Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1708 ATGGCGGATGTTGCAATTTCGATCGTGGCTACTGTGGTTGAACGTTTGGTGGGACCAGCAATACGCGAAGGAAAATGTGTTCTTTGTGTTAATAAGTTCATTGGCGATCTTGAGAATGAAAAGAAGGAGCTGGTATTCGAAAGAGATAACTTGTTGGTTCGTGTTGAACAAGCCAAACATAGAACCGAAGAAATTGAGATACCAGTGGGAAAATGGATAGATAATGTGAATAATCTACTGGAAGAGGTGGACGATTTGGAACAAAGGATGAGAGAAAATACTAGTTGCTTTCAAGGGCGGTGTCCAACTTGGAAAAGATATCGATTATGCAAGCAAACGGTAAAGAAGATAGAGGCGATACGAAAATTCAAAGGCACAAGCAATATTAAGCCGTTTTCTCACCGCGCTCCTCTTCCTGGCATAAAACTCCAATCATCAGAGGATTTTACTTATTTTGAATCAACAAAAGTGGCTAGCAGTCAACTACTGGAGGCACTTCGAGACGAGGACATCTACATGATAGGAGTGTATGGAATGGGCGGAACTGGGAAAACAGCTCTTGTTACTGAAGTTGGTAAGAAGGTTGAAGCATCAAATGTTTTTGACAAGACTATATTAATTACAGTGTCTCAAACTCCCAATATTAGAGATATTCAAGGAAAAATAGCTGATGTTTTGAACATGAAATTGGAGGAAGAAAGTGATGAGGGAAGAGCACAACGTTTGTGGTTGAGTTTGAAAGAAAAGAAGCGGATTCTCGTAATAGTAGATGATTTATGGAGAGAGTTTGATTTGAACGATGTAGGGATTCGCTTAGACAATGATAACAAGGGTGCATGGAAGATCCTTGCAACCACTCGTAATCAACATGTATGTGATCTGATGCACTGTCAAAAGAAGATTCATCTAGGACTCTTAGATGAAGATGAGTCTTGGTCTTTGTTCCGAAAACATGCACATATTGATGAAAATTTCCCCAAGTCATTAGATGGTGTGCCACAAAAAGTATGCATGGAATGTAAAGGACTACCTATAGCAATTAAAGCGGTTGGATCTTCTTTAAAAGGAAAATCCAATGCTGAATGGAAGGTTGCATTTCACAGATTGAGAAATTCAGAGACCATTGATGATAAAGAGGAAGGAGTGGGAGTTGCTTTAAGTTGTCTTAAACTAAGCTATGATTATTTATCAAACAAAGAAAAACTTGTCTTCTTAATGTGTTCTATGTTTCCTGAAGATTATAAAATCTCAGTAGAAGACATGATCCGATATGCGGTAGGGCTTGGACTAGGACAAGGATTTTCGTTAGAGTCGGCAAGAGATGAGATCGAAGCAATGATAAACAGACTTTTGGAATCATGTTTGTTGATGCATACTGGGGAAAGCAAAGAGTACGTGAAGATGCATGACACAGTTCGTGACACAGCCTTATGGATTGCAAAGAGATCAGACAATAACAAAATTGTGGTAAATGTTGACAAACCAATTAGCACTTTGGAAATGGATGATAGTATAAGAGATTGTTTTGCTCTATCCTCATGGTATTTGGAGCAAGATAAAAAATTTCATCAATTGCATGCTCCAAACCTTGAAATTCTATTGCTACATTCTAGGAGGTGGAGGTGGAAGTGCTTTGATTTATCGCGTGCAACCTTTCAAGGAATAAAAGGGCTGAAGGTTTTTTCTCTAATCAATAATGCCTACGGTAATCCTCCATTATACTTGCCTTCTTCAACACATTCATTGACAAATCTTCGAACTCTACGCTTGAATGGATTTAAGAACTTAGGTAACACTTCTTTCTTAGGAAGCTTAACGAGACTTGAGGTTCTTGACCTGCAACATTGTATCCTCGAAGAACTTCCTAATGAAATAGGAAAGCTCGAACGATTGAAGCTTCTAGATTTGTCATTTTGTGTCTTTCTTCAAGAAAACTATAATGGAGCAATAGGGAAATGTTCACAGTTGGAAGAGTTATATGCTTCTAAATGCATGCCAAAAGAGTACATTTGCCAGTGTGTTATGGACATTATTACTCTCCCAATGCTGCAAAGGTTTGTTATATGTACCGACCTTAATAGAGATTTTGCAAAAACCTCGAGACATTTAGAAGTAATGGATTTTAATATCTCCAACTTGAAGGATTCTAAAAAGAATCTTCTTCAAATGGCCGAAACAATTCATTTGATACATCTTCATGGAGGATGTAAAAATATTATCCAAGACATGATTAAAGTTATGAGAGGTACGAGTTGTTTTACATCTCTCTGTCTTGAGGGTTGTCCAGAGATAGAATACATCGTCAATACAACCTCTGATTCTGAGGTTGCGTTTTTGGTTCCTAAGTTGGTTGAATTAGTACTGTTGGAATTGGAAAACTTGGAAGAACTGTGTCGTGGTCCACCTCAGCAAGTTCTAAGCTTCTTTGAGAGATTAGAAAAACTTGAAATACAACAGTGCTTGAAGTTGCACAACATATTTCCACAGGAATGTAACTTACAAAATCTTAAAATCCTCAAAATAACAAACAGCATGTTCGGTGAAGCTCTCTTCTCGATTTCTGTTGCTCAAAGTCTACAACAACTAGAAGTGCTAGAAGTATCACAGTGCGATGAATTGAAGCTTATAATCGCCATTGGAAGCGAGCATGGTTCTAATTCAGGCAATGAAATATTTCAGACTGATCTAAAGGGTTCACATTTTGTGATGTCTAGATTGAAGAAACTTCAAATTTCTAATTGTAGGAAGTTAGAGTCAATATTACCAATATGTTGTGTTGAAGGACTGGCACCACTGGAAGAGATAGAAATAATTCAAGCTCCTCAGTTGAAACTTGTATTTGGAGAATGTGATCACCAAAATCATCCGTCTCACCAATACCGGAACAAGAACTTGCATCCTCATTTGAAACGTCTCAAACTTACAGATCTTGATAATCTCATTGGGATATGCCCTGAAAAAAATTGTGAAAATTGGCCGTCTTCCATAGTGCTAATTGTGGAGAAATGTCCAAAGTTGAGTGCATCATGGATCGCTACGTTAGCCGGCTCTGACGATGGAGAAAAAGTTTTCAAGGTAGCGAAAATGACCTTAAGAGGTTTTTCTGAATTGAGCCGCATATCAAGAGTAGGTCCTTCTCCAAGACATATTTTGAGTCTCCATTGTCTTCAAAGTTTAGCAGTGAGCAGTTGTAAAAACTTGAGATCTTTATTCTCAATGGAGATACATAAAAGCTTACCAGAGTTGACATCGTTTCGAGTATACAACTGCGACGAATTAGAACAAATCATTGAAGAAAATGAAGAGCTTGTGTCCAACACTGAAGTGTGTTTTCCAAAGCTAACAGATATAAGGATTGTAAATTGCAAAAAAATGAAAAGCCTTTTCTCTGTTGCTATGATTAGAATGCTTCCAAAGCTAAGCACTCTTGAAATATCCGAGGTCACTCAACTAGAAGAAGTTTTTAAGGGAGAGAATACCATCAATGATATTGAAATTGAGCTTGTAAACTTGTCATCAATACAACTGCATAAGCTGCCGTGTTTTGTTGATATCTGCAAAGGTTTTAAGCTACGGACTGCGAAAATTAAACATGTTGACATAGTTGAATGTCCTAAAATTGCTCCAAGTTTGAGAGAAATTCAGCTAGAAGAATCAGGAGACAGAAGCAGGAAATGA 3678 0.3768 MADVAISIVATVVERLVGPAIREGKCVLCVNKFIGDLENEKKELVFERDNLLVRVEQAKHRTEEIEIPVGKWIDNVNNLLEEVDDLEQRMRENTSCFQGRCPTWKRYRLCKQTVKKIEAIRKFKGTSNIKPFSHRAPLPGIKLQSSEDFTYFESTKVASSQLLEALRDEDIYMIGVYGMGGTGKTALVTEVGKKVEASNVFDKTILITVSQTPNIRDIQGKIADVLNMKLEEESDEGRAQRLWLSLKEKKRILVIVDDLWREFDLNDVGIRLDNDNKGAWKILATTRNQHVCDLMHCQKKIHLGLLDEDESWSLFRKHAHIDENFPKSLDGVPQKVCMECKGLPIAIKAVGSSLKGKSNAEWKVAFHRLRNSETIDDKEEGVGVALSCLKLSYDYLSNKEKLVFLMCSMFPEDYKISVEDMIRYAVGLGLGQGFSLESARDEIEAMINRLLESCLLMHTGESKEYVKMHDTVRDTALWIAKRSDNNKIVVNVDKPISTLEMDDSIRDCFALSSWYLEQDKKFHQLHAPNLEILLLHSRRWRWKCFDLSRATFQGIKGLKVFSLINNAYGNPPLYLPSSTHSLTNLRTLRLNGFKNLGNTSFLGSLTRLEVLDLQHCILEELPNEIGKLERLKLLDLSFCVFLQENYNGAIGKCSQLEELYASKCMPKEYICQCVMDIITLPMLQRFVICTDLNRDFAKTSRHLEVMDFNISNLKDSKKNLLQMAETIHLIHLHGGCKNIIQDMIKVMRGTSCFTSLCLEGCPEIEYIVNTTSDSEVAFLVPKLVELVLLELENLEELCRGPPQQVLSFFERLEKLEIQQCLKLHNIFPQECNLQNLKILKITNSMFGEALFSISVAQSLQQLEVLEVSQCDELKLIIAIGSEHGSNSGNEIFQTDLKGSHFVMSRLKKLQISNCRKLESILPICCVEGLAPLEEIEIIQAPQLKLVFGECDHQNHPSHQYRNKNLHPHLKRLKLTDLDNLIGICPEKNCENWPSSIVLIVEKCPKLSASWIATLAGSDDGEKVFKVAKMTLRGFSELSRISRVGPSPRHILSLHCLQSLAVSSCKNLRSLFSMEIHKSLPELTSFRVYNCDELEQIIEENEELVSNTEVCFPKLTDIRIVNCKKMKSLFSVAMIRMLPKLSTLEISEVTQLEEVFKGENTINDIEIELVNLSSIQLHKLPCFVDICKGFKLRTAKIKHVDIVECPKIAPSLREIQLEESGDRSRK* 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1708 1225 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 831 1103 - -
Mtr8g1708 1225 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 6 662 - -
Mtr8g1708 1225 Gene3D - 142 302 IPR027417 -
Mtr8g1708 1225 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 407 IPR027417 -
Mtr8g1708 1225 SUPERFAMILY L domain-like 467 1153 - -
Mtr8g1708 1225 PANTHER - 6 662 - -
Mtr8g1708 1225 PANTHER - 831 1103 - -
Mtr8g1708 1225 Pfam NB-ARC domain 162 394 IPR002182 GO:0043531
Mtr8g1708 1225 Gene3D - 392 477 IPR036388 -
Mtr8g1708 1225 Gene3D - 305 391 IPR042197 -
Mtr8g1708 1225 Gene3D Ribonuclease Inhibitor 1036 1219 IPR032675 -
Mtr8g1708 1225 Coils Coil 69 96 - -
Mtr8g1708 1225 PRINTS Disease resistance protein signature 173 188 - -
Mtr8g1708 1225 PRINTS Disease resistance protein signature 246 260 - -
Mtr8g1708 1225 PRINTS Disease resistance protein signature 340 354 - -
Mtr8g1708 1225 PRINTS Disease resistance protein signature 626 642 - -
Mtr8g1708 1225 Gene3D Ribonuclease Inhibitor 517 938 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1708 Mtr-Chr8 25261925 25267338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1708 170 640 WRKY Transcription Factor Family AT5G45050 25.000 1.15e-12 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1708 - - cam:101506740 1233.78