Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1579 ATGAGTTCCATCAAAATCCTCTCCACAACTACAATACATGCATCAAATCATAATCTTTCTGACTCAACTTATCATACAATCCATCTAACCCCATGGGATCTACAATTCCTCCCATTTGGATTCAACCAAAAGGGGCTTCTTTATCAACATCCTTTCGAATTAGATAGAACAAATCAAATCCAACACCTTAAAGACTCTCTTTCTTCTACCCTTGATATTTTTTGGCCCTTCACAGGTCGTCTCAAGATAACAACAGAACACGAAGCTAATACAATTTCGTGTTCCATCGTGTGCAACAACGAAGGTGCACTCTTTGTTCACGCCGTAGCGAAAAACATCAGTGTTGCTGACATAGTTAGACCCACTTATCATCCTCCTATTCACCATTCATTTTTTGCACTAAATGGAGTTAAAAACTACGAAGGAACATCACAACCATTACTTGCAATCCAAGTAACGGAGTTAGTTGACGGCATCTTCATTGGCTTCACAGTTAACCACGTGATTGTTGATGGTACGTCGTTTTGGCATTTCATCAATTCGTGGGCTGAAATCTCGAAAGGTTGTCTTAAAATATCCAAACTTCCAACATTTGATCGTTGGTTTTCGAAAGGTATTGAATGTCCCATTAGATTTCCTTTCACGATAGAGTCACGATATAATGATAATGATGAAGAAGGAAAAATCAACTTTCCAGAGAGAGTATTTCATTTCAAAAAGGAGAGTATCGCAAAACTAAAATTCAAAGCAAACTTAGAGGTTGGTACAAAAAATATATCTTCCTTGCAAGCAATTTTCACTCACATTTGGCGCTCTATTATACGTTGCAAAAAACTTGACCCACAAGCAGAAGTGAAATTCGTGCTGGATATTGGAATTAGACCAAGGTTGATTCCTCCGTTGCCTGAGGATTATTTTGGTAATGCTGTGATAGATTGTGTTGTTAGCATCAGAGCCGATGACTTGTTGAAAGACGGTGGGCTTGGTAAGGGCTCTTTGGAGATGAACAAGATGATTGTTTTGCACTCTGATGAGAGGTTGAAAAATCACTATGAAAATTGGTTAATAACACCGAGTTTTGTCACCTCTGGTATGGCCAACAGTGATTCATTGGTCATTGGTGGTTCTCCTTGGTTTGATGTTTATGGTAATGATTTTGGTTGGGGAAAACCTGTGGGGGTTCGAAGTGGGGGTTCAAATAAAAGAAATGGAAAGATTTATGTGTATGCAGGTGTAGAAGATGGTAGCATGGACCTTGAAGTATGTCTTCCTTGTGAAATTTTGGAGGCAATTAGAAATGATCCTGAGTTTATGGATGTTGTGTCCTACTAA 1332 0.3874 MSSIKILSTTTIHASNHNLSDSTYHTIHLTPWDLQFLPFGFNQKGLLYQHPFELDRTNQIQHLKDSLSSTLDIFWPFTGRLKITTEHEANTISCSIVCNNEGALFVHAVAKNISVADIVRPTYHPPIHHSFFALNGVKNYEGTSQPLLAIQVTELVDGIFIGFTVNHVIVDGTSFWHFINSWAEISKGCLKISKLPTFDRWFSKGIECPIRFPFTIESRYNDNDEEGKINFPERVFHFKKESIAKLKFKANLEVGTKNISSLQAIFTHIWRSIIRCKKLDPQAEVKFVLDIGIRPRLIPPLPEDYFGNAVIDCVVSIRADDLLKDGGLGKGSLEMNKMIVLHSDERLKNHYENWLITPSFVTSGMANSDSLVIGGSPWFDVYGNDFGWGKPVGVRSGGSNKRNGKIYVYAGVEDGSMDLEVCLPCEILEAIRNDPEFMDVVSY* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1579 443 Gene3D - 230 434 IPR023213 -
Mtr8g1579 443 Gene3D - 1 208 IPR023213 -
Mtr8g1579 443 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 440 - -
Mtr8g1579 443 Pfam Transferase family 4 438 - -
Mtr8g1579 443 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1579 Mtr-Chr8 22441565 22443074 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1579 61 426 Monolignol Biosynthesis Gene Families AT5G48930 27.907 7.69e-31 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1579 - - gmx:100500257 486.878