Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1696 ATGGTGTTATCAGCTTCGCCAAATTCTCTAACCAGAAGCTCATTAGAAGAAATGTTAGATTCGCTTCGTCGAAAAGACGAAGAAGAAAATGACAAAAACAAAGAATTGCCGCCTGCTTTGCCATCTCGCCCAGCCTCCAAGGCACGGCTGCCTCCCGCGAGGCGGTCGTTGCCGAATAATTTCAAAGTTGGGAGTGTAATGAATGACAATGTGGAAAGTAAGAGAAAGGAAATATCAATATTAACATCAACGTCGAGAAGAGAGAGTATGAGTAGTTTTGGAAGGAAGAGAGTGAAGAAAGATGCTTCTGTGGAGTCACCTTATGCGAAATTGGATTGTGATACTCTTTCTTATTTCATCAAAATGAAACTTCGTGTTTGGTGTAGGCAACCAAGAGGACAATGGGAGCTAGGGTCAATACAATCAACGTCAGGAGAAGAAGCATCTGTTTTATTTTCAAGTGGAAAAGTGCTGAAAGTGGCTAGATCAGAACTCGTACCAGCTAATCCTGACATTTTAGAGGTTGCAGACGACCTTATTAAACTGGCTTATTTGAATGAGCCATCGGTTCTTCACAATCTTAGGTTTAGATATTCTCGGGAGATGATTTATAGTAAAGCAGGGCCGGTTTTAATTGCACTCAATCCTTTCAAAGATCTCCAGATGTATGGAAATGATTATGTTTCCACTTATAGGCAGCGACTTGTTGATAGTCCTCATGTTTATGGTATTGCAGAAGCAGCTTATAACCAGATGATGAGAGATGAAGTAAATCAGTCCATTATAATAAGCGGTGAGAGTGGATCTGGGAAGACAGAGACAGCTAAAATTGCTATGCAATACTTAGCTGCTCTTGGCAGCGGCAGTTTTGGGAGAGCAAATGATGTTCTTCAGACAAATTGTATACTAGAAGCTTTTGGGAATGCAAAAACATCTGTGAATGACAACTCTAGCAGATTTGGAAAGTTTATTGAAATTCATTTCAGTGCAACGGGTAAAATATGTGGGGCTAACATTCAAACCTATTTGTTGGAAAAGTCAAGAGTTGTTCAATTGGCCAGTGGTGAGAGGTCGTATCACGTATTTTATCAACTTTGTGCTGGATCTCCATCTAGTCTTAAAGAGAGACTAAATCTTAAAGCAGCCTGTGAATATAAATATCTAAATCAAAGTGACTGCATGACAATTGGTGGTATTGATGATGCTAAAAACTTTCATCAGTTGATGAAAGCATTTGATGCTGTTCGAATTTTTAAAGAGGACCAAGAGATGATCTTTAAGATGCTTGCTACAATACTATGGCTGGGAAATATATCATTCAAAGTTACTGACAGTGAAAATCACATCGAGGTTGTGGGTGATGAAGCTATAACCAGTGCTGCCCTGCTGATGGATTGCAGTTCCCAGGATTTAATGTCAGCATTATCTAGCCAGAAAATCCAATCTGACCAGGATATTGTTTCCAAAAGTTTGACATTATTGCAGGCAATTGAAACAAGAGATGCAATTGCCAAATTTATTTATTCAAGCTTATTTGAATGGCTTGTACAACAAGTAAACAAGTCGCTTGAAGTGGGTGAAAACCATACTGAGAAATCCATTAGTATCCTTGATATTTGTGGGTTTCAGTCATTCCAGAAGAACAGCTTTGAACAGTTTTGTATAAATTATGCCAATGAGAGGCTTCAACAACATTTTTATCGGCATCTGTTTAAACTTGAGCAGGAGGACTGTGAATCAGACGGCATAGATTGTACAGTGTTAGATTTTGAGGACAACCAAGAGTGCTTGGATCTATTTGAGAAGAAACCTCTCAGTCTACTATCTTTGTTGGATGAGGAATCAAATTTCCCTGAGGCTTCTGATTTAACATTTGCCAACAAACTTAAGAATCTCCTGGATGCTAATCATTGCTTCAAAGAGGAAAGTGGCAGAGCTTTCAGTGTTCGTCACTATGCAGGGGAGGTTTTGTATGATACAAATGGCTTTCTAGAAAAGAACAGAGATACATTGTCTTCTAATTCCATTCAACTCCTTTCGTCAAGTAATTGTGAACTGCTGAAGTTATTCTCCGAAGTGTTTAACCAGTCTGAGGAGCATGGAAATTCCACTTTCCATGTTGGTGCAGCATACTCACAGAAGATAGGTATTGGGACAAAGTTCAAGGATCAATTGTTCAAGTTGATGCATCAGTTGGAGAGCACGACTCCTCACTTTATTCGCTGCATAAAGCCAAACACTAAGAAGCTTCCAGGAATTTATGACAACGAACTTGTCCTACAACAGCTCAGATGTTGTGGACTTCTAGAAGCTGTTAGAATTTCAAGGGCTGGGTATCCTACTCGAATTAAACATCAAGATTTTTCCAGAAGGTACGGGATTCTGCTTTCTGAGACTGATGTACCTCAGGATCCGTTGACCACCACAGTCGCAGTTTTGCAAAAATTTAATATCCCTTCTGAAATGTACCAAGTTGGCTACACAAAACTGTATCTTCGAGCAGGGCAGATTGGTGCACTGGAGGATAAGAGAAAACATTTTTTGCAAGCAACTGTTGGGATTCAAAAATGCTTCCGTGGTCATCAAGTCCGGAGTTATTTCTGTGAACTTAAGAATGGAGTGACAACATTACAATCATTTATTCGTGGAGAAGTTACAAGAAGGAAACATGGTGTTTTGACGAAATCTTCCATAACAGTTTATTCTAAAAAAATTGAGGAGATTCATGCAATCATATTACTTCAATCTGTGATTCGTGGGTGGAAGGTTCGTAGGGATTCTAGTAATATCAATAAATTAAGGAAATATCATGAAAATGCACAACCTAGACGGAAGTCTCGTGTTAAGATGCCAGAAGTTAAGCAGGATTTGTCCAACGAGCTGGTTCAAAATAGGCCTTCAGCTTTAGCAGAACTCCAAAAACGGGTGTACAGGGCTGAAGCAATTATTGAGCAAAAGGAAGACGAAAATACCGAATTGAAGGAAAAGTTAAAACAATCTGAAAGAAAAAGGATTGAATATGAAGCAAAGATGAAGTCAATGGAGGATGCATGGCAAAAGCAGATGGCATCCTTGCAAACGAGTCTTGCTGCTGCTAGAAAGAGCCTTGCTTCAGAGAATGGCACTGTTCAACCTGTAAGACATGATCTTGTGTCACCTCGTTACTATGATTCTGAAGATGCTACTTTATTGGGATCTCAAACCACTAATGGGAGCACACATATGAAGCTTTCTGGTAGTTTTTCGGTGTCTGATGCAGGGAGGCAGGCTAATGGTACTTTGACTACAGTGAGCAATCTGATGAAGGAATTTGAGCAGCGAAGACAAACCTTTAATGATGAAGTTAAAGCTTTGAATGAGGTTAAACCAGGGCAGTCCGGCAACACAAATTCTGCTGATGAACTTCGGAAACTTAAGCAAAGATTTGAGGGATGGAAGAAACAATACAAGGTCAGATTACGAGAAACAAAAGCAAGGATTTCAGAAAATGAAAAAAGCCGACGGACATGGTGGGGCGGGAAATTAAGCTCAAGAGCATAA 3540 0.3966 MVLSASPNSLTRSSLEEMLDSLRRKDEEENDKNKELPPALPSRPASKARLPPARRSLPNNFKVGSVMNDNVESKRKEISILTSTSRRESMSSFGRKRVKKDASVESPYAKLDCDTLSYFIKMKLRVWCRQPRGQWELGSIQSTSGEEASVLFSSGKVLKVARSELVPANPDILEVADDLIKLAYLNEPSVLHNLRFRYSREMIYSKAGPVLIALNPFKDLQMYGNDYVSTYRQRLVDSPHVYGIAEAAYNQMMRDEVNQSIIISGESGSGKTETAKIAMQYLAALGSGSFGRANDVLQTNCILEAFGNAKTSVNDNSSRFGKFIEIHFSATGKICGANIQTYLLEKSRVVQLASGERSYHVFYQLCAGSPSSLKERLNLKAACEYKYLNQSDCMTIGGIDDAKNFHQLMKAFDAVRIFKEDQEMIFKMLATILWLGNISFKVTDSENHIEVVGDEAITSAALLMDCSSQDLMSALSSQKIQSDQDIVSKSLTLLQAIETRDAIAKFIYSSLFEWLVQQVNKSLEVGENHTEKSISILDICGFQSFQKNSFEQFCINYANERLQQHFYRHLFKLEQEDCESDGIDCTVLDFEDNQECLDLFEKKPLSLLSLLDEESNFPEASDLTFANKLKNLLDANHCFKEESGRAFSVRHYAGEVLYDTNGFLEKNRDTLSSNSIQLLSSSNCELLKLFSEVFNQSEEHGNSTFHVGAAYSQKIGIGTKFKDQLFKLMHQLESTTPHFIRCIKPNTKKLPGIYDNELVLQQLRCCGLLEAVRISRAGYPTRIKHQDFSRRYGILLSETDVPQDPLTTTVAVLQKFNIPSEMYQVGYTKLYLRAGQIGALEDKRKHFLQATVGIQKCFRGHQVRSYFCELKNGVTTLQSFIRGEVTRRKHGVLTKSSITVYSKKIEEIHAIILLQSVIRGWKVRRDSSNINKLRKYHENAQPRRKSRVKMPEVKQDLSNELVQNRPSALAELQKRVYRAEAIIEQKEDENTELKEKLKQSERKRIEYEAKMKSMEDAWQKQMASLQTSLAAARKSLASENGTVQPVRHDLVSPRYYDSEDATLLGSQTTNGSTHMKLSGSFSVSDAGRQANGTLTTVSNLMKEFEQRRQTFNDEVKALNEVKPGQSGNTNSADELRKLKQRFEGWKKQYKVRLRETKARISENEKSRRTWWGGKLSSRA* 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1696 1179 Gene3D - 545 735 - -
Mtr8g1696 1179 Pfam IQ calmodulin-binding motif 874 890 IPR000048 GO:0005515
Mtr8g1696 1179 Pfam IQ calmodulin-binding motif 849 867 IPR000048 GO:0005515
Mtr8g1696 1179 Pfam IQ calmodulin-binding motif 909 925 IPR000048 GO:0005515
Mtr8g1696 1179 Gene3D - 357 413 - -
Mtr8g1696 1179 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 121 170 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mtr8g1696 1179 PANTHER MYOSIN 88 1174 - -
Mtr8g1696 1179 Gene3D - 847 897 - -
Mtr8g1696 1179 Coils Coil 12 35 - -
Mtr8g1696 1179 Gene3D Myosin VI head, motor domain, U50 subdomain 414 522 - -
Mtr8g1696 1179 Coils Coil 969 1017 - -
Mtr8g1696 1179 Coils Coil 1101 1121 - -
Mtr8g1696 1179 CDD MYSc_Myo8 188 833 IPR036022 -
Mtr8g1696 1179 Gene3D - 779 846 - -
Mtr8g1696 1179 MobiDBLite consensus disorder prediction 17 36 - -
Mtr8g1696 1179 Pfam Myosin head (motor domain) 177 833 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr8g1696 1179 ProSiteProfiles IQ motif profile. 870 899 IPR000048 GO:0005515
Mtr8g1696 1179 MobiDBLite consensus disorder prediction 1 16 - -
Mtr8g1696 1179 SMART iq_5 869 891 IPR000048 GO:0005515
Mtr8g1696 1179 SMART iq_5 846 868 IPR000048 GO:0005515
Mtr8g1696 1179 SMART iq_5 906 928 IPR000048 GO:0005515
Mtr8g1696 1179 ProSiteProfiles IQ motif profile. 907 935 IPR000048 GO:0005515
Mtr8g1696 1179 MobiDBLite consensus disorder prediction 1 65 - -
Mtr8g1696 1179 PANTHER MYOSIN-2 ISOFORM X1 88 1174 - -
Mtr8g1696 1179 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 871 IPR027417 -
Mtr8g1696 1179 SMART MYSc_2a 168 846 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr8g1696 1179 ProSiteProfiles Myosin motor domain profile. 174 845 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr8g1696 1179 Gene3D Kinesin motor domain 174 778 IPR036961 -
Mtr8g1696 1179 ProSiteProfiles IQ motif profile. 849 876 IPR000048 GO:0005515
Mtr8g1696 1179 PRINTS Myosin heavy chain signature 204 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr8g1696 1179 PRINTS Myosin heavy chain signature 258 283 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr8g1696 1179 PRINTS Myosin heavy chain signature 301 328 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr8g1696 1179 PRINTS Myosin heavy chain signature 533 561 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr8g1696 1179 PRINTS Myosin heavy chain signature 586 614 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1696 Mtr-Chr8 25044792 25057984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1696 1 1172 Myosins gene family AT5G54280 56.423 0.0 1369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1696 K10357 - gmx:100802074 1634.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1696 8 25044792 25057984 Mtr8g1696 8 25044792 25057984 ECH