Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1691 ATGCCTAAGTCTTACTGTTTGCTTCTTTTGGCCTTTTTTACAGTGCTCTTCTTGCATGAGGCCATGGCTCGCAATCCCATTGACTCAGAATGGCACGATGCCCATGCAACCTTCTACGGTGACATGTCTGGTGGTGAAACAATGCAGGGGGCTTGCGGCTATGGCAATCTATTCCAACAAGGATATGGGCTAGAAACCACAGCATTAAGCATGGCATTATTCAACGATGGCTACAGATGTGGTGCATGCTTTGAGATTAAGTGTGTCAATGACCCACAATGGTGCATCAAAGATGTTAACTCAATCATTGTGACAGCGACAAATTTTTGTCCACCAAATTACGACAAACCTGATGGAAATTGGTGTAACCCACCTCAAAAACATTTCGATTTGAGCATGAAGATGTTTACAACAATTGCAGTTTATAGAGCAGGGATCGTCCCAGTTCAATATCGACGTGTTCCATGCGTCAAAAGTGGTGGTGTTAGATTTGAACTAAAAGGAAACCCTTATTTTTTGATGGTTTTGGTGTACAATGTTGCCAACGCTGGTGATGTTCTGCGTGTGTCAATCAAAGGGTCTAATACTGATTGGACTCCAATGATACATAATTGGGGACAAGTTTGGCATACGGGAGTTAATTTGGTAGGACAAAATTTGTCATTTTGGGTTACGACAACTGATCGAAAAGCTTTACTGTTCACTTCCGTTACTCCTTCCAATTGGCAATTTGGACAAACCTACGAAAGCCCAGCCAATTTTTAG 765 0.4222 MPKSYCLLLLAFFTVLFLHEAMARNPIDSEWHDAHATFYGDMSGGETMQGACGYGNLFQQGYGLETTALSMALFNDGYRCGACFEIKCVNDPQWCIKDVNSIIVTATNFCPPNYDKPDGNWCNPPQKHFDLSMKMFTTIAVYRAGIVPVQYRRVPCVKSGGVRFELKGNPYFLMVLVYNVANAGDVLRVSIKGSNTDWTPMIHNWGQVWHTGVNLVGQNLSFWVTTTDRKALLFTSVTPSNWQFGQTYESPANF* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1691 254 PANTHER EXPANSIN 14 250 - -
Mtr8g1691 254 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 171 250 IPR007117 -
Mtr8g1691 254 Pfam Lytic transglycolase 66 151 IPR009009 -
Mtr8g1691 254 Gene3D - 161 254 IPR036749 -
Mtr8g1691 254 PANTHER EXPANSIN-A15 14 250 IPR002963 GO:0009664
Mtr8g1691 254 PRINTS Expansin signature 61 75 IPR002963 GO:0009664
Mtr8g1691 254 PRINTS Expansin signature 88 99 IPR002963 GO:0009664
Mtr8g1691 254 PRINTS Expansin signature 102 112 IPR002963 GO:0009664
Mtr8g1691 254 PRINTS Expansin signature 119 136 IPR002963 GO:0009664
Mtr8g1691 254 PRINTS Expansin signature 136 149 IPR002963 GO:0009664
Mtr8g1691 254 PRINTS Expansin signature 160 172 IPR002963 GO:0009664
Mtr8g1691 254 PRINTS Expansin signature 172 193 IPR002963 GO:0009664
Mtr8g1691 254 PRINTS Expansin signature 207 228 IPR002963 GO:0009664
Mtr8g1691 254 PRINTS Expansin signature 236 252 IPR002963 GO:0009664
Mtr8g1691 254 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 49 161 IPR007112 -
Mtr8g1691 254 SUPERFAMILY PHL pollen allergen 158 250 IPR036749 -
Mtr8g1691 254 SMART dpbb_1 66 151 IPR007112 -
Mtr8g1691 254 PRINTS Expansin/Lol pI family signature 30 45 IPR007118 GO:0005576
Mtr8g1691 254 PRINTS Expansin/Lol pI family signature 48 66 IPR007118 GO:0005576
Mtr8g1691 254 PRINTS Expansin/Lol pI family signature 70 88 IPR007118 GO:0005576
Mtr8g1691 254 PRINTS Expansin/Lol pI family signature 144 160 IPR007118 GO:0005576
Mtr8g1691 254 PRINTS Expansin/Lol pI family signature 198 212 IPR007118 GO:0005576
Mtr8g1691 254 PRINTS Expansin/Lol pI family signature 236 250 IPR007118 GO:0005576
Mtr8g1691 254 Pfam Expansin C-terminal domain 162 239 IPR007117 -
Mtr8g1691 254 Gene3D - 19 156 IPR036908 -
Mtr8g1691 254 SUPERFAMILY Barwin-like endoglucanases 30 179 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1691 Mtr-Chr8 24985692 24987286 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1691 18 254 Expansin Gene Family AT5G39280 61.603 1.22e-112 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1691 - - cam:101510232 408.297