATCTTGTTAGACTTCTCGGCTGTTGCATTGAGCGAGATGAAAAAATGCTTATCTATGAATTCATGCCCAATAAAAGCTTGGATTGTTTTCTCTTCGATGCAATAAAAAGAAGGATGCTAGATTGGGGAACACGGGTTCGAATAATTGAAGGCATCGCCCAAGGACTTCTTTATCTGCATCAATATTCTAGGTTCCGGATCATTCATCGAGATTTAAAAGCTAGCAACATATTGTTAGACACCAACATGAATCCTAAAATATCAGATTTTGGAATGGCTAGGATATTTGGTGAGAATGAGCTTCAAGCAAATACAAATCGGATTGTTGGAACTTATGGCTACATGTCTCCTGAATATGCAATGGAAGGCCTTTTCTCAGTTAAATCCGACGTCTTTAGCTTTGGAGTTCTTCTGTTAGAGATTATAAGTGGCAAGAAGAATACTGGTTTTTATCAAACAAGCTCTTTCAATCTTCTTGGATATGCTTGGGATCTTTGGAACAATGATTCTGGAATGGAGCTAATTGACTCAGAATTGGATGATATCTCCAACAAGCATTTAGTACCAAGATACGTGAATATCGGACTTCTCTGTGTTCAACAAAGTCCGGAAGATAGGCCAACCATGTCTGATGTTGTATCAATGATTGGTAATGACACTGCATCCCTTCCGATTCCAAAGCCACCAGCATTTCAAAACGTGAGAGGTATTGAATATTCAAGACTCTCAAAAAGCATAGAAGGAAACATTTCTCTGAATGGCATCACAGATTCACTCATTGAAGCAAGATGA 1077 0.3872 MSMKVNKDSDIADNKSIKVRRKEVKLPLFSFASVSAATNNFSDANKLGEGGFGPVYKGILLNGDEVAVKRLSRRSGQGWEELRNEALLIAKLQHNNLVRLLGCCIERDEKMLIYEFMPNKSLDCFLFDAIKRRMLDWGTRVRIIEGIAQGLLYLHQYSRFRIIHRDLKASNILLDTNMNPKISDFGMARIFGENELQANTNRIVGTYGYMSPEYAMEGLFSVKSDVFSFGVLLLEIISGKKNTGFYQTSSFNLLGYAWDLWNNDSGMELIDSELDDISNKHLVPRYVNIGLLCVQQSPEDRPTMSDVVSMIGNDTASLPIPKPPAFQNVRGIEYSRLSKSIEGNISLNGITDSLIEAR* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1718 358 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 356 - -
Mtr8g1718 358 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-7 1 356 - -
Mtr8g1718 358 Pfam Protein tyrosine and serine/threonine kinase 45 310 IPR001245 GO:0004672|GO:0006468
Mtr8g1718 358 CDD STKc_IRAK 47 311 - -
Mtr8g1718 358 SUPERFAMILY Protein kinase-like (PK-like) 26 327 IPR011009 -
Mtr8g1718 358 Gene3D Phosphorylase Kinase; domain 1 2 116 - -
Mtr8g1718 358 SMART serkin_6 41 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1718 358 Gene3D Transferase(Phosphotransferase) domain 1 117 318 - -
Mtr8g1718 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Mtr8g1718 358 ProSiteProfiles Protein kinase domain profile. 41 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1718 Mtr-Chr8 25425830 25427847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1718 4 326 Receptor kinase-like Gene Family AT4G23190 57.798 3.48e-132 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g1718 PK_Tyr_Ser-Thr 9.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1718 - - mtr:MTR_8g061110 624.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1718 8 25425830 25427847 Mtr8g1718 8 25425830 25427847 ECH