Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1665 ATGGGAGAAACAATACACGACCAGCACACAGGAACAGCAACAGCAACAGCTACAACAACAAAAACAGCAGCAACAACCTCGTCGAAGAGAATCAGCAGCAGCGGAGGAGGAGGAGAAATCGTGGAGGTACAAGGAGGTCACATTGTCCGTTCAACAGGACGGAAAGACCGTCACAGTAAAGTTTGCACCGCGAAAGGTCCCCGTGACCGCCGTGTACGACTCTCAGCCCACACTGCGATTCAATTCTACGACGTGCAAGATCGTCTCGGCTACGACCGGCCAAGTAAAGCAGTCGATTGGCTCATTAAAAAAGCTAAATCTGCTATCGACGAACTCGCTCACCTCCCCGCTTGGAACCCCACAGCTACATGTTCTTCAACACCACAACAGCAGCAGCAGCAGCAAACAAATGAAATGTTTCACCGGCAATCTCCGGTGGACAACAATCCAGTAACCGCTTCTACCAGTCACCGCTCAGCGGCATTAGAGCGAAGAATGCCACCACACGAACAACAATTTCCTTCCCAACAACAACAGTTGGAGATAGACTACAACAGTAGTAGCAGTGGGAAACATGGTTTTCTTCAAGGCTCGTTAGACACTGACATTGCGGATACTATTAAGTCTTTTTTCCCAGTTGAAACGCCCACCACATCTTTTCACAATTATCAACAACCGCCGGATTTACTCTCTCGAACGGCGGCAACCACCCAGCAGCAAGATCTCCGTCTCTCATTGCAATCTTTTCAAGATCCTATTATGCTTCAGAGCCACCATGACAACCACCACCACCACCACAATAACAATAACCAAGTGCTTTTCGCCGGAAACTCCTCCCTTGGTTACGACGGTGGTGGAAGTGGAAGCACCTTGTGGTCTGAGCAGCAACAACAGCAGCAGCATCAAGAGGAACATGATAACGGCAGATTGAATAGAATGATGGCTTGGAATGCTAATAATATTAATGCTAATGCTGCAGATGGTGGTAACAGTGGCCATGGTGCTGGATTTGTGTTCAGTACACCGGCACCGGCGTTTGGCGGTTATGGTCAGTTTTTTACTCAGAGGGGACCCCTTCAGTCCAGTTACAATCCTTCAGTTCGTGCTTGGATAGATCCTTCAATGGCGACGGCGAATATCGTTGATCACCATCATCACTATCTTTCGCCGATGATCCATCAGGCTTCTGTCTCTGGTGGTGGATTCTCAGGCTTTCGTATACCAGCACGAATTCAGGGTGAAGAGGAACACGACGGCGTATCCGATAAACCGTCCTCTGCTTCCTCCGACTCTCGCCATTGA 1302 0.4916 MGETIHDQHTGTATATATTTKTAATTSSKRISSSGGGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDELAHLPAWNPTATCSSTPQQQQQQQTNEMFHRQSPVDNNPVTASTSHRSAALERRMPPHEQQFPSQQQQLEIDYNSSSSGKHGFLQGSLDTDIADTIKSFFPVETPTTSFHNYQQPPDLLSRTAATTQQQDLRLSLQSFQDPIMLQSHHDNHHHHHNNNNQVLFAGNSSLGYDGGGSGSTLWSEQQQQQQHQEEHDNGRLNRMMAWNANNINANAADGGNSGHGAGFVFSTPAPAFGGYGQFFTQRGPLQSSYNPSVRAWIDPSMATANIVDHHHHYLSPMIHQASVSGGGFSGFRIPARIQGEEEHDGVSDKPSSASSDSRH* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1665 433 MobiDBLite consensus disorder prediction 412 433 - -
Mtr8g1665 433 MobiDBLite consensus disorder prediction 122 180 - -
Mtr8g1665 433 MobiDBLite consensus disorder prediction 268 298 - -
Mtr8g1665 433 MobiDBLite consensus disorder prediction 122 159 - -
Mtr8g1665 433 MobiDBLite consensus disorder prediction 258 306 - -
Mtr8g1665 433 Pfam TCP family transcription factor 53 162 IPR017887 -
Mtr8g1665 433 ProSiteProfiles TCP domain profile. 54 112 IPR017887 -
Mtr8g1665 433 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 433 IPR005333 GO:0003700
Mtr8g1665 433 MobiDBLite consensus disorder prediction 1 60 - -
Mtr8g1665 433 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 433 - -
Mtr8g1665 433 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1665 Mtr-Chr8 24588897 24591751 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1665 32 433 TCP Transcription Factor Family AT3G15030 47.534 1.44e-97 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mtr8g1665 TCP 5.4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1665 - - mtr:MTR_8g463380 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2567 2 38602011 38603826 Mtr8g1665 8 24588897 24591751 ECH
Mtr2g3146 2 45179990 45182626 Mtr8g1665 8 24588897 24591751 ECH
Mtr4g2516 4 38723031 38725034 Mtr8g1665 8 24588897 24591751 ECH
Mtr8g1665 8 24588897 24591751 Mtr8g1665 8 24588897 24591751 ECH