Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1716 ATGGCACTGGGTTCTACAATTATTACCTTGCTAATATTATCATTATTTTATTGCCGCAATTTACTTTGCATATATGCAACATCCTATAGAGAATTGCTAGTAGTGGGACAATTGATTAGAAATTCAGACACACTTGTTTCAAAGGGTGGGAACTACGAACTGGGATTTTTCACTCGAATCAGAGAGAACTCGACCAAGTACTATGTAGGTATATGGTTCAAAAAGGTAGCAAATGACAAGATTGTTTGGGTTGCCAACAGAGACAACGCATTTCAAACATCCTCGGTGTTTCTTACCATTGACCATGATGGTAATATTGTAATCATAGATGGAGATATGATGTCCTACGTGACTGGTGCTCCAAACAGCAGCAACAATAGCATTAGGAATAGTACCTACGCAACCCTCTTGGACACAGGAAACTTGGTACTGGTGAATAATTCTAACCAAGCAATTTTATGGCAGAGTTTTGATCACCCCACAGATACCCTTTTGCCTGGAATGAACATAGGCTACGATACTGACACAGGACACACTTGGTCATTGAGATCATGGAAGAGTACAGACGACCCCTCTTCAGGACCATATACCCTTCAATATGATTCTCGCTCTGCGAATCTGTCTGTTAGTAAAGGTTCAAATGTTTTGTGGATTGACGGTAATTCCAATTTTTCTTTTCATGATGTTTTGAACCGAGCGGAGTTCAAACAGAGCTACGGCTTGAACAACTATACTACTATTCCAATTGATAGCACTTCTCGCTTTATACTAGAAGCGTCTGGGGATCTTAAATACCAAGCCTGGTATGAGGAATCTAAGCAATGGATTTTTCTACGGTCATCAACGTGTGTGACAAACAATTCATGTGGATTTTTTTCCATTTGTAATCCGCAAACTCCTGACCCTTGTCAATGTCTCAGAGGTTTTAAACAGTCTAGTGCTGGTGGATGTGTTAGGATAAAGAAGTTGTCCTGCAACAACAATAACATTAAACATGGATATTTCTCATCCTTTAATATGTCAGTGAAATCACTTCGACGTCATCGTGTGCACAGGCTGGTGGATACCGGAGCACAGTGTAATTATACTTGCTTCAATGATTGCTCTTGTGTTGCTTATGCTTATGATTTTTTTGACGGTGCCTGCATGTTATGGAATGATCAAGTACCGACTCTAACCATCACATCAACCGGGGATTCTTATAAAAATATTGATAATTATAACCTAACGTTTCATCTCAGAGTTGCTGGCTCGGACAAACGTAATCCAAATTCTAATGCAATTGGAAGACATGGAAACGGGAAGAGGAATCTACTTGTAATTGTTATTTTGATCTCATTTCTACTATTTCTTGTACTGGTTTGCCTATTTGTTTACCGGACTAGAAAGCAAAGTGGGGAAGGTGATGATTTGCTCAATTTTCAAGTAGGCATGAGCATGAAAGTTAATAAAGACTCAGACATTGCAGACAAGAGTATAAAAGTAAGGAGGAAAGAAGTCAAGTTGCCATTATTCAGTTTTGCAAGTGTTTCAGCAGCGACTAATAACTTTTCAGATACAAACAAGCTTGGTGAAGGTGGCTTTGGACCTGTTTATAAGGGCATACTATTGAATGGGGATGAGGTTGCTGTGAAAAGGCTATCCCGAAGATCCGGTCAAGGATGGGAGGAATTAAGAAATGAAGCATTGTTGATTGCAAAACTCCAGCATAATAATCTTGTTAGACTTCTCGGCTGTTGCATTGATCGAGATGAAAAAATGCTTATTTATGAATTCATGCCCAATAAAAGCTTGGACTGTTTTCTCTTCGAAGCTGTAAAAAGAAGGATGCTAGATTGGGGATCACGGGTTCGAATAATTGAAGGAATTGCCCAAGGACTACTTTATCTGCATCAATATTCGAGGTTCCGGATCATTCATCGAGATTTAAAAGCTAGTAACATATTGTTAGACGCCAACATGAATCCTAAAATTTCAGATTTTGGAATGGCTAGGATATTTGGTGAGAATGAGCTTCAAGCAAATACAAATCGGATTGTTGGAACTTATGGCTACATGTCTCCTGAATATGCTATGGAAGGCCTTTTCTCAGTTAAATCCGACGTCTTCAGCTTTGGAGTGCTTTTGTTAGAGATTATAAGTGGCAAGAAGAATACTGGTTTTTATCAAACAAGCTCTTTCAATCTTCTTGGATATGCTTGGGATCTTTGGACCAACGATTCTGGAATGGAGCTAATTGATTCAGAATTGGATGATATATCCAACAAGCATTTAGTACTAAGATACGTGAATATCGGACTTCTCTGTGTTCAACAAAGTCCGGATGATAGGCCAACCATGTCTGATGTTGTATCAATGTTTGGTAATGACACTGCATCGCTTCCGATTCCAAAGCCACCAGCATTTCAAAATGTGAGAGGCATTAAAAGTTCAAGACTCTCAAAAAGCATAGAAGGAAACATTTCTGTGAATGGCATCACAGATTCAGTCATTGAAGCAAGATGA 2505 0.39 MALGSTIITLLILSLFYCRNLLCIYATSYRELLVVGQLIRNSDTLVSKGGNYELGFFTRIRENSTKYYVGIWFKKVANDKIVWVANRDNAFQTSSVFLTIDHDGNIVIIDGDMMSYVTGAPNSSNNSIRNSTYATLLDTGNLVLVNNSNQAILWQSFDHPTDTLLPGMNIGYDTDTGHTWSLRSWKSTDDPSSGPYTLQYDSRSANLSVSKGSNVLWIDGNSNFSFHDVLNRAEFKQSYGLNNYTTIPIDSTSRFILEASGDLKYQAWYEESKQWIFLRSSTCVTNNSCGFFSICNPQTPDPCQCLRGFKQSSAGGCVRIKKLSCNNNNIKHGYFSSFNMSVKSLRRHRVHRLVDTGAQCNYTCFNDCSCVAYAYDFFDGACMLWNDQVPTLTITSTGDSYKNIDNYNLTFHLRVAGSDKRNPNSNAIGRHGNGKRNLLVIVILISFLLFLVLVCLFVYRTRKQSGEGDDLLNFQVGMSMKVNKDSDIADKSIKVRRKEVKLPLFSFASVSAATNNFSDTNKLGEGGFGPVYKGILLNGDEVAVKRLSRRSGQGWEELRNEALLIAKLQHNNLVRLLGCCIDRDEKMLIYEFMPNKSLDCFLFEAVKRRMLDWGSRVRIIEGIAQGLLYLHQYSRFRIIHRDLKASNILLDANMNPKISDFGMARIFGENELQANTNRIVGTYGYMSPEYAMEGLFSVKSDVFSFGVLLLEIISGKKNTGFYQTSSFNLLGYAWDLWTNDSGMELIDSELDDISNKHLVLRYVNIGLLCVQQSPDDRPTMSDVVSMFGNDTASLPIPKPPAFQNVRGIKSSRLSKSIEGNISVNGITDSVIEAR* 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1716 834 Pfam S-locus glycoprotein domain 244 312 IPR000858 GO:0048544
Mtr8g1716 834 Gene3D Transferase(Phosphotransferase) domain 1 593 793 - -
Mtr8g1716 834 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 191 IPR036426 -
Mtr8g1716 834 PIRSF SRK 3 834 IPR024171 GO:0004674
Mtr8g1716 834 Pfam PAN-like domain 355 388 IPR003609 -
Mtr8g1716 834 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 37 832 - -
Mtr8g1716 834 Pfam D-mannose binding lectin 81 186 IPR001480 -
Mtr8g1716 834 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-7 37 832 - -
Mtr8g1716 834 Pfam Domain of unknown function (DUF3403) 789 834 IPR021820 GO:0004674
Mtr8g1716 834 Gene3D - 24 158 IPR036426 -
Mtr8g1716 834 ProSiteProfiles PAN/Apple domain profile. 325 408 IPR003609 -
Mtr8g1716 834 SMART serkin_6 517 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1716 834 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Mtr8g1716 834 CDD STKc_IRAK 523 787 - -
Mtr8g1716 834 Pfam Protein tyrosine and serine/threonine kinase 520 786 IPR001245 GO:0004672|GO:0006468
Mtr8g1716 834 ProSiteProfiles Bulb-type lectin domain profile. 30 157 IPR001480 -
Mtr8g1716 834 CDD B_lectin 37 160 IPR001480 -
Mtr8g1716 834 Gene3D Phosphorylase Kinase; domain 1 491 592 - -
Mtr8g1716 834 SMART blect_4 36 160 IPR001480 -
Mtr8g1716 834 ProSiteProfiles Protein kinase domain profile. 517 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1716 834 SUPERFAMILY Protein kinase-like (PK-like) 502 803 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1716 Mtr-Chr8 25414252 25420509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1716 423 816 Receptor kinase-like Gene Family AT4G05200 51.244 5.31e-126 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g1716 PK_Tyr_Ser-Thr 4.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1716 - - mtr:MTR_8g061110 1004.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1716 8 25414252 25420509 Mtr8g1716 8 25414252 25420509 ECH