Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1606 ATGAGTTTCTTCTTTTTCTCTCTATTTTCTCTCCTTTTGCTCTTTCCTCTTTCTTTTGTTTCATTTACTCTAGGAGCCACTTTACAAGAAGATGAAGTGGAAGCTCTGAAAGACATAGGTAAAACACTTGGGAAAAAGGATTGGGACTTCAGTGTAGATCCATGTAGTGGAAGGAATAACTGGATATCTTCAACTCAATTACATGGTTCTGAAAATGCTGTTACTTGCAATTGCTCTTTTCAAAATAACACTCTCTGCCATGTTGTTAGCGTTGTTATAAAAGCACAAAACCTTTCAGGTACTCTTCCACCTGACCTAGTGAGGTTGCCTTTTCTCCAAGAAATCGACCTAACCCTCAACTATCTTAACGGTACGATTCCCAAACAATGGGCCACATTAAAACTTGTAAACGTTTCCTTCTACGGAAATCGTCTATCCGGTCCAATTCCAAAGGAGTTTGGAAACATTACCACTCTCAAAAGCTTGGTATTGGAGTTCAATCAATTATCCGGGAATCTTCCCCCAGAACTTGGGAGTCTTTCCCAGATTGAAAGACTGCTTCTTTCTTCCAATAACTTTACCGGATTGTTACCTGCAACATTTGCTAAGCTCACTGCATTGAAGCAATTTCGAATTGGTGACAGTCAATTCTCTGGAGCAATACCTAACTTTATACAAAGTTGGATAAATCTTGAGATGCTCACAATCCGAGGGAGTGGTTTGAGTGGGCCAATTCCTTCTGGAATTTCACTTTTGAAGAACCTCACTGACTTGACTATTACTGATTTAAATGGATCTGATTCACCTTTTCCACAAGTTCAAAACATGTCAAATCTGTCAAAATTAGTATTGAGAAATTGCAATATCAGTGGAGCATTGCCCGAATATCTTGGAAAGTTAACTAATCTGAAAGTGATTGACCTCGGCGACAACAAATTAAGTGGACAAATCCCCATGAGCTTCGATGGTCTACAGAACATGTATTTGCTATTTTTATCTGGGAATCAGTTGTCTGGATCGCTGCCAGACTGGATAGCTAAGCCAGACTTTGTAGACCTGTCATATAACAACTTCACTATAACAAACTTTGAGCAGCAGACTTGTCAACAAGGAACTGTGAACTTGTTTGCATCTTCTTTGAAGGGAAACAGATTAGGAAATATTTCATGTATGGAAAACTATCAATGTCCTAAAACTTGGTATTCTCTCTATATAAATTGTGGTGGAAAGAGCATAACAGTTGATGGAAATAAAACATATGATGATGATTCAAATGAGATGGGACCAGCAAGGTATCGTCAAATTGGAGAAAACTGGGCACTTATAACTGCTGGTCACTTCTTTGATAGTGGACGCCCTGACTACTACACGTGGTCTAATACAACAAAGCTCGCTGTGGACAACGATGATCCTAAACTGTACATGGATGCACGTGTTTCTCCGAATTCTCTAACTTATTATGGTTTCTGCCTTGGAAACGGAAATTATATCGTGAAGCTCCATTTTGCAGAAATAATGTTCAGTGATGATAAAACATATAGCAGCATTGGAAGGCGTGTATTTGACATCTATATCCAGAGAAAGTTGGTGTCAAAGGATTTTGATATTGTGAAAGAGGCTGGCGGTGTTGGTAAGGCTGTCATTGAAACTTTTACTGCTAGTGTGACTAGTAATGCATTGGAGATTCGCTTATATTGGGCTGGGAAAGGAACAACTACTATCCCATTTGGATCAGTATATGGTCCTCTAATATCAGCTATATCAGTAAATTCTGATTTTACGCCCCCATCAGAAAATAGTAGAAGCATACCTGCCGGGGGTGTTGCTGCCATTGTGGCTGCAGCAATTGTTATCATCTTGATAATCAGCATAATGTGGTGGAAGGGCTGTTTAAGACTCAAATGTTTCGGGTCAAGAGAGCGAAAGGGTCTTGCTTCACAAACTGGCTTGTTCACCTTACGGCAACTTAAAGCAGCAACAAACAACTTTGATGAATCCTTCAAGATTGGAGAAGGAGGATTTGGTCCAGTTTACAAGGGTGTTCTATTTGATGGCCCCATAGTAGCGATTAAGCAGCTATCTTCTAAATCAACACAAGGATCTCGTGAATTTATTAATGAGATTGGGATGATTTCTACTTTACAACACCCCAATCTTGTTAAGCTCTATGGCTTCTGTATGGAAGATGATCAGTTGTTGTTGATATATGAATACATGGAAAACAATAGTCTTGCTCATGCTCTATTTGCCAAAAAAGAAGACCTAGAAAATCATCAATTGAGATTGGATTGGAAAACAAGGAAGAGGATTTGCATTGGTATTGCTAAAGGTTTAGCTTACCTTCATGGAGAGTCGAAAATAAAGATCATTCATAGGGACATCAAGGCCACTAATGTGTTGCTAGATAAAGATCTCAACCCCAAGATATCGGATTTCGGTCTGGCTAAGCTAAATGAAGACGACAAAACCCATATGAACACAAGAATAGCCGGCACTTATGGGTACATGGCTCCTGAGTATGCTATGCATGGTTACTTGACAGACAAGGCAGATGTTTATAGTTTTGGAATTGTTATATTGGAAATTGTAAGCGGAAACAACAACACCGTTAGCCATCCTCAGGAGGAATGCTTCTCTCTTCTTGATTGGGCGCGCCTCTTGAAGGAAAAGGATAATCTAATGGAGCTTGTTGATCGGAGGTTGGGCGAAGACTTCAAGAAAGAGGAGGTAACGATGATGATCAACGTTGCTCTTTTATGCACCAGTTTTTCTCCTTCGCTCAGGCCTTCCATGTCTTCAGTTGTAAGCATGCTTGAAGGAAAAACAAATGTTCAAGAAGTGGTGGCAGAATCAACTGAGGTATTGGATGATAAGAAATATAAGGTGATGCAACAATACTACAAATATAGAGGAGAAAATAGCACAAGTGAGGCCGGAAGCCAAAGCATCGCAACAGATGAATCAAATACCTTTATATATGATACAGATTCTTCATACTTGGAACCAAGAAATTAG 3015 0.395 MSFFFFSLFSLLLLFPLSFVSFTLGATLQEDEVEALKDIGKTLGKKDWDFSVDPCSGRNNWISSTQLHGSENAVTCNCSFQNNTLCHVVSVVIKAQNLSGTLPPDLVRLPFLQEIDLTLNYLNGTIPKQWATLKLVNVSFYGNRLSGPIPKEFGNITTLKSLVLEFNQLSGNLPPELGSLSQIERLLLSSNNFTGLLPATFAKLTALKQFRIGDSQFSGAIPNFIQSWINLEMLTIRGSGLSGPIPSGISLLKNLTDLTITDLNGSDSPFPQVQNMSNLSKLVLRNCNISGALPEYLGKLTNLKVIDLGDNKLSGQIPMSFDGLQNMYLLFLSGNQLSGSLPDWIAKPDFVDLSYNNFTITNFEQQTCQQGTVNLFASSLKGNRLGNISCMENYQCPKTWYSLYINCGGKSITVDGNKTYDDDSNEMGPARYRQIGENWALITAGHFFDSGRPDYYTWSNTTKLAVDNDDPKLYMDARVSPNSLTYYGFCLGNGNYIVKLHFAEIMFSDDKTYSSIGRRVFDIYIQRKLVSKDFDIVKEAGGVGKAVIETFTASVTSNALEIRLYWAGKGTTTIPFGSVYGPLISAISVNSDFTPPSENSRSIPAGGVAAIVAAAIVIILIISIMWWKGCLRLKCFGSRERKGLASQTGLFTLRQLKAATNNFDESFKIGEGGFGPVYKGVLFDGPIVAIKQLSSKSTQGSREFINEIGMISTLQHPNLVKLYGFCMEDDQLLLIYEYMENNSLAHALFAKKEDLENHQLRLDWKTRKRICIGIAKGLAYLHGESKIKIIHRDIKATNVLLDKDLNPKISDFGLAKLNEDDKTHMNTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVILEIVSGNNNTVSHPQEECFSLLDWARLLKEKDNLMELVDRRLGEDFKKEEVTMMINVALLCTSFSPSLRPSMSSVVSMLEGKTNVQEVVAESTEVLDDKKYKVMQQYYKYRGENSTSEAGSQSIATDESNTFIYDTDSSYLEPRN* 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1606 1004 SUPERFAMILY L domain-like 82 359 - -
Mtr8g1606 1004 Gene3D Ribonuclease Inhibitor 208 404 IPR032675 -
Mtr8g1606 1004 SUPERFAMILY Protein kinase-like (PK-like) 646 939 IPR011009 -
Mtr8g1606 1004 Pfam Malectin domain 402 587 IPR021720 -
Mtr8g1606 1004 Pfam Protein kinase domain 666 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1606 1004 Gene3D Ribonuclease Inhibitor 29 207 IPR032675 -
Mtr8g1606 1004 Gene3D - 405 592 - -
Mtr8g1606 1004 CDD STKc_IRAK 669 940 - -
Mtr8g1606 1004 Pfam Leucine rich repeat 277 337 IPR001611 GO:0005515
Mtr8g1606 1004 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 289 346 - -
Mtr8g1606 1004 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 384 960 - -
Mtr8g1606 1004 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 76 289 - -
Mtr8g1606 1004 ProSiteProfiles Protein kinase domain profile. 663 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1606 1004 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672|GO:0006468
Mtr8g1606 1004 SMART serkin_6 663 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1606 1004 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 289 346 - -
Mtr8g1606 1004 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 384 960 - -
Mtr8g1606 1004 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 76 289 - -
Mtr8g1606 1004 Gene3D Transferase(Phosphotransferase) domain 1 739 965 - -
Mtr8g1606 1004 Gene3D Phosphorylase Kinase; domain 1 634 738 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1606 Mtr-Chr8 23361359 23372781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1606 19 972 Receptor kinase-like Gene Family AT1G53420 52.966 0.0 977
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g1606 PK_Tyr_Ser-Thr 6.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1606 - - ccaj:109799273 1358.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1606 8 23361359 23372781 Mtr8g1606 8 23361359 23372781 ECH