LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr8g1646	ATGTATAATATTATAAGTATCGTGACCAACGTTCCAAACAACAACTATAATACCTATGCAACGCTCTTGGACTCAGGAAACTTGGTACTATTGAACGCCTCTAACAAACAGATTTTATGGCAGAGTTTTAATCACCCCACGGATACCCTTTTACCTGGAATGAACATCGGACACGATATTAACACAGGGTACACTTTGTCTTTGAGATCATGGACAACTGCAGAAGACCCTGCTCCTGGACCGTATACTCTCCAATATGATGTTGGCATGGCGAGTCTAACCATAAATAAAGGTTCTAATGTGTTATGGGTTGATGGTAATTCCAATTTATCTATTCAGGGTGTTTTAAATCGAGTGGATTTGCAACTCAAAAGAGACCATGACACACTTTCAATCGGTAGCAATTCTAGGTTGGTATTGGAAGTGTCTGGGGATCTTAAATACCAAGGCTGGTCAGAGGAATCTAAGCGTTGGGTTTCTCTACAATCATCCAAGTGCGGAACAAACAATTCTTGTGGAATTTTTTCCATTTGTAATTCGCAAGATCGCGACCCTTGTCACTGTCTCAATGGTTTTGAACCGTTTGATGCTGATTCTTGGAGAAAGGGGAATAGGTCAGCTGGATGTGTCAGGATAAACGAATTATCCTGCAACAGTAAAAATAGCATAGATGGATTCAAACGTTTCAGTTTAGTTGAATTACCTCCATATGAAGTGAACCTACAGTTCGATGCGCTCTCACAGTGTAACAACACTTGTTACACCAATTGTTCTTGTGTTGCTTATGCTTATGATTTTAACGGCAACTGCAAGTTGTGGAATGATCAAGTACAGACTCTGAAGAACATCTCAACTGAAATTCAAGACCGTAATAATAATAAACCAAATTTTTATCTCAGACTTGCTGGCTCGGACTTGCTTCCCCCAAAACCTAATGAAACGACTGCAGTTGGAAGACATGAAAACAGGAAGAGGAATCTAATTCTAATTGCTACTTTGATCTCATTTCTAATATTGCTTATACTGATTGGTTTATTTGTTTACTGGACTAGAAAGCAAAGGAGGAAAGGGGATGATTTGCTAAATTTTGAAGTAGGCATGACCATGAAAGTTAAAGACTCGGAAATTACTAAAGCAGACAAGGGTGCAAAAGTTAGGAGGAAAGAAGTCAAGTTGCCATTATTTAGTCTTGTGAGCGTTTCAGCAGCAACTAATAACTTTTCCGATACAAAGAAACTTGGCGAAGGTGGCTTTGGACCTGTTTATAAGGGTACATTATTGAATGGGGGTGAGGTCGCGATAAAAAGGCTATCTCGAATATCAGGTCAAGGATGGGAGGAGTTGCGAAATGAAGCATTGTTGATTGCGAAACTCCAACACAATAATCTTGTTAGACTTCTCGGCTGCTGCATTGAGCGGGATGAAAAAATGCTTATTTATGAATTCATGCCCAATAAAAGCTTGGATTTTTTTATTTTTGATGCAGTAAAAAGAAGGATGCTAGATTGGGAAACACGGGTTCGAATAATTGACGGGATTGCACAAGGACTCCTTTATCTGCATCAATATTCCAGATTCCGAATCATTCACCGAGATTTAAAAGCTAGCAACATATTGTTAGACGCCAACATGAATCCTAAAATATCAGACTTTGGAATGGCGAGAATATTTGGTGAGAATGTTCTTCAGGCAAATACAAATCGCATAGTTGGAACTTATGGCTACATGTCCCCAGAATATGCTATGGAAGGCGTTTATTCGATTAAATCTGACGTGTTTAGCTTTGGAGTCCTTTTGTTAGAGATTATAAGCGGAAAGAAGAATACTGGTTTTTATCAAACAAATTCCTTCAATCTTCTTGGATATGCTTGGGATCTATGGACCAACAATTCTGGAATGGACTTGATTGATTCAAAACTGGATGATATCTCCAACAAGCATTTAGTACCAAAATACGTGAATATTGGACTTCTATGTGTTCAACAAAGTCCAGAAGATAGACCAACCATGTCTGATGTTGTAACAATGATTGGGAATGACACTACATCCCTTCTTAGTCCAAAGCCACCGGCATTTCAAAATGTGAGAGGTATTGAAAATTCAAGACTCTCTAGAAGCATAGAAGAAAACGTTTCTGTGAATGTTGTCACAAATTCACTAGTTGAAGCAAGATGA	2175	0.3862	MYNIISIVTNVPNNNYNTYATLLDSGNLVLLNASNKQILWQSFNHPTDTLLPGMNIGHDINTGYTLSLRSWTTAEDPAPGPYTLQYDVGMASLTINKGSNVLWVDGNSNLSIQGVLNRVDLQLKRDHDTLSIGSNSRLVLEVSGDLKYQGWSEESKRWVSLQSSKCGTNNSCGIFSICNSQDRDPCHCLNGFEPFDADSWRKGNRSAGCVRINELSCNSKNSIDGFKRFSLVELPPYEVNLQFDALSQCNNTCYTNCSCVAYAYDFNGNCKLWNDQVQTLKNISTEIQDRNNNKPNFYLRLAGSDLLPPKPNETTAVGRHENRKRNLILIATLISFLILLILIGLFVYWTRKQRRKGDDLLNFEVGMTMKVKDSEITKADKGAKVRRKEVKLPLFSLVSVSAATNNFSDTKKLGEGGFGPVYKGTLLNGGEVAIKRLSRISGQGWEELRNEALLIAKLQHNNLVRLLGCCIERDEKMLIYEFMPNKSLDFFIFDAVKRRMLDWETRVRIIDGIAQGLLYLHQYSRFRIIHRDLKASNILLDANMNPKISDFGMARIFGENVLQANTNRIVGTYGYMSPEYAMEGVYSIKSDVFSFGVLLLEIISGKKNTGFYQTNSFNLLGYAWDLWTNNSGMDLIDSKLDDISNKHLVPKYVNIGLLCVQQSPEDRPTMSDVVTMIGNDTTSLLSPKPPAFQNVRGIENSRLSRSIEENVSVNVVTNSLVEAR*	725

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr8g1646	724	SUPERFAMILY	Protein kinase-like (PK-like)	392	694	IPR011009	-
	Mtr8g1646	724	CDD	STKc_IRAK	413	677	-	-
	Mtr8g1646	724	SMART	serkin_6	407	677	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr8g1646	724	Pfam	PAN-like domain	217	276	IPR003609	-
	Mtr8g1646	724	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	4	722	-	-
	Mtr8g1646	724	SMART	ntp_6	221	301	IPR003609	-
	Mtr8g1646	724	ProSiteProfiles	Protein kinase domain profile.	407	685	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr8g1646	724	Pfam	D-mannose binding lectin	9	71	IPR001480	-
	Mtr8g1646	724	Pfam	Protein tyrosine and serine/threonine kinase	410	676	IPR001245	GO:0004672\|GO:0006468
	Mtr8g1646	724	CDD	PAN_AP_plant	215	302	-	-
	Mtr8g1646	724	Gene3D	Phosphorylase Kinase; domain 1	366	482	-	-
	Mtr8g1646	724	PIRSF	SRK	3	724	IPR024171	GO:0004674
	Mtr8g1646	724	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	528	540	IPR008271	GO:0004672\|GO:0006468
	Mtr8g1646	724	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 ISOFORM X1	4	722	-	-
	Mtr8g1646	724	Gene3D	Transferase(Phosphotransferase) domain 1	483	685	-	-
	Mtr8g1646	724	ProSiteProfiles	PAN/Apple domain profile.	217	302	IPR003609	-
	Mtr8g1646	724	Gene3D	-	4	88	-	-
	Mtr8g1646	724	SUPERFAMILY	alpha-D-mannose-specific plant lectins	9	77	IPR036426	-
	Mtr8g1646	724	Pfam	S-locus glycoprotein domain	135	194	IPR000858	GO:0048544

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr8g1646	Mtr-Chr8	24223723	24230361	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr8g1646	328	692	Receptor kinase-like Gene Family	AT4G23190	52.575	1.96e-124	382

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Mtr8g1646		PK_Tyr_Ser-Thr	2.8e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr8g1646	-		-	mtr:MTR_8g061110	1427.15