Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1700 ATGAAAAAAATGGTCAATCTTTTGTCTGGTCTCTTTCTTTTTTTGCTCTCAATGCATTGTTTCGTTGCTTGCTTAGCTTCAAATACAAAAAACATCACTACAGATAAATATGCTCTTCTAGCATTCAAATCACTTATTACTTCAGATCCCTATGATATTTTGGCTAATAATTGGTCAACATCCTCTCCTATATGCAGTTGGGTTGGTGTAACTTGTGATGAACGACACAATAGAGTCTATGGTTTGAATCTCACAAACATGAACCTTAGAGGTACTATTTCCCCGAGCATTGGGAATATGTCGTTTCTTGTTATACTTGACCTCCACAACAATAGCTTTGGTGGTCAAATGCCTAAAGAGATATGTTGGTTGCGCCGGTTAAAGTTTCTTCGTTTTAGCATGAACAAGTTTGTTGGAGAAATTCCTGCAGCGTTGGGGGAATTATCGCAACTTCAATATTTACGTCTTGGAATTAACAATTTTAATGGTTCTATTCCCCAATCTATTGGTAACCTTCGTCGGTTGAAATTGTTTACCGTTGTTAAAAACATGTTCTCTGGATTGATACCTCAAACAATTTCAAATATGTCTTCACTTGAATATGTCGGCTTCTCTTCTAACTACTTTTCAGGAAACATCCCACCATCAATTGGAAACTGCACATCCTTGATAGACGTATTTTTAGATACGAACTTTTTCACAGGTTCGATACCAAAGGAGATTGGCTATCTTGATAAACTTGAAATTCTTATATTAGCAGAAAATAGCTTCAGTGGATCTATTCCTTCCAACCTCATGAACATGTCATCATTGAAACAATTGGAGTTTGAGCAAAATTACCTCTCAGGAATTATTCCATCAAAAACAGGATATAACCTTCCTAACCTACAATATCTACACTTGAATAACAACAATTTTGTTGGAAATATTCCAAATAGCATATTCAATTCTTCTAATCTCATTGGATTTCAATTGCATTCCAATGCATTTAGTGGAACTCTACCCAATATTGCTTTTGGAGGTTTAAGGTTCCTCAAAACAATTTTCATACAGGACAACAACTTGATAATAGAAGATTCTCTTCAGTTCTTTACTTCCTTGACGAATTGTAGATATTTAAATATTCTAGACTTATCAGGAAATCATATACTATCCAATCTTCCTAAGTCAATCGGAAACATAACTTTAATGTACTTTTTGGCAGATTCATGTGGAATTGATGGTAATATTCCTCTAGAGGTTGGAAACATGAGTAACTTGCTATCTTTTTCTGTGAATGGGAATAATATAAATGGATCAATACCTGGCACATTTAAAGATTTACATAAACTTCAGGGATTGGATCTTAGAAACAATGGACTACAAGGATCATTTGTTAAGGAGCTTTGTCAAATTGACAATTTGGATGAGTTGTATTTAGAAAGTAATAAGCTTTTTGGTGTTTTACCAACATGTTTGGGAAACATGACTTCTCTAAGAAAATTATACATAGGATATAACAATTTGAACTCTACGATACCTTCCTCTCTTTGGAGTCTCAGAGATATCTTACAAGTAGATTTGTCCTCTAATGCTTTCATTGGTAATATTCCACTTGAGATTGGAAATTTCAAAGCAATTATACTATTAGACCTATCTAGAAATCATATATCAAGCAACATACCTACATCCATCAGTTCCTTAAGAAATTTGCAAAATCTGTCCTTAGCTCATAACAAATTGTATGGAGAAATTCCCACATCACTTGGTGAAATGATTAACTTGTTCTCTTTGGACTTGTCCCAAAATATGATAACTGGTGTTATTCCAAAATCCTTAGCATCGCTTTTGTATCTTCGAAACATCAATTTATCATATAATAGACTACAAGGAGAGATTCCTGATGGTGGACCTTTCAAAAATTTCACAGCTGAATCATATTTGCATAATGAAGCACTTTGTGGCGATCCTCGCCTACAAGTCCCTCTGTGTGATAAACAAGCTAAAAAAATGTCAATGAAAAAGAATCTATTACTCAAATGCATACTTCCCATACTTGTGTCAACCATTTTTGTTGTTGCATGCATAATACTTGTAAAACTTAATAAAAGGAAAATGGTTGAAAATACTCTTGAAAGAAATTTATCAACTCTTGGAGCTCCAAGAAGAATTTCTTATTATGAGCTTGTGCAAGCAACAAATGGATTTAATGAGAGTAATTTGCTTGGAAGGGGAGGATTTGGGTCTGTGTATGAGGGGAAGCTTTCAAATGGTGAGATATTTGCGGTTAAAGTGATTGATTTGAACTCGGAGGAAAAATTACGGAGCTTTGATCGAGAATGCAATGCATTGAGAAATCTACGGCATCGAAATCTGGTTAAGATTATCAGCAGTTGTTCAAATATTGATTTCAAAGCATTGGTGATGGAGTTCATGTCAAATGGAAGTGTGGAAAAATGGTTATATTCAAATAATTGTTGTTTAAATTTCTTGCAAAGGTTAAATATAATGATAGATGTTGCATATGCATTGGAATATCTCCATCATGGTTCTTCAATACCTGTGGTCCATTGTGATCTAAAGCCTAGTAATGTCTTGCTGGACGAAGATATGGTTGCACATGTTAGTGATTTTGGTATTGCCAAACTCATGGATGAAGGACAATCTAAAACTCATACAGAGACTTTGGCTACTATTGGATATCTTGCACCAGAGTACGGAACTAAAGGAATTGTTTCTATCAAAGGAGATGTATACAGCTATGGGATTATGCTAATGGAAATCTTTACAAGAAGAAAGCCAACAGATGATATGTTTGTAGAAGACCTAACTTTGAAGACATGGATCAGTGAATCATTGCCTAATTCAATTATGGATGTCTTGGATTCTAGGTTAGTCCAACAAAATGGGGGGAAAATTGATGACATATTGAGTTGCATGTCATCTATTTTTGGTTTAGCCCTGAATTGTTGCAAAGATTCACCTGAAGAAAGAATTAATATGGAAGATGTTATCAAGATGCTAATCAAAATCAAGACTATGGTTCTTGATGAAAACATGGTCTAG 3045 0.3445 MKKMVNLLSGLFLFLLSMHCFVACLASNTKNITTDKYALLAFKSLITSDPYDILANNWSTSSPICSWVGVTCDERHNRVYGLNLTNMNLRGTISPSIGNMSFLVILDLHNNSFGGQMPKEICWLRRLKFLRFSMNKFVGEIPAALGELSQLQYLRLGINNFNGSIPQSIGNLRRLKLFTVVKNMFSGLIPQTISNMSSLEYVGFSSNYFSGNIPPSIGNCTSLIDVFLDTNFFTGSIPKEIGYLDKLEILILAENSFSGSIPSNLMNMSSLKQLEFEQNYLSGIIPSKTGYNLPNLQYLHLNNNNFVGNIPNSIFNSSNLIGFQLHSNAFSGTLPNIAFGGLRFLKTIFIQDNNLIIEDSLQFFTSLTNCRYLNILDLSGNHILSNLPKSIGNITLMYFLADSCGIDGNIPLEVGNMSNLLSFSVNGNNINGSIPGTFKDLHKLQGLDLRNNGLQGSFVKELCQIDNLDELYLESNKLFGVLPTCLGNMTSLRKLYIGYNNLNSTIPSSLWSLRDILQVDLSSNAFIGNIPLEIGNFKAIILLDLSRNHISSNIPTSISSLRNLQNLSLAHNKLYGEIPTSLGEMINLFSLDLSQNMITGVIPKSLASLLYLRNINLSYNRLQGEIPDGGPFKNFTAESYLHNEALCGDPRLQVPLCDKQAKKMSMKKNLLLKCILPILVSTIFVVACIILVKLNKRKMVENTLERNLSTLGAPRRISYYELVQATNGFNESNLLGRGGFGSVYEGKLSNGEIFAVKVIDLNSEEKLRSFDRECNALRNLRHRNLVKIISSCSNIDFKALVMEFMSNGSVEKWLYSNNCCLNFLQRLNIMIDVAYALEYLHHGSSIPVVHCDLKPSNVLLDEDMVAHVSDFGIAKLMDEGQSKTHTETLATIGYLAPEYGTKGIVSIKGDVYSYGIMLMEIFTRRKPTDDMFVEDLTLKTWISESLPNSIMDVLDSRLVQQNGGKIDDILSCMSSIFGLALNCCKDSPEERINMEDVIKMLIKIKTMVLDENMV* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1700 1014 SUPERFAMILY RNI-like 292 627 - -
Mtr8g1700 1014 SUPERFAMILY L domain-like 34 287 - -
Mtr8g1700 1014 Pfam Protein kinase domain 730 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1700 1014 Gene3D Ribonuclease Inhibitor 187 291 IPR032675 -
Mtr8g1700 1014 CDD STKc_IRAK 735 1004 - -
Mtr8g1700 1014 Gene3D Ribonuclease Inhibitor 31 186 IPR032675 -
Mtr8g1700 1014 ProSitePatterns Protein kinases ATP-binding region signature. 735 757 IPR017441 GO:0005524
Mtr8g1700 1014 SMART serkin_6 729 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1700 1014 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Mtr8g1700 1014 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 135 215 - -
Mtr8g1700 1014 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 11 150 - -
Mtr8g1700 1014 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 202 1010 - -
Mtr8g1700 1014 SMART LRR_typ_2 100 124 IPR003591 -
Mtr8g1700 1014 SMART LRR_typ_2 561 585 IPR003591 -
Mtr8g1700 1014 SMART LRR_typ_2 489 513 IPR003591 -
Mtr8g1700 1014 SMART LRR_typ_2 148 172 IPR003591 -
Mtr8g1700 1014 SMART LRR_typ_2 293 317 IPR003591 -
Mtr8g1700 1014 SMART LRR_typ_2 465 488 IPR003591 -
Mtr8g1700 1014 SMART LRR_typ_2 417 440 IPR003591 -
Mtr8g1700 1014 SMART LRR_typ_2 244 268 IPR003591 -
Mtr8g1700 1014 Gene3D Transferase(Phosphotransferase) domain 1 805 1012 - -
Mtr8g1700 1014 Gene3D Ribonuclease Inhibitor 339 665 IPR032675 -
Mtr8g1700 1014 Pfam Leucine rich repeat 467 525 IPR001611 GO:0005515
Mtr8g1700 1014 Gene3D Phosphorylase Kinase; domain 1 712 804 - -
Mtr8g1700 1014 ProSiteProfiles Protein kinase domain profile. 729 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1700 1014 SUPERFAMILY Protein kinase-like (PK-like) 709 1002 IPR011009 -
Mtr8g1700 1014 Gene3D Ribonuclease Inhibitor 292 338 IPR032675 -
Mtr8g1700 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 848 860 IPR008271 GO:0004672|GO:0006468
Mtr8g1700 1014 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 135 215 - -
Mtr8g1700 1014 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 202 1010 - -
Mtr8g1700 1014 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 11 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1700 Mtr-Chr8 25131545 25153073 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1700 34 1005 Receptor kinase-like Gene Family AT3G47570 37.288 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr8g1700 Pkinase 7.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1700 - K13420 mtr:MTR_8g465340 1224.15