Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1607 ATGAGTTTCTTCTTTTTCTCTCTATTTTCTCTCCTTTTGCTCTTTTCTCTTTGTTTTGTTTCATTTACTCTAGGAGCCACTTTACAAGAAGATGAAGTGGAAGCTCTGAAAGACATAGGTAAAACACTTGGGAAAAAGGATTGGGACTTCAGTGTAGATCCATGTAGTGGAAGGAATAACTGGATATCTTCAACTCAATTACATGGTTCTGAAAATGCTGTTACTTGCAATTGCTCTTTTCAAAATAACACTCTCTGCCATGTTGTTAGCGTTGTTCTAAAAGCACAAAACCTTTCAGGTACTCTTCCACCTGACCTAGTGAGGTTGCCTTTTCTCCAAGAAATTGACCTAACCCTCAACTATCTTAATGGTACAATTCCAAAAGAATGGGCCACATTAAAACTTGTAAACATTTCCTTCTACGGAAATCGTCTATCTGGTCCAATTCCAAAGGAGTTTGGAAACATCACCACTCTCAAAAACTTGGTATTGGAGTTCAATCAATTATCCGGGAATCTTCCCCCAGAACTTGGGAGTCTTTCCCAGATTGAAGGACTGCTTCTTTCTTCCAATAACTTCACCGGAGTGTTACCTGCAACATTTGCTAAGCTCACTGCATTGAAGCAATTTCGGATTGGTGACAGTGGATTCTCTGGAGCAATACCCAACTTTATTCAGAGCTGGATAAATCTTGAGATGCTCACAATCCAAGGGAGTGGTTTGAGTGGGCCAATTCCTTCTGGAATTTCACTTTTGAAGAACCTCACTGACTTGACTATTACTGACTTGAATGGATCTGATTCACCTTTTCCACAACTTCAAAACATGTCAAACCTGTCAAAATTAGTATTGAGAAGTTGCAATATCAGTGGAGCATTGCCCGAATATCTTGGAAAGTTAACTAATCTGGAAGTGATTGACCTCAGCAACAACAAATTAAGTGGACAAATCCCCGTGAGCTTTGATGGTCTACAGAACATGTATTTGCTATTTTTATCTGGGAATCAGTTGTCTGGATCGCTGCCAGACTGGATAGCTAAACCAGACTATGTAGACCTGTCATATAACAACTTCACTATAACAAACTTTGAGCTGCAGACTTGTCAACAAGGAAGTGTGAACTTGTTTGCATCTTCTTTGAAGGGAAACAGCTTAGGAAATATTTCATGTATGGAAAACTATCAATGTCCTAAAACTTGGTATTCTCTCTATATAAATTGTGGTGGAAAGGGCACAACAGTTGATGGAAATAAAACCTATGATGATGATTCAAATGAGATGGGACCATCAAGGTATCGTCAAATTGGACCAAACTGGGCACTTATAACTGCTGGTCACTTCTTTGATAGTGGACGCCCTGACTACTACACATGGTCTAATACAACAAAGCTCGCTGTGGACAACGATGATCCTAAACTGTACATGGATGCACACGTTTCTCCGAATTCTCTAACTTATTATGGTTTCTGCCTTGGAAACGGAAATTATACTGTGAAGCTCCATTTTGCAGAAATAATGTTCAGTGATGATAAAACATATAGCAGCATTGGAAGGCGTGTATTTGACATCTACATCCAGAGAAAGTTGGTGTCAAAGGATTTTGATATTGTGAAAGAGGCTGGTGGTGTTGGTAAGGCTGTCATTGAAACTTTTACTGCTAGTGTGACTAGTAATGCATTGGAGATTCGCTTATATTGGGCTGGGAAAGGAACAACTACTATCCCATTTGGATCAGTATATGGTCCTCTTATATCAGCTATATCAGTAAATTCTGATTTTACGCCCCCATCCGAAAATAGTAGAAGCATACCTGCCGGGGGTGTTGCTGCCATTGTGGCAGCAGCAATTGCTATCATCTTGATAATCGGCATAATGTGGTGGAAGGGCTGTTTAAGACTGAAATGTTTCGGGTCAAGAGAGCGAAAGGGTCTTGCTTCACAAACTGGCTTGTTCACCTTACGGCAACTTAAAGCAGCAACAAACAACTTTGATGAATCCTTCAAGATTGGAGAAGGAGGATTTGGTCCAGTTTACAAGGGTGTTCTATTTGATGGCCCCATAGTAGCGATTAAGCAGCTATCTTCTAAATCAACACAAGGATCTCGTGAATTTATTAATGAGATTGGCATGATTTCTACTTTACAACACCCCAATCTTGTTAAGCTCTATGGCTTCTGTATGGAAGATGATCAGTTGTTGTTGATATATGAATACATGGAAAACAATAGCCTTGCTCATGCTCTATTTGCCAAAAAAGAAGACCTAGAAAATCGTCAATTGAGATTGGATTGGAAAACAAGGAAGAGGATTTGCATTGGTATTGCTAAAGGTTTAGCTTACCTTCATGGAGAATCGAAAATAAAGATCATTCATAGGGACATCAAGGCCACTAATGTGTTGCTAGATAAAGATCTCAACCCCAAGATATCGGATTTCGGTCTGGCTAAGCTAAATGAAGACGACAAAACCCACATGAACACAAGAATAGCCGGCACTTATGGATACATGGCTCCTGAGTATGCTATGCATGGTTATTTGACAGACAAAGCAGATGTTTATAGTTTTGGAATTGTTATATTGGAAATTGTAAGCGGAAACAACAACACCGTTAGCCATCCTCAGGAGGAATGCTTCTCTCTTCTTGATTGGGCACGCCTCTTGAAGGAAAAAGATAATCTAATGCAGCTTGTTGATCGGAGGTTGGGCGAAGACTTCAAGAAAGAGGAGGTAATGATGATGATCAACGTTGCTCTTTTATGTACCAGTTTTTCTCCATCGCTCAGGCCCTCCATGTCTTCAGTTGTAAGCATGTTTGAAGGAAAAACAAATGTTCAAGAAGTGGTGGCAGAATCAAGTGAGGTATTGGATGATAAGAAATATAAGGTGATGCAACAATACTACAAACATAAAGGAGAAAATAGTACAAGTGAGGCTGGAAGCCAAAGCATTGCATCAGATGAATCGCATGCCTTTATATATTATACAGATTCTACTAAGAACCAAGAAATTAGGAAAACTATATAA 3024 0.3948 MSFFFFSLFSLLLLFSLCFVSFTLGATLQEDEVEALKDIGKTLGKKDWDFSVDPCSGRNNWISSTQLHGSENAVTCNCSFQNNTLCHVVSVVLKAQNLSGTLPPDLVRLPFLQEIDLTLNYLNGTIPKEWATLKLVNISFYGNRLSGPIPKEFGNITTLKNLVLEFNQLSGNLPPELGSLSQIEGLLLSSNNFTGVLPATFAKLTALKQFRIGDSGFSGAIPNFIQSWINLEMLTIQGSGLSGPIPSGISLLKNLTDLTITDLNGSDSPFPQLQNMSNLSKLVLRSCNISGALPEYLGKLTNLEVIDLSNNKLSGQIPVSFDGLQNMYLLFLSGNQLSGSLPDWIAKPDYVDLSYNNFTITNFELQTCQQGSVNLFASSLKGNSLGNISCMENYQCPKTWYSLYINCGGKGTTVDGNKTYDDDSNEMGPSRYRQIGPNWALITAGHFFDSGRPDYYTWSNTTKLAVDNDDPKLYMDAHVSPNSLTYYGFCLGNGNYTVKLHFAEIMFSDDKTYSSIGRRVFDIYIQRKLVSKDFDIVKEAGGVGKAVIETFTASVTSNALEIRLYWAGKGTTTIPFGSVYGPLISAISVNSDFTPPSENSRSIPAGGVAAIVAAAIAIILIIGIMWWKGCLRLKCFGSRERKGLASQTGLFTLRQLKAATNNFDESFKIGEGGFGPVYKGVLFDGPIVAIKQLSSKSTQGSREFINEIGMISTLQHPNLVKLYGFCMEDDQLLLIYEYMENNSLAHALFAKKEDLENRQLRLDWKTRKRICIGIAKGLAYLHGESKIKIIHRDIKATNVLLDKDLNPKISDFGLAKLNEDDKTHMNTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVILEIVSGNNNTVSHPQEECFSLLDWARLLKEKDNLMQLVDRRLGEDFKKEEVMMMINVALLCTSFSPSLRPSMSSVVSMFEGKTNVQEVVAESSEVLDDKKYKVMQQYYKHKGENSTSEAGSQSIASDESHAFIYYTDSTKNQEIRKTI* 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1607 1007 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 289 347 - -
Mtr8g1607 1007 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 75 289 - -
Mtr8g1607 1007 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 384 976 - -
Mtr8g1607 1007 Pfam Leucine rich repeat 277 337 IPR001611 GO:0005515
Mtr8g1607 1007 Gene3D Ribonuclease Inhibitor 201 398 IPR032675 -
Mtr8g1607 1007 ProSiteProfiles Protein kinase domain profile. 663 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1607 1007 Gene3D - 400 592 - -
Mtr8g1607 1007 CDD STKc_IRAK 669 940 - -
Mtr8g1607 1007 SUPERFAMILY Protein kinase-like (PK-like) 647 944 IPR011009 -
Mtr8g1607 1007 SUPERFAMILY L domain-like 82 359 - -
Mtr8g1607 1007 Pfam Protein kinase domain 666 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1607 1007 Pfam Malectin domain 402 587 IPR021720 -
Mtr8g1607 1007 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672|GO:0006468
Mtr8g1607 1007 Gene3D Ribonuclease Inhibitor 32 200 IPR032675 -
Mtr8g1607 1007 SMART serkin_6 663 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1607 1007 Gene3D Phosphorylase Kinase; domain 1 634 738 - -
Mtr8g1607 1007 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 289 347 - -
Mtr8g1607 1007 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 75 289 - -
Mtr8g1607 1007 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 384 976 - -
Mtr8g1607 1007 Gene3D Transferase(Phosphotransferase) domain 1 739 965 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1607 Mtr-Chr8 23376116 23386543 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1607 19 990 Receptor kinase-like Gene Family AT1G53420 52.905 0.0 979
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g1607 Pkinase 6.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1607 - - ccaj:109799273 1365.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1607 8 23376116 23386543 Mtr8g1607 8 23376116 23386543 ECH