Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1662 ATGGAGTTTAAGATACCTCTCTTCTTTGTTCTCTTCACTCTTGTTGTCTCAACTTCTCAAGCCTTCAAGTTTTTCGTTGGTGGAAAGGATGGATGGACTCTAAACCCTTCTGAGAATTACAACCAGTGGGCTGGAAGGAACAGGTTCCAAATCAGTGACACTATAGTTTTCAAGTACAAGAAGGGTTCAGACTCGGTGTTGGAAGTGAAGAAAGAAGATTATGAAAAGTGCAACAAAACAAACCCAATCAAGAAGTTCGAAGATGGTGAAACAGAGTTCACTTTGGACAGAGCAGGGCCATTCTATTTCATCAGTGGAAAAGATCAAAACTGTGAAAACGGTCAGAAATTAACCCTTGTTGTTATATCTCCACGAACACCAAAATCTTCTCCTTCACCAAGTGCTGGTGGATTGTCACCACCTTCACCGTCACCAACGACAACCACTCCATCACCCTCTGGTTCACCACCATCTCCAGTGGCTATTCCTCCAGCAAGCTCCCCTGTTCCGACCAGCGGTCCTACGGCATCATCTCCATCTCCAGTAGTGAGCACACCACCGGCTGGTGGACCTATGGCATCATCTCCTTCTCCAGTTGTCAGCACACCTCCGGCTGGTGGACCTATGGCTTCATCTCCTTCTCCGGCAGGTGGACCACCAGCTCTTTCACCAGCAGGTGGTCCATCTACCGCAGCAGGTGGTCCTCCGGCACCAGGACCTGGTGGAGCAGCGACTTCACCAGGACCCGGGGGAGCAGGGGCATCAGGACCCGGGGGAGCAGCAGCTGCACCGGGGTCACCAGGATCTAATTCAACTGCACCATCGGGTAACAGTGGTTCGTTTGTAGCTCCTTCGAACTTTCTGGTGTATTCCGTAACCCTTGCCGTTGGTGCTCTGTTTTTGAGTTACTGA 912 0.5033 MEFKIPLFFVLFTLVVSTSQAFKFFVGGKDGWTLNPSENYNQWAGRNRFQISDTIVFKYKKGSDSVLEVKKEDYEKCNKTNPIKKFEDGETEFTLDRAGPFYFISGKDQNCENGQKLTLVVISPRTPKSSPSPSAGGLSPPSPSPTTTTPSPSGSPPSPVAIPPASSPVPTSGPTASSPSPVVSTPPAGGPMASSPSPVVSTPPAGGPMASSPSPAGGPPALSPAGGPSTAAGGPPAPGPGGAATSPGPGGAGASGPGGAAAAPGSPGSNSTAPSGNSGSFVAPSNFLVYSVTLAVGALFLSY* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1662 303 PANTHER BLUE COPPER PROTEIN 1 302 IPR039391 GO:0009055
Mtr8g1662 303 PRINTS Proline rich extensin signature 124 136 - -
Mtr8g1662 303 PRINTS Proline rich extensin signature 136 157 - -
Mtr8g1662 303 PRINTS Proline rich extensin signature 157 173 - -
Mtr8g1662 303 PRINTS Proline rich extensin signature 187 212 - -
Mtr8g1662 303 MobiDBLite consensus disorder prediction 124 280 - -
Mtr8g1662 303 Pfam Plastocyanin-like domain 32 115 IPR003245 GO:0009055
Mtr8g1662 303 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 1 302 - -
Mtr8g1662 303 MobiDBLite consensus disorder prediction 265 280 - -
Mtr8g1662 303 MobiDBLite consensus disorder prediction 180 222 - -
Mtr8g1662 303 SUPERFAMILY Cupredoxins 21 122 IPR008972 -
Mtr8g1662 303 ProSiteProfiles Phytocyanin domain profile. 22 123 IPR003245 GO:0009055
Mtr8g1662 303 MobiDBLite consensus disorder prediction 134 170 - -
Mtr8g1662 303 CDD OsENODL1_like 22 122 IPR041846 -
Mtr8g1662 303 Gene3D - 20 125 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1662 Mtr-Chr8 24482531 24484305 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1662 1 295 Phytocyanin Superfamily AT4G27520 37.429 1.34e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1662 - - cam:101497669 211.075