Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1620 ATGGGAGTTCCAGAGAGAGATCCTCTTTCACAGTTGAGTTTACCACCTGGTTTCAGATTCTTCCCCACTGATGAGGAGCTTCTTGTTCAATATCTATGTCGTAAAGTTGCAGGACATCATTTTTCTTTGCCAATTATTGCTGAAATTGATTTGTATAAATTTGATCCTTGGGTTCTTCCAGGCAAGGCGAATTTTGGTGAGAAAGAATGGTATTTCTTCAGTCCAAGGGACAGGAAATATCCAAATGGTTCTAGACCAAACAGAGTTGCTGGTTCTGGTTATTGGAAAGCCACAGGAACAGACAAAATTATCACAACTGAAGGTAGAAAAGTTGGCATAAAAAAAGCACTTGTTTTCTACATTGGCAAAGCACCAAAAGGAACAAAAACTAATTGGATTATGCATGAGTATCGTCTTCTTGACGCTTCGCGAAAACACAATCTTGGTAGCTCAAAACTTGATGATTGGGTTTTGTGTCGAATATACAAGAAAAACTCAAGCTCACAAAAGGAAATTCCAACATTTTCAAGCAAAGAATGCTGCAATGCTTCTTCGCCTTCATCGTCGTCCCAAGTGGATGAAATGTTGGACTCATTCTTGGAAATTGATGATCAGAGCTTTGCACTGCCGCGGGTGACATCACTACGAATGCTACAACAAGAGGAGAAGTTCGGCTTTAACAACATGGGTGCCGGAATTTTTTCCGATTGGGTTAACCCAACGGATATTGAATCCTCACCGGAATTTGGTTTAGGAAACCAAAGTGATGGGATGATGAATTACGGTTGTAATGACTATTGTGTTCCTTCCGTGCCACCGTTTGGCAACATGGATTTGTCGGCGGAGTCCAGAAACCCCACCGACGAAGAGGTTCAAAGCGGCATGAGGACTAACCGGGTCACTGACCCTTCTAGTTTATATCAACATAATACTAATGTATTTTTATCGGGCTTGGGTGACCCATTCGGGTTTGGGTATTCGGGTCATTAA 990 0.4182 MGVPERDPLSQLSLPPGFRFFPTDEELLVQYLCRKVAGHHFSLPIIAEIDLYKFDPWVLPGKANFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRLLDASRKHNLGSSKLDDWVLCRIYKKNSSSQKEIPTFSSKECCNASSPSSSSQVDEMLDSFLEIDDQSFALPRVTSLRMLQQEEKFGFNNMGAGIFSDWVNPTDIESSPEFGLGNQSDGMMNYGCNDYCVPSVPPFGNMDLSAESRNPTDEEVQSGMRTNRVTDPSSLYQHNTNVFLSGLGDPFGFGYSGH* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1620 329 PANTHER NAC TRANSCRIPTION FACTOR 56 1 310 - -
Mtr8g1620 329 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Mtr8g1620 329 MobiDBLite consensus disorder prediction 278 303 - -
Mtr8g1620 329 MobiDBLite consensus disorder prediction 280 303 - -
Mtr8g1620 329 SUPERFAMILY NAC domain 10 165 IPR036093 GO:0003677|GO:0006355
Mtr8g1620 329 PANTHER NAC DOMAIN-CONTAINING PROTEIN 55 1 310 - -
Mtr8g1620 329 Gene3D NAC domain 23 170 IPR036093 GO:0003677|GO:0006355
Mtr8g1620 329 ProSiteProfiles NAC domain profile. 14 164 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1620 Mtr-Chr8 23750649 23752747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1620 1 295 NAC Transcription Factor Family AT4G27410 60.127 1.79e-115 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr8g1620 NAM 8.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1620 - - gmx:100811301 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1620 8 23750649 23752747 Mtr8g1620 8 23750649 23752747 ECH