Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1698 ATGGCCACCACAACAACAGAACAAGACACCTCAAGTGCTTTACACATGCACGACACTGCAACCGACGACGCAACTGAGGACAGTGAGCCGGAGAACTACCTAGACGACGAAGATGATGACGAGGAAGAAGAGCAGCAACCGGTGAATTATAGAAGGTCAATATCTTCAACAAGTATCAGTGGAGCTGTGGACCCAAGAGCAAAGTGGGTGCAAGAATGGAATAGAGTTTTCTTGCTAGTATGTGCAGCAGGGTTGTTTGTGGATCCACTTTTCTTCTATGCTCTTTCCATCAGTGATTCATGTATGTGTCTTTTCATCGATGGATGGTTCGCAGTCACTGTAACGGTGCTCCGTTGCATGACTGATGCTTTGCACTTTTGGAATATTTTCCTCCGCTTCAAGACGGCGAAACGCAGCTCACTTACATTTGCCAGCCATTCGGCCACCGCGGATGGCCGCCGCTTGGTCGCTCTTGCTTATCTTAAGTCCCGCCGTGGCTTCTTCTTTGACCTCTTTGTTATTCTTCCTATACCTCAGATTGTGCTTTGGGTGGCTATTCCTTCTTTGTTGGAGCAAGGTTCAGTTACATTGGTGATGACAATATTTTTAATTGTATTTCTGTTCCAATATCTTCCCAAAATTTATCACTCAGTATGCCATTTGCGACGGACACAAAACCTATCTGGCTACATTTTTGGAACTGTTTGGTGGGGTATTGCCCTTAACATGATTGCGTATTTTGTTGCTTCCCATGCTGCAGGGGCATGTTGGTACTTATTGGGGATCCAAAGAGCATCCAAATGTCTGAAAGAGCAATGTTATAAAACAAATGGTTGTGGCATGAATCTCCTTTCTTGTCATAAGCCAATGTATTATGGAAGTACAAGTTTGTTGAACAAAGATATGGCAAGAATGGCATGGGCAGGGAATAGGGAAGCAAGGTCTACATGCTTAAATAGTCCTGATAGCTTCAATTATGGAGCTTATAAATGGACTGTTCAACTTTTCACTAATGAGAACCGATTAGAAAAAGTACTTTTCCCAATCTTCTGGGGCTTAATGACTCTAAGCACTTTTGGAAACCTCGAGAGCACAACGGATTGGCTAGAAGTAGTTTTCAACATCATAATCTTGACTAGTGGACTTCTTCTAGTCACTATGTTGATCGGAAACATCAAGGTATTTTTGCATGCAACAACATCGAAGAAGCAAGTGATGCAATTGAGGATAAGAAATGTTGAATGGTGGATGAGGAAAAAGCATTTACCACAGGGGTTTCGACAACGTGTGCGTAACTACGAAAGACAACGTTGGGCTGCTATGCGTGGGGTTGATGAATGTGAAATGACCAAAAATCTTCCTGAAGGTTTAAGAAGAGACATTAAATACCATCTTTGTTTAGATTTGGTGAGACAGGTGCCATTGTTTCAACATATGGATGAGCTGGTTCTAGAGAACATATGTGACCGAGTGAAATCTCTAATATTCACTAAGGGAGAAACGATAGCAAGAGAAGGAGACCCAGTTCAAAGAATGTTATTTGTAGTGAGGGGTCATCTTCAAAGCAGCCAAGTATTAAGAGACGGATTGAAAAGTTGCTGCATGTTAGGACCAGGAAATTTCAGTGGTGACGAGCTCCTTTCATGGTGTTTGAGAAGACCTTTCATAGAGCGTCTTCCACTATCAACATCAACACTTGTCACACTTGAAACAACAGAGGCTTTTGGTCTTGAAGCTGAGGATGTGAAGTATGTCACACAACATTTCAGGTACACGTTTGTGAAGGAAAAGGTGAAGAGAAGTGCTAGGTATTACTCACCAGGGTGGAGAACTTGGGGTGCTGTGGCCATACAATTGGCATGGAGAAGGTACAGACATAGGTTAACTTTGAACTCATTGTCGTTTATAAGACCTAGAAGACCCTTGTCAAGATGTTCTTCATTGGGAGAAGATAGACTTCGACTCTACACAGCTTTGTTAACTTCACCAAAGCCTAATCAAGATGATTTCGACTTTTGA 2019 0.4245 MATTTTEQDTSSALHMHDTATDDATEDSEPENYLDDEDDDEEEEQQPVNYRRSISSTSISGAVDPRAKWVQEWNRVFLLVCAAGLFVDPLFFYALSISDSCMCLFIDGWFAVTVTVLRCMTDALHFWNIFLRFKTAKRSSLTFASHSATADGRRLVALAYLKSRRGFFFDLFVILPIPQIVLWVAIPSLLEQGSVTLVMTIFLIVFLFQYLPKIYHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHAAGACWYLLGIQRASKCLKEQCYKTNGCGMNLLSCHKPMYYGSTSLLNKDMARMAWAGNREARSTCLNSPDSFNYGAYKWTVQLFTNENRLEKVLFPIFWGLMTLSTFGNLESTTDWLEVVFNIIILTSGLLLVTMLIGNIKVFLHATTSKKQVMQLRIRNVEWWMRKKHLPQGFRQRVRNYERQRWAAMRGVDECEMTKNLPEGLRRDIKYHLCLDLVRQVPLFQHMDELVLENICDRVKSLIFTKGETIAREGDPVQRMLFVVRGHLQSSQVLRDGLKSCCMLGPGNFSGDELLSWCLRRPFIERLPLSTSTLVTLETTEAFGLEAEDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWGAVAIQLAWRRYRHRLTLNSLSFIRPRRPLSRCSSLGEDRLRLYTALLTSPKPNQDDFDF* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1698 672 CDD CAP_ED 475 581 IPR000595 -
Mtr8g1698 672 Gene3D Jelly Rolls 473 591 IPR014710 -
Mtr8g1698 672 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 15 669 - -
Mtr8g1698 672 Pfam Cyclic nucleotide-binding domain 496 583 IPR000595 -
Mtr8g1698 672 SUPERFAMILY cAMP-binding domain-like 401 589 IPR018490 -
Mtr8g1698 672 MobiDBLite consensus disorder prediction 1 18 - -
Mtr8g1698 672 ProSiteProfiles cAMP/cGMP binding motif profile. 475 554 IPR000595 -
Mtr8g1698 672 MobiDBLite consensus disorder prediction 1 51 - -
Mtr8g1698 672 SUPERFAMILY Voltage-gated potassium channels 65 396 - -
Mtr8g1698 672 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 15 669 - -
Mtr8g1698 672 Pfam Ion transport protein 73 392 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mtr8g1698 672 Gene3D Helix hairpin bin 400 466 - -
Mtr8g1698 672 MobiDBLite consensus disorder prediction 24 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1698 Mtr-Chr8 25085958 25101967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1698 63 671 Ion Channels AT5G54250 77.561 0.0 1000
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1698 K05391 - gmx:100783341 1109.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1698 8 25085958 25101967 Mtr8g1698 8 25085958 25101967 ECH