Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1622 ATGGATATGGAGAAAGAGATGCAAGACATTGAGGCTCAATCCACTTACAAAACTACATTGCAGAAGGAAGCATCTAAAATCTTCCACAAGAGAAATCCTCCAGTAACTTTGAAGTTCCATGATGTTGTATATAAAATCAACAAGACCAAAAAGTGGAAATTACTTGAGAGAAAAACCAAGGTAGAAGAGAAAGTAATACTGAATGGAGTTACAGGAATGGTTCGGCCGGGTGAGATTCTTGCCATTTTAGGTCCATCTGGAAGTGGTAAAACAACTCTCCTAACAGCACTAGGAGGAAGACTAGGAGGAAAACTCTCTGGAACAATAACTTACAATGGCAAAATCTTTTCAAATTCGATGAAGAAGAGCATTGGATTTGTTACACAAGAGGATATTCTCTATCCTCACTTGACTGTTACAGAAACTCTAGTTTTCACTTCCCTTCTAAGATTGCCTAATAGTTTCACCGAAAAAGAGAAAATTGAGCTTGCGAAATCTGTCATGGCTCTACTTGGTTTAACAAAATGTAAAGATAGCATCATTGGAAAACCAATGTTGAGAGGGGTTTCTGGAGGGGAAAGAAAAAGGGTAAGCATAGGACAAGAGATGCTTATAAATCCAAGTTTGTTGTTTTTAGATGAACCTACTTCGGGATTAGATTCAACAACGGCGCAGAAAATCGTGTTCAATTTATGGGAGCTTGCAAGCGGAGGAAGAACATTTGTGATGACAATACATCAACCTTCAAGTAGGATATATAATATGTTTCACACTGTTTTGATTTTATCAGAAGGAGTTCCTTTGTATTATGGAAAGGGTTCTGAAGCTATGGAATATTTCTCTGGTATTGGATATGAACCTGAAATTGCCATGAGCCCATCTGATTTCCTTTTGGATCTTGCAAATGGAGTTTACACTGATCAATCAAACGAGGATCATGCCTTAAATAAGAACGAATTGATTTCTGCATATAAGAACTACTTTGATGCCAAATGGAAGCCAATAATACTTGATGAAAATCCCGACAACGGTGAAATCCAGAGTGGATTTGAAGACAGCGGCTTTGGGAAATGGTCTACTAGTTGGTCGCAGCAATTCATTGTGCTGTTAAAAAGAGACCTGAAAGAGAGAAAACATGAACCATTCTCCGTCCTGCGAATTTCTAAGATCGTTGTGATTGCCCTTCTTACAGGACTACTTTGGTATAAGTCTAGTGTTTCGCACTTGCAGGATCAGATTGGCCTTCTATTCTTCATTAATAGCTTCTGGGCTGTGGTACCTTTCTACAAAGCAATATTCACTTTCCCTCAAGAGGCAACTATGCTGGAAAAAGAAAGATCTTCCGGAATGTATAGACTCTCATCATACTTCATGTCAAGGATGATAGTTGACCTTCCAATGGAGCTTATTCTTCCCACCATATATATTATCATAATATATTTTATGACAGGGCTGAAACCTAATGTGATCAACTTCTTATACACTTTGTTTAGCCTCTTACTCAATGTTTTAGTTTCACAAGGACTAGGCCTAGCCATTGGTGCTATTATTATGGAACAAAAATCGGCAATCACGCTTGGCTCAATCATCTTGCTTAGTTTTGTGCTGGTTGTTGGATTCTATGTTCAACATGTTCCAAAATTTATAGCATGGATCAAGTACATTTCCATCACATACTATATATACAAGCTCGCTTTAGGGTCTCAGTATGACATTAATGACACATACCCATGTTCTAATGGGAAGTGTTTGATTGCAGAGTTTCCATTGATAAGGCAAATGGGAGAACTAAATCTGCAAGGGCAGCTCATGGCTGTATTTCTTCTATTCATAATGCTAATAGGTTATAGACTTATGGCTTATTTTGCTCTTATGAGGATTGGGGTGACAAAGAAGATTTCTATCTGA 1908 0.3795 MDMEKEMQDIEAQSTYKTTLQKEASKIFHKRNPPVTLKFHDVVYKINKTKKWKLLERKTKVEEKVILNGVTGMVRPGEILAILGPSGSGKTTLLTALGGRLGGKLSGTITYNGKIFSNSMKKSIGFVTQEDILYPHLTVTETLVFTSLLRLPNSFTEKEKIELAKSVMALLGLTKCKDSIIGKPMLRGVSGGERKRVSIGQEMLINPSLLFLDEPTSGLDSTTAQKIVFNLWELASGGRTFVMTIHQPSSRIYNMFHTVLILSEGVPLYYGKGSEAMEYFSGIGYEPEIAMSPSDFLLDLANGVYTDQSNEDHALNKNELISAYKNYFDAKWKPIILDENPDNGEIQSGFEDSGFGKWSTSWSQQFIVLLKRDLKERKHEPFSVLRISKIVVIALLTGLLWYKSSVSHLQDQIGLLFFINSFWAVVPFYKAIFTFPQEATMLEKERSSGMYRLSSYFMSRMIVDLPMELILPTIYIIIIYFMTGLKPNVINFLYTLFSLLLNVLVSQGLGLAIGAIIMEQKSAITLGSIILLSFVLVVGFYVQHVPKFIAWIKYISITYYIYKLALGSQYDINDTYPCSNGKCLIAEFPLIRQMGELNLQGQLMAVFLLFIMLIGYRLMAYFALMRIGVTKKISI* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1622 635 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 17 628 - -
Mtr8g1622 635 ProSitePatterns ABC transporters family signature. 189 203 IPR017871 GO:0005524
Mtr8g1622 635 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 17 628 - -
Mtr8g1622 635 Pfam ABC transporter 67 217 IPR003439 GO:0005524
Mtr8g1622 635 Gene3D - 55 283 IPR027417 -
Mtr8g1622 635 Pfam ABC-2 type transporter 246 314 IPR043926 GO:0140359
Mtr8g1622 635 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 37 289 IPR003439 GO:0005524
Mtr8g1622 635 Pfam ABC-2 type transporter 364 569 IPR013525 GO:0016020|GO:0140359
Mtr8g1622 635 SMART AAA_5 76 266 IPR003593 -
Mtr8g1622 635 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 281 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1622 Mtr-Chr8 23763607 23766789 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1622 74 265 Calmodulin-binding Proteins AT2G36910 28.358 1.51e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1622 K05681 - gmx:100812397 860.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1622 8 23763607 23766789 Mtr8g1622 8 23763607 23766789 ECH